Microbacterium galbinum: KV396_14010
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Entry
KV396_14010 CDS
T10384
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mgab Microbacterium galbinum
Pathway
mgab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KV396_14010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgab03019
]
KV396_14010
03009 Ribosome biogenesis [BR:
mgab03009
]
KV396_14010
Enzymes [BR:
mgab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KV396_14010
Messenger RNA biogenesis [BR:
mgab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KV396_14010
Ribosome biogenesis [BR:
mgab03009
]
Prokaryotic type
rRNA helicases
KV396_14010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
HEM4
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UPL16213
LinkDB
All DBs
Position
complement(2909966..2911795)
Genome browser
AA seq
609 aa
AA seq
DB search
MLTDAPEDSPATPGFEDLGITGPVLKAIRDLGYETPSPIQAATIPTLLAGRDVVGMAQTG
TGKTAAFALPVLERLDVSQKTPQALVLAPTRELALQVCEAFESYASKMKGVHVLPVYGGQ
GYGVQLSALRRGVHVVVGTPGRIMDHLAKGTLDLSELQYLVLDEADEMLKMGFAEDVEQI
LAQTPEEKQVALFSATMPPQIRRLAQKYLRDPEEISIKSKTATGTNITQRYLVVSYAQKV
DALTRILEVENFDGMIVFVRTKNETETLAEKLRARGYSAAAINGDVPQVQRERSVNQLKD
GKLDILVATDVAARGLDVERISHVINFDIPTDTESYVHRIGRTGRAGRTGDAISFITPRE
RYLLKHIEKATRQEPTQMQLPTTEDVNTTRLTRFDDAITAALGDAARIESFRDVVAHYVR
NHDVPEGDVAAALAIVAQGDTPLLLDPADDPLAKAVAADNRPPRERNARDSREPRTERRG
RGDYAAYRIEVGRRHRVEPRQIVGALANEGGLGRDDFGAINIRPDFSIVELPANLDPAVL
EKLSSTRISGQLIEIKPDRGPGARRGGPREGGARFDRRDRDDRPRRNDDSRPPRGDREEK
PFRKPRHKN
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtgctgaccgacgcccccgaggactcccccgcgacccccggattcgaggatctcggcatc
accgggcccgtcctcaaagccatccgtgacctcggctacgagaccccgtcgcccatccag
gcggccaccatcccgacgctcctcgcgggtcgcgacgtcgtcggcatggcgcagaccggc
acgggaaagaccgcggccttcgcgctgcccgtcctcgagcgtctcgacgtctcgcagaag
acgccgcaggccctcgtgctcgccccgacccgcgaactcgcgctccaggtgtgcgaggca
ttcgagtcgtacgcctcgaagatgaagggcgtccacgtgctgcccgtctacggcggccag
ggctacggcgtccagttgtcggctctccgccgcggcgtgcacgtggtggtcggtaccccc
ggccgcatcatggaccacctcgctaagggcacgctcgacctctccgagctgcagtacctc
gtgctcgacgaggccgatgagatgctcaagatgggcttcgcggaagacgtcgagcagatc
ctcgcgcagacgcccgaagagaagcaggtcgccctcttctccgccacgatgccgccgcag
atccgccgtctggcgcagaagtacctgcgcgatcccgaagagatcagcatcaagtcgaag
accgcgaccggcacgaacatcacccagcgatacctggtggtgtcctatgcgcagaaggtc
gatgcgctgacccgcatcctcgaggtcgagaacttcgacggcatgatcgtcttcgtccgc
accaagaacgagaccgagacgctcgccgagaagctgcgtgcgcgcgggtactcggccgcg
gcgatcaacggcgacgtgccgcaggtgcagcgcgagcgcagcgtcaaccagctcaaggac
ggcaagctcgacatcctcgtcgccaccgatgtcgccgcgcgcggcctcgacgtcgagcgc
atcagccacgtcatcaacttcgacatcccgaccgacacggaatcgtacgtgcaccgcatc
ggtcgcaccggccgtgccggtcgcaccggtgacgcgatcagcttcatcactccgcgtgag
cgctacctcctcaagcacatcgagaaggcgacgcgtcaggagccgacgcagatgcagctc
ccgaccacggaagacgtcaacaccacgcgcctcacccggttcgacgacgcgatcaccgcc
gctctcggagacgccgcccggatcgagtcgttccgcgatgtggtcgcccactacgtccgc
aaccacgacgtccccgagggcgatgtcgccgcggccctcgcgatcgtcgcccagggggac
actcccctgctgctcgacccggcggacgaccctctcgcgaaggccgtcgccgccgacaac
cgcccgccgcgcgaacgcaacgcgcgcgactcccgcgagccccgcaccgaacgccgcggg
cgtggcgactacgccgcctaccgcatcgaggtcggccggcgccaccgtgtcgagccgcga
cagatcgtcggcgcgctcgcgaacgagggcggcctcggacgcgacgacttcggggcgatc
aacatccgccccgacttctcgatcgtcgagcttcccgcgaacctcgacccggccgttctc
gagaagctgagcagcacacgcatctcgggccagctcatcgagatcaagccggatcgtgga
ccgggtgcgcgacgcggcgggccgcgtgagggcggcgctcgcttcgaccggcgcgaccgt
gacgatcgtccgcgccgcaacgacgacagccgtccgccgcgtggcgaccgcgaggagaag
ccgttccgcaagccgcggcacaagaactga
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