KEGG   Mycolicibacterium gadium: MGAD_05280
Entry
MGAD_05280        CDS       T07053                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
mgad  Mycolicibacterium gadium
Pathway
mgad03030  DNA replication
mgad03410  Base excision repair
mgad03420  Nucleotide excision repair
mgad03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mgad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MGAD_05280
   03410 Base excision repair
    MGAD_05280
   03420 Nucleotide excision repair
    MGAD_05280
   03440 Homologous recombination
    MGAD_05280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mgad03032]
    MGAD_05280
   03400 DNA repair and recombination proteins [BR:mgad03400]
    MGAD_05280
Enzymes [BR:mgad01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     MGAD_05280
DNA replication proteins [BR:mgad03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     MGAD_05280
DNA repair and recombination proteins [BR:mgad03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     MGAD_05280
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MGAD_05280
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 HHH_5 HHH_2 DNA_pol_lambd_f baeRF_family2 NYN_YacP
Other DBs
NCBI-ProteinID: BBZ16193
UniProt: A0A7I7WIA3
LinkDB
Position
543113..545821
AA seq 902 aa
MTASATTEKATEKPTLMLLDGNSLAFRAFYALPAENFKTQGGLTTNAVYGFTAMLINLLR
DEQPTHIAAAFDVSRQTFRLEKYPEYKAGRSATPDEFRGQIDITKEVLGALGITVLAEPG
FEADDVIATLATQAEDAGYRVLVVTGDRDSLQLVSDDVTVLYPRKGVSELTRFTPDAVLE
KYGLTPQQYPDFAALRGDPSDNLPGIPGVGEKTATKWIAEYGSLQTLVDQVDTVKGKVGD
ALRANLSSVVLNRELTDLVKDVPLAQTPDTLRMQPWDRDQIHRLFDDLEFRVLRDRLFDT
LASADPEVDQGFDVRGGALESGELAAWLAEHGSGKRFGMAVVGTHLAFDADATALAIVAA
DGDGRYLDTAVLQSDDEAALASWLADSSQPKALHEAKLAMHDLEGRGWKLAGVTSDTALA
AYLVRPGQRSFALDDLSLRYLKRELRADNPEQQQLSLLDDTDGVDEQAVQTVILRASAVM
DLADALDEELARIDSSALLGNMELPVQRALAEMESAGIAVDLKQLAELQSEFADQIRDAA
EAAYAVIGKQINLGSPKQLQVVLFDELEMPKTKRTKTGYTTDADALQSLFDKTGHPFLQH
LLAHRDATRLKVTVDGLLAAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTEAGRR
IRDAFVVGKGYAELMTADYSQIEMRIMAHLSKDEGVLEAFTTGEDLHSFVASRAFGVPID
EVTAELRRRVKAMSYGLAYGLSAYGLAAQLKISTEEAKEQMEQYFDRFGGIRDYLRDVVD
QARKDGYTSTVFGRRRYLPELDSSNRNVREAAERAALNAPIQGSAADIIKVAMINVDTAL
KDAELKSRMLLQVHDELLFEIADGERDAVEKLVREQMGSAYPLDVPLEVSVGYGRSWDAA
AH
NT seq 2709 nt   +upstreamnt  +downstreamnt
gtgaccgcgagcgcaacgaccgagaaggcgaccgaaaagccgacattgatgctgctggac
ggcaattcgttggcgttccgggcgttttacgcgctacccgcggagaacttcaagacccag
ggcggcctgaccaccaacgcggtgtacggcttcaccgcgatgctgatcaacctgctgcgc
gacgagcagcccacccatatcgccgcagcgttcgacgtgtcgcggcagacgttccgcctg
