Mycobacterium gallinarum: MGALJ_08460
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Entry
MGALJ_08460 CDS
T07342
Symbol
rnj
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mgau
Mycobacterium gallinarum
Pathway
mgau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MGALJ_08460 (rnj)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgau03019
]
MGALJ_08460 (rnj)
Messenger RNA biogenesis [BR:
mgau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MGALJ_08460 (rnj)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
BBY91177
UniProt:
A0A9W4AZ78
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Position
858172..859851
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AA seq
559 aa
AA seq
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MNGELAPPGPLAPGGLRVTALGGISEIGRNMTVFEHLGRLLIVDCGVLFPTHDEPGVDLI
LPDLRLIQDRLDDVEALVLTHAHEDHIGAIPFLLKLRPDIPVVGSKFTLALVNEKCREHR
IKPVFEEVDEGQSSRHGVFECEYFAVNHSIPGCLAIAIHTGAGTVLHTGDIKLDQSPPDG
KPTDLPGMSRLGDSGVDLFLCDSTNAEIPGVGPSESEIGPNIHRLMRGAQGRVIVACFAS
NVGRVQQIIDAAVALGRKVSFVGRSMVRNMGIAKELGYLTLANDDDIIDIGAAETMAPER
VVLVTTGTQGETMAALSRMSRGEHRSITLTAGDLIIMSSSQIPGNEEAIFGVLDALAKIG
ARVVTNAHVRVHVTGHAYAGELLFLYNGVRPRNVMPVHGTWRMLRANAALATRTGVPEEN
IVLAENGVSVDLVAGRASVSGAVSTGKMFVDGLVLGDVGETVIGERLTLSSGFIGITVVL
RSGTGKLASAPQLHSRGFSEDPKSLEPATRKVEEALEALAAERVTDINRIAQAARRAVGK
WVGESYRRQPMIVPTVIEI
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggagaactcgcaccgccggggccactggcccccgggggacttcgggtcaccgcg
ctgggcggcatcagcgaaatcggccgcaacatgacggttttcgagcatctgggccggctc
ctgatcgtcgactgcggtgtcctgttcccgacgcacgatgagcccggggtcgatctgatc
ctgcccgaccttcgcctgatccaggatcgtctggacgacgtcgaggcactggtgctcacc
cacgcgcacgaggaccacatcggtgccatcccgttcctgctcaagctgcgtcccgacatt
ccggtggtcggatcgaagttcacgctggcgctggtgaacgagaaatgccgcgaacaccgc
atcaagccggtgttcgaggaggtggacgagggtcagagctcgaggcacggcgtgttcgaa
tgcgagtacttcgccgtcaaccactccatcccgggctgtctggccatcgcgatccacacc
ggtgcgggcaccgtgctgcataccggcgacatcaagctcgaccagtcgccgcccgacggc
aagccgaccgatctgccgggcatgtcacgactcggtgattccggagtggacctgttcctg
tgcgactcgacgaacgccgagatccccggagtggggccctcggagagcgagatcggcccg
aacattcaccggctgatgcgtggggcacaggggcgcgtcatcgtggcctgcttcgcatcg
aatgtcggtcgcgtgcaacagatcatcgatgcggcagtggcgctgggccgcaaggtgtcg
ttcgtgggccggtcgatggtccgcaacatggggatcgccaaggagctgggctacctcacg
ctcgccaacgatgacgacatcatcgacatcggcgccgcggagacgatggctcccgaacgc