Mycoplasmoides gallisepticum CA06_2006.052-5-2P: HFMG06CAA_3018
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Entry
HFMG06CAA_3018 CDS
T02326
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mgac
Mycoplasmoides gallisepticum CA06_2006.052-5-2P
Pathway
mgac03420
Nucleotide excision repair
mgac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mgac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HFMG06CAA_3018 (uvrD)
03430 Mismatch repair
HFMG06CAA_3018 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgac03400
]
HFMG06CAA_3018 (uvrD)
Enzymes [BR:
mgac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HFMG06CAA_3018 (uvrD)
DNA repair and recombination proteins [BR:
mgac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HFMG06CAA_3018 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HFMG06CAA_3018 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_12
GpA_ATPase
DEAD
DUF7084
IZUMO
ResIII
Motif
Other DBs
NCBI-ProteinID:
AFP80504
LinkDB
All DBs
Position
complement(504488..506743)
Genome browser
AA seq
751 aa
AA seq
DB search
MQDYLKSLNKQQYDVVTSDLIPIFVVAGAGTGKTKVLTSRIAYLIEHFKIPEYKILAITF
TNKAAKEMQHRLEKLLDKEKTQVSFRTFHGFCAQVLREEVNNVDRLNDRFNILDEVDQAK
LIEDLLKSQKYEYYYSQYTDFKKNKVMSIINDAKTYNLDVAEFLASDLNKLGEDHILTPN
LVQPLSNFYHDYEKALKELNAIDFNDLLNIAYNLFLNDPIILKKWQNRYEAILVDEFQDA
NEIQYKIVKLLREKNNNFLFVGDPDQSIYGWRGANSEIGDSIRFDFNDLVVKYLTQNYRS
KQSILNLANDAIKMNNSRYFKSLLSHDLTDLGPKPIWINFSNIEYQNRFVMDKIKELVAS
KQYTYGDFAILYRTNFSSVSLERLIKENRIPYEIFGGYKFFLRKEIKDLIGYLKLVDTND
DIAFDRIINTPRRMIGDTSIEIIKELANKKSITEYEALDYLDESNIKANVKKSAQNFKKM
IEDLRANQGNWSVYQTINEIIKRINYYDYLNEPTKHDSVNEFIDFLNKYEKEYENDFGTK
LTINDFIQNLALEGDLDNNQPNHNKNALKLMTIHSAKGLEFKNVFVINMNENILPSSRSI
AATNNKAKLAEERRIVYVAYTRAKHNLWLCSNQDYDARTKEPYQPSRFLYELSDLVLDKQ
DQAKTYFDKHNFLTDDDGWFNSKKSPSKLDAWNSTNEVEHNYFVGEIIYHQLYGEGIVRE
IDDLTIKVSFKDKKAGTKDLIKNHKLITYAK
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgcaagattacttaaagtctttaaacaaacaacaatatgatgttgttacaagtgattta
attccaatttttgttgtcgctggtgctggtactggtaagacaaaggttttaacatcacga
attgcttatttgattgagcatttcaagatcccagaatataagatcttagcgattacattt
actaataaagctgctaaagagatgcaacaccgacttgaaaaacttctggataaagaaaaa
actcaagtcagttttagaacgtttcatgggttttgtgcccaagttttacgagaagaagtt
aataatgttgatcgtctgaacgatcggtttaatatcttagatgaagttgatcaagctaag
ttgatcgaagatctattaaaatcgcaaaaatacgaatattattattctcagtatactgat
ttcaaaaagaataaggtgatgagcatcattaatgatgcaaaaacttataacctagatgta
gctgaatttttagcatctgatttaaataaattaggtgaagatcacattcttactcccaat
ctagttcaaccattaagcaatttctatcatgattatgaaaaggcattaaaagagcttaat
gcgattgattttaatgatctattaaatattgcttataacctatttttaaacgatccaatt
attttaaaaaaatggcaaaaccgttatgaagcaattttagtagacgaatttcaagatgct
aatgaaattcaatacaagatcgttaaattattaagagaaaaaaataataattttttattt
gtgggtgaccctgatcaatcaatctatggttgaagaggtgctaatagtgagatcggtgat
tcaattagatttgattttaatgatttagttgttaagtatttaacgcaaaattaccgatca
aaacaaagtattttgaatctggcaaacgacgcaattaagatgaataatagtcgttatttt
aaatcattattatcacacgatttaactgatttagggcctaaaccaatttgaattaatttt
agtaatatcgaatatcaaaaccggtttgtaatggataagattaaagaactggttgcttct
aaacaatatacttatggtgattttgctatcttataccgaactaattttagttcggtatcg
ctagaacgcttaattaaggaaaaccggatcccttatgagatctttggtgggtataaattc
tttttaagaaaagagatcaaagatctaattggttatcttaaattagttgatactaatgat
gatatcgcgtttgatcgaatcatcaatacacctagaagaatgattggtgataccagtatt
gaaataattaaagaactagccaacaaaaaatcaatcactgaatacgaagcgctggattat
ttagatgaatcaaatatcaaagcaaatgttaaaaaaagcgcgcaaaacttcaaaaaaatg
attgaagatttacgagcaaaccaaggtaattgatcagtttatcaaacaatcaatgagatc
attaaacgaattaattattatgattatcttaatgaaccaactaagcatgatagtgtcaat
gaattcattgattttttgaataaatatgaaaaagaatacgaaaacgattttggcaccaaa
ttaacgattaatgactttatccaaaatcttgcactagaaggtgatcttgataacaatcaa
ccaaaccataataagaacgcattaaaattaatgacgattcacagtgcaaagggattagaa
ttcaagaatgttttcgtcattaatatgaatgaaaacattctacctagtagtcgttcaatt
gcagcaactaacaataaagctaaattagcagaagaaagaagaattgtttatgttgcttac
actagagccaaacacaatctttgattatgttcaaaccaagattatgatgctaggactaaa
gaaccttatcaaccttctagattcttatatgaattaagtgatctagtgcttgataaacaa
gatcaagctaaaacttattttgataaacataatttcttaacagatgatgatggttgattc
aattcgaagaaatcaccatctaagttagatgcatggaattcaactaatgaagttgaacac
aattattttgttggagagattatttatcaccaactttatggtgaagggattgttagggag
attgatgatctgacaatcaaagttagttttaaagataaaaaggctggaacaaaagatctg
attaaaaaccataaactaattacctatgcaaagtaa
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