Mycolicibacterium gadium: MGAD_00620
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Entry
MGAD_00620 CDS
T07053
Name
(GenBank) hypothetical protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mgad
Mycolicibacterium gadium
Pathway
mgad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MGAD_00620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgad03019
]
MGAD_00620
03009 Ribosome biogenesis [BR:
mgad03009
]
MGAD_00620
Enzymes [BR:
mgad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
MGAD_00620
Messenger RNA biogenesis [BR:
mgad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MGAD_00620
Ribosome biogenesis [BR:
mgad03009
]
Prokaryotic type
rRNA processing factors
MGAD_00620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
BBZ15727
UniProt:
A0A7I7WFW5
LinkDB
All DBs
Position
54367..57132
Genome browser
AA seq
921 aa
AA seq
DB search
MADDAHTEALSEESQPAEDVQPQTLTVESPAEADPGAGADAVADVAPEDVDAQEIGDGES
EDTAAEPPPDPSGDDEAIAETAQQHVPEHAHYQPLFMAPQPIRVEYDSEDDDDDDDEDND
DSGSDSDDEQSDRPSGRRRRRGRRGRGRGRGEQNGDDSDEGESDGRSQDSGDDSDDSDDS
DDSDDDSGDDDSAGGEGGTRRRRRRRRRKSGSGDDSDGGSSDDPPNTVVHEREPRKSGRG
DKSGKSGDGEIQGINGSTRLEAKRQRRRDGRDAGRRRPPILSEAEFLARREAVERMMVVR
DKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIYLGIVQNVLPSMEAAFVD
IGRGRNGVLYAGEVNWEAAGLGGAARKIEQALKPGDYVVVQVSKDPVGHKGARLTTQVSL
AGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVIIRTASEGVKEEDIRTDV
NRLQERWTQIEERAAETKKKAAGAAVALYEEPDVLVKVIRDLFNEDFSGLIVSGDEAWNT
INEYVNSVAPELVPRMNKYETAGPDGPDVFAVHRIDEQLAKAMDRKVWLPSGGTLVIDRT
EAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLRLRDIGGIVVIDFIDMVLESN
RDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKKLGTGLIEAFSTTCTECAGRGILLH
GDPVDSTSNGGRKAETSGRRGKRGKRGAKTEDVPVAKVPSHPAGEHPMFKAMAAANGRHE
DDEDETESETSPEEVAEVDSETIREAVAETAEEDFDDTDDDTDEDSDDESDEDDIDLDDD
EDDEDDDDIEVIGADSDDDSDDDEDDDEDSDDDEDFEDDEDSDDEDDEDFEEPEPAQVVV
PAGRHRRRAAARPAGPPINED
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
gtggccgacgatgcccataccgaagccctatcagaagaatcgcagcccgcggaggatgtt
cagccccagacgctgaccgtcgagtcgcccgctgaagccgatcccggcgccggcgcggac
gctgtcgccgacgtcgcccctgaggacgtcgacgcgcaggagatcggggacggcgagtcc
gaggacaccgccgccgagccgccacctgaccccagcggcgacgacgaggcgatagcggag
acggcccagcagcacgtgcctgagcacgcccactaccagccgctgttcatggcgccccag
ccgattcgggtcgaatacgactccgaggacgacgacgatgacgacgacgaagacaacgac
gactccggctcggactccgacgacgagcagtctgatcggccgtcgggtcggcgccgacgc
cgcggccgtcgtggccgtggacgcggccgcggcgaacagaacggtgacgattccgacgag
ggtgagtccgacggtcgcagccaggactccggcgacgattcagacgactccgacgattcc
gatgattccgacgacgacagcggcgatgacgacagcgcgggcggcgaaggcggaacacgt
cgccgtcgccggcgccggcgccgcaagtccggctccggggacgacagcgacggcggatcc
tcggacgacccgccgaacaccgtggtccacgagcgcgagccgcgtaagtccggccgcggc
gacaagtcaggcaagtccggcgacggcgagattcagggcataaacggatcgacccggctg
gaagccaagcggcagcgccgtcgcgacggacgcgacgccggccgccgccggccgccgatc
ctgagcgaggcggagttcctcgcccggcgcgaagccgtcgagcggatgatggtcgtgcgc
gacaaggtccgcaccgaaccaccacacgagggtgcgcgctacacgcagatcgcggtactc
gaagacggcgtcgtcgtcgaacatttcgtgacgtcggcggcgtcggcatcgctggtcggc
aacatctatctgggcatcgtgcagaacgtgttgccgtcgatggaggccgcgttcgtcgac
atcggccgcggtcgcaacggcgtgctctacgcaggcgaagtgaactgggaggcagcgggt
ctcggcggcgcagcccgcaagatcgagcaggctctcaagcccggcgactatgtcgtcgtg
caggtcagtaaggacccggtcgggcacaagggcgcccggttgaccacgcaggtttcgctg
gccggccggtacctcgtctacgtgccaggcgcatcgtccaccgggatcagccgcaagttg
ccagacaccgaacggcagcggctcaaggagatcctgcgcgaggtcgtgccgtccgatgcg
ggcgtgatcatccgcaccgcgtcggaaggggtcaaagaagaggacatccgcaccgacgtc
aaccggttgcaggaacgctggacgcagatcgaggaacgagccgccgaaaccaagaagaag
gcggcaggcgccgcggtcgcgctctacgaagagcccgacgtgctcgtgaaggtcatccgc
gacctgttcaacgaggacttcagcggtctcatcgtctccggcgacgaggcctggaacacc
atcaacgaatacgtgaattcggtagcgcccgagctcgttccgcggatgaacaagtacgag
accgccggccccgacggccctgacgtgttcgccgtgcaccgcatcgacgagcagctggcc
aaggcgatggaccgcaaggtgtggctgccgtccggtggaacattggtcatcgaccgcacc
gaggccatgacggtggtcgacgtgaacaccggaaagttcaccggctcgggtggaaacctg
gagcagaccgtcacccgcaacaacctcgaggccgccgaggagatcgtccgccagctgagg
ctgcgcgatatcggcggcatcgtggtcatcgacttcatcgacatggttctggagtccaac
cgcgacctggtgctgcggcggctgaccgaagcactggcgcgtgaccgcacccggcatcag
gtttcggaggtgacgtcgctcggtttggtgcagctgacgcgaaagaagttgggcaccggg
ctgatcgaggccttctcgacgacctgcacggaatgtgccggcaggggaatcctgctgcac
ggcgaccccgtcgactccacctccaacggcggtcgcaaggccgagacgtccgggcgtcgg
ggcaagcgaggcaagcgcggcgccaagaccgaggacgtccccgtcgccaaggtgccctcg
catcccgccggcgagcatccgatgttcaaggcgatggccgcggccaatggtcggcacgag
gacgacgaagacgagacggaatcggagacctctcccgaggaagtcgccgaagtcgattcg
gagaccattcgtgaagccgtcgccgagaccgccgaagaggacttcgacgacacggacgac
gacaccgacgaagattcggatgacgagtccgatgaggacgacatcgacctggatgacgac
gaggacgacgaggacgatgacgatatcgaggtcatcggcgctgactccgacgacgactcc
gatgacgacgaggacgacgacgaggactccgacgacgacgaggacttcgaggatgacgag
gactccgatgacgaggacgacgaggacttcgaggagcccgaaccggctcaggtcgtcgtt
ccggccggtcggcaccgccgccgcgcggccgccaggcctgcgggaccacccatcaacgag
gactga
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