KEGG   Mycobacterium gallinarum: MGALJ_08460
Entry
MGALJ_08460       CDS       T07342                                 
Symbol
rnj
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
mgau  Mycobacterium gallinarum
Pathway
mgau03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mgau00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MGALJ_08460 (rnj)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mgau03019]
    MGALJ_08460 (rnj)
Messenger RNA biogenesis [BR:mgau03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MGALJ_08460 (rnj)
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B_2 Lactamase_B RMMBL Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: BBY91177
UniProt: A0A9W4AZ78
LinkDB
Position
858172..859851
AA seq 559 aa
MNGELAPPGPLAPGGLRVTALGGISEIGRNMTVFEHLGRLLIVDCGVLFPTHDEPGVDLI
LPDLRLIQDRLDDVEALVLTHAHEDHIGAIPFLLKLRPDIPVVGSKFTLALVNEKCREHR
IKPVFEEVDEGQSSRHGVFECEYFAVNHSIPGCLAIAIHTGAGTVLHTGDIKLDQSPPDG
KPTDLPGMSRLGDSGVDLFLCDSTNAEIPGVGPSESEIGPNIHRLMRGAQGRVIVACFAS
NVGRVQQIIDAAVALGRKVSFVGRSMVRNMGIAKELGYLTLANDDDIIDIGAAETMAPER
VVLVTTGTQGETMAALSRMSRGEHRSITLTAGDLIIMSSSQIPGNEEAIFGVLDALAKIG
ARVVTNAHVRVHVTGHAYAGELLFLYNGVRPRNVMPVHGTWRMLRANAALATRTGVPEEN
IVLAENGVSVDLVAGRASVSGAVSTGKMFVDGLVLGDVGETVIGERLTLSSGFIGITVVL
RSGTGKLASAPQLHSRGFSEDPKSLEPATRKVEEALEALAAERVTDINRIAQAARRAVGK
WVGESYRRQPMIVPTVIEI
NT seq 1680 nt   +upstreamnt  +downstreamnt
gtgaacggagaactcgcaccgccggggccactggcccccgggggacttcgggtcaccgcg
ctgggcggcatcagcgaaatcggccgcaacatgacggttttcgagcatctgggccggctc
ctgatcgtcgactgcggtgtcctgttcccgacgcacgatgagcccggggtcgatctgatc
ctgcccgaccttcgcctgatccaggatcgtctggacgacgtcgaggcactggtgctcacc
cacgcgcacgaggaccacatcggtgccatcccgttcctgctcaagctgcgtcccgacatt
ccggtggtcggatcgaagttcacgctggcgctggtgaacgagaaatgccgcgaacaccgc
atcaagccggtgttcgaggaggtggacgagggtcagagctcgaggcacggcgtgttcgaa
tgcgagtacttcgccgtcaaccactccatcccgggctgtctggccatcgcgatccacacc
ggtgcgggcaccgtgctgcataccggcgacatcaagctcgaccagtcgccgcccgacggc
aagccgaccgatctgccgggcatgtcacgactcggtgattccggagtggacctgttcctg
tgcgactcgacgaacgccgagatccccggagtggggccctcggagagcgagatcggcccg
aacattcaccggctgatgcgtggggcacaggggcgcgtcatcgtggcctgcttcgcatcg
aatgtcggtcgcgtgcaacagatcatcgatgcggcagtggcgctgggccgcaaggtgtcg
ttcgtgggccggtcgatggtccgcaacatggggatcgccaaggagctgggctacctcacg
ctcgccaacgatgacgacatcatcgacatcggcgccgcggagacgatggctcccgaacgc
gtggtgctcgtgaccacgggcacgcagggcgaaacgatggccgcgctgtcgcggatgtcg
cgcggtgagcatcgcagcatcacgctgacggccggcgatctcatcatcatgtcgtcatcg
cagataccgggcaatgaggaagcgatcttcggcgtcctggatgccctggccaagatcggt
gcccgcgtggtgacgaatgcccatgtgcgcgtgcatgtcaccggccacgcctacgccggg
gaactgctcttcctctacaacggcgtccggccgcgcaatgtgatgccagtgcacggaacc
tggcggatgcttcgggccaacgcggcgctggcgacacgcaccggggtgcccgaggaaaac
atcgtgctggccgagaacggtgtcagcgtcgatctggtggcgggccgggcatcggtctcc
ggtgcggtgtcgacgggcaagatgttcgtcgacggactcgtcctcggggatgtcggcgag
acggttatcggtgaacggctcacgctgtcttcgggtttcatcggaatcaccgtcgtgctg
cgaagcggcaccggtaagctggcgtcggcgccgcaactgcactcgcgcggtttctcggag
gacccgaagtcgctggaacccgcgacgcggaaggtcgaggaagcgctggaagcccttgcc
gccgaacgggtgaccgatatcaaccgcatcgcccaggcggcacggcgggcggtcggcaag
tgggtcggcgagtcctatcgccgccagccgatgatcgtaccgacggtcatcgagatctag

DBGET integrated database retrieval system