Mycoplasmoides gallisepticum CA06_2006.052-5-2P: HFMG06CAA_1704
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Entry
HFMG06CAA_1704 CDS
T02326
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta' (RNAP subunit beta')
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mgac
Mycoplasmoides gallisepticum CA06_2006.052-5-2P
Pathway
mgac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mgac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HFMG06CAA_1704 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgac03021
]
HFMG06CAA_1704 (rpoC)
03400 DNA repair and recombination proteins [BR:
mgac03400
]
HFMG06CAA_1704 (rpoC)
Enzymes [BR:
mgac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HFMG06CAA_1704 (rpoC)
Transcription machinery [BR:
mgac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HFMG06CAA_1704 (rpoC)
DNA repair and recombination proteins [BR:
mgac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HFMG06CAA_1704 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
SHOCT
Acyl-ACP_TE
Motif
Other DBs
NCBI-ProteinID:
AFP80375
LinkDB
All DBs
Position
288168..292028
Genome browser
AA seq
1286 aa
AA seq
DB search
MDKLNKKNKNKRIRGLQISIASAEEMRSWSHGEVKKPETINYKSLKPETDGLFDEAIFGP
VKDFECACGKYKKIKHRGRTCEKCGVEITESIVRRERMGHIDLAVPVAHIWMTKELPSPS
KISLVLDVSYKEVEEVVYFVNYIILNPGNSKNPVFKFKEVVDLSGKGSKSARIKLRKVLR
EIKDKHQADKHSIIYKRASDYYNKLKESHLPFSIDEVAKFIETHTGIRLGIGAEAILELL
EGVDLQKEYDLINEELNSYSKDLKANKEDQKVKRALRRLETIKWLKESGIKASNMILKVI
PVTPPDTRPIIQLDGARFTTSDINNFYRRIIIRNERLKKIIELRAPSVILNNEKRMLQEV
VDALFDNASRKKPITAKDKRPLKSLTDRLKGKQGLFRQNLLGKRVDYSGRSVIVIGPELK
MYEVGIPAPMILKLFKPFIIRELIMRFNEDGQEIKPIAPNIKIAEQMIAQKSERIWDIVD
KVIKERPVLLNRAPTLHRLGIQAFEPKIVDGKAIRLHPLVTTAFNADFDGDQMAVHVPIS
KEAVAEARAIMLASWHILGPKDGKPVATPTQDMVLGNYYLTTEKRNEKGEGLIFSDFDQV
ILAYEAKQVSIHALIGLSTKCLTKKPFAKQGIVITTVGKAIMNSIMPEEMAYLNDGDNLL
ELDESNIVFAGEDFKQKLAKRPLYKPFGKKTLSKIIEILYKNFPLQKVPQVLDKIKEFGF
KYSTLSSTTISVFDIPRYDNKQEYITKANEMIAKLKHMYQKGLLTDDERYTKVIRLWADV
KDNVSRDIKEIITRPEYKENSIVVIADSGARGNISNFTQLFGMRGLMSKSYNYDQKIKSQ
VIRDTIEVPIKHSFIEGLTINEYFNSSYGARKGMTDIAMKTSKSGYMTRKLVDAAQEVII
NDSDCNTNKGIVVSTITNSLDGGVVETLSERIVTRYTIDPIYDEKTKELLVDADTLITSE
LAEKIAKANVTKALIRSPIYCQSTKGLCQKCFGNDLTTNDLVQIGTAIGVIAAQSIGEPG
TQLTMRTFHIGGTANEGNITQGFERLKQIFDVVSPKEWELATIAENEGVVESITSDATAR
IIRIKTRLEAEEYRVPFDAVISVNPKDVVYPGSKLTEGSIDIKHLLRVAGIETVRQYFLE
EVQKVYRLQGIEIADKYVEVTIRQLTNKLQVIDVGDSDYFVGQTVDINKFRKEVTNMLIA
NKRPPVAINQVFGLDEAPAKTGSFLSAASFEDTKKILTDAAVKNQIDYLVGLKENVILGN
LIPAGTGFMSSEEIIKAGEEALEKEY
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atggataagctaaacaaaaaaaataaaaataaacgaattcgtggtttgcaaatctcgatt
gcttcagctgaagagatgagatcttgatctcatggtgaagtaaaaaaacctgaaacaatt
aactataaatcattaaaacctgaaactgatggtttatttgatgaagcaatctttggacct
gtcaaagactttgaatgtgcttgtggtaaatataaaaagatcaaacaccgtggtcgtact
tgtgaaaaatgtggtgttgagattactgaatcaatcgtaagaagagaacgaatgggtcat
attgatcttgctgttccagtagctcacatctgaatgactaaagaattaccttcaccttca
aagatctctttagtattagatgtttcttataaagaagttgaagaggtagtttactttgta
aactacattatcttaaacccggggaattcaaaaaacccggttttcaagtttaaagaagtt
gtcgatctatctggtaagggctctaaatctgccagaattaagttacgtaaagttttacgt
gaaattaaagataagcaccaagctgataaacattcaatcatttataaacgcgcatcagat
tattacaacaaactaaaagagtcacacctaccgttttcaatcgatgaagttgctaaattc
attgaaacacacacaggaattagattagggatcggtgctgaagcgatcttagaactatta