gagaagtaccccgagtacaaggcgggccggtcggccacccccgatgagttccgcggccag
atcgacatcaccaaggaggtgttgggcgcgctcggcatcactgtgctggccgagcccggc
ttcgaggccgacgacgtgatcgccacgctggccacgcaggccgaggacgcgggctaccgg
gtgctggtggtgacgggtgaccgtgactcgctgcagctggtcagcgacgacgtgacggtg
ctctacccgcgcaaaggcgtcagcgagctgactcggttcacccccgacgccgtgctggag
aagtacgggctgaccccgcagcagtatcccgacttcgcggccctgcgcggcgaccccagc
gacaacctgcccggcatcccgggtgtgggggagaagaccgccacgaagtggatcgccgaa
tacgggtcgctgcagacgctggtcgaccaggtggacaccgtaaagggcaaggtcggcgat
gcgctgcgggcgaatctgtcgtccgtcgtgctcaaccgcgaactcaccgacctggtcaag
gacgtcccactggctcagacgcccgacacgttgcggatgcagccgtgggatcgcgaccag
atccatcgcctgttcgacgacctcgaattccgggtacttcgcgacaggctgttcgacacg
ctggcctcagcggaccccgaagtcgatcagggcttcgacgtgcgcggcggcgccctcgag
tccggcgagttggcggcctggctggccgaacacggatccggcaagcggttcgggatggcc
gttgtcggtacgcatttggcattcgacgccgacgccaccgcgttggcgatcgtcgcggcc
gacggtgacggtcgctacctcgacaccgcggtgctgcagtccgacgacgaggccgcgctc
gcgtcgtggctggccgattcgagccaaccgaaggcattgcatgaggccaagctggcgatg
cacgatctcgagggtcgcggctggaagctcgccggcgtcacatccgacaccgcgctcgcc
gcctatctggtgcgcccgggtcaacgcagtttcgcgctcgacgacctgtcgctgcggtac
ctgaaacgtgaactccgcgcggataatcctgagcagcaacagctttcgctacttgatgac
accgacggcgttgatgagcaggctgtccagacggtgatcctgcgcgcgagcgcagtgatg
gacctcgccgacgctctggacgaggaactggcgcgcatcgactcgtcggcgctgctgggc
aacatggaactgccggtgcagcgggcgctcgcggagatggagtccgcgggcatcgccgtg
gatctgaagcaactggccgaactgcagagcgagttcgccgatcagatccgcgatgccgcc
gaagcggcgtacgcggtgattggcaagcagatcaatctcggttcacccaaacagctccag
gtcgtgctgttcgacgagttggagatgcccaagaccaaacggaccaagaccggctacacc
accgacgcggacgcgctgcagagtctcttcgacaaaacggggcatccgttcctgcagcat
ctgctggcgcaccgcgacgccacccgactcaaggtcaccgtcgacgggctgctggcagct
gtggccgcagacgggcggattcatacgacgttcaaccagacgatcgccgccacgggccgg
ctctcgtcgaccgagccgaacctgcagaacatcccgatccgcaccgaagcgggccgccgt
atccgggacgcattcgtcgtcggcaagggttacgccgagctcatgacggccgactacagc
cagatcgagatgcgcatcatggcgcacctctcaaaagatgaaggcgtgctcgaagccttt
actaccggcgaggacctgcattcgttcgtcgcatcacgggcgttcggcgtgccgatcgac
gaagtgaccgcggagctgcggcgccgggtgaaggcgatgtcgtacggcctcgcctacggg
ctgagcgcatacggcctggccgcgcagctgaagatcagcaccgaggaagccaaagagcag
atggagcagtacttcgaccggttcggtggcattcgcgattacctgcgcgacgtcgtcgat
caggcacgcaaggacggctacacgtcgacggtattcgggcggcgccgctacttgccggag
ctggacagcagcaaccgcaacgtacgcgaggccgccgaacgcgccgcgctcaacgcgccg
atccagggcagcgccgccgacatcatcaaggtcgcgatgatcaacgtcgacaccgccctc
aaggacgccgagctgaagtcgcgcatgctgctacaggtccacgacgagctgctgttcgaa
atcgccgacggtgagcgcgatgcggtcgagaagctggtccgcgagcagatgggttccgcc
tatccgctcgacgtgccgctggaggtgtccgtcggctacggccgaagctgggacgccgcg
gcccactag

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