gaaggtgttgatctacaaaaagaatatgacttaattaatgaagaattaaattcatattca
aaagatttaaaagctaataaagaagatcaaaaagttaaaagagcactacgtcgtttagaa
acgattaagtgattaaaagaatctggaatcaaagcatctaatatgatcttaaaagtgatt
ccagttaccccacctgacactagaccgatcatccaattagatggggcgcgctttactact
agtgatattaataacttctatcgccgaatcattattcgtaatgaacggttaaagaagatt
attgaactacgtgcaccttctgttattcttaataatgaaaaaagaatgcttcaagaagtg
gttgatgcattatttgataatgcttcaagaaaaaaaccgattactgcaaaagacaagcgt
ccacttaaatcattaactgatcgcttaaaaggtaaacaaggtttattcagacaaaaccta
ttaggtaaacgggtagactattctggtcgttcagtaattgtgatcggtcctgaacttaag
atgtatgaagtaggaattcctgctcctatgatcttaaagttgttcaaaccattcattatt
cgcgaactaattatgcgctttaatgaagatggtcaagagatcaaaccgatcgcaccaaac
attaagattgctgaacagatgatcgcccaaaaatctgaacgaatttgggatatcgttgat
aaggtaattaaagaaagaccagtattacttaatcgggcgccaacattacaccgattaggg
atccaagcttttgaacctaagattgttgatgggaaagcaatccgcttacacccattagta
acaactgcttttaacgctgactttgacggtgaccagatggctgttcacgtgccaatttct
aaagaagcagttgctgaagctagagcaattatgttagcttcttgacatatcttagggcca
aaagatggtaagccagtagctactccaacccaagatatggtattaggtaactactactta
accactgaaaaacgtaatgaaaaaggtgaagggttaatcttctcagactttgatcaagta
atcttagcttatgaagctaaacaagtatcaattcacgctttaattgggttatcaaccaaa
tgtttaacaaaaaaaccatttgctaaacaagggatcgtaattacaactgttggtaaagcg
atcatgaactcaattatgcctgaagagatggcttatctaaacgatggtgataatttatta
gaacttgatgaatctaatatcgtttttgctggtgaagatttcaagcaaaaactagctaaa
cgcccactttacaaaccattcggcaaaaaaacattatctaagattattgagattctttat
aagaatttcccacttcaaaaagtgccacaagttcttgataagatcaaagaatttggtttc
aaatactcaacactatcatcaacaacaatctcagtctttgatatcccaagatatgataac
aagcaagaatacattactaaagctaatgagatgattgctaagctaaaacacatgtatcaa
aaaggattactaactgatgatgaacgttatacgaaagtaattcgtttatgagctgatgtt
aaagataatgtatctagagatattaaagagatcattacccgtcctgagtataaagaaaac
tcaatcgtggtgattgctgactctggtgctagaggtaatatctcaaacttcactcagtta
tttgggatgagaggattgatgtctaagtcatataactatgaccaaaagatcaaatcacaa
gtaatccgtgatacgattgaagttccaattaaacactcgtttattgaaggattaacgatt
aatgaatacttcaactcttcttatggggcacgtaaggggatgactgatattgcgatgaag
acatcaaaatctggttatatgactagaaaattagttgatgcagcgcaagaagtgatcatt
aatgattctgactgtaacaccaataagggaatcgtggtatcaacgattaccaactcttta
gatggtggggtcgttgaaactttaagtgaaagaatcgttactagatatacgatcgaccca
atttatgatgaaaaaactaaagaactattagttgatgctgatacactaattactagtgag
ttagctgaaaagattgctaaagcaaacgtaactaaagcactaattcgttcaccgatttac
tgccaatcaactaaagggttatgtcagaagtgttttggtaatgacttaactacaaacgac
cttgttcagattggaactgcgatcggggtgattgctgcgcaatcaatcggtgaaccagga
actcagttaacaatgagaacgttccacattggtggtacggcaaatgaaggtaatattact
caagggtttgaacgactaaaacagatctttgatgtagtctcaccaaaagaatgagaatta
gctacgattgctgaaaatgaaggggttgttgaatcgatcacttcagatgcaactgctaga
atcattcgcattaaaaccagattagaagctgaagaataccgtgttccgtttgatgctgta
atctcagttaaccctaaagatgttgtgtacccaggttctaaactaactgaaggttcgatc
gacatcaagcacttgttacgggttgctgggattgaaacagtaagacagtacttcttagaa
gaagtgcaaaaagtttatcgtttacaagggattgaaattgctgataagtacgttgaagta
acgatcagacaattaacaaacaaacttcaagtaatcgatgttggtgattctgattatttc
gtgggtcaaactgttgatatcaacaaatttagaaaagaagtgacgaatatgttaatcgcc
aacaaacgcccaccagtagcaattaaccaagtatttgggttagatgaagctccagctaag
actggttcattcctatcagcagcttcattcgaagacaccaaaaagatccttactgatgct
gctgtaaaaaatcagattgactacttagttggtctgaaagaaaacgtgatcttaggtaac
ttaattccagctggtactggatttatgagttctgaagagatcattaaagctggtgaagaa
gctttagaaaaagaatattaa
DBGET
integrated database retrieval system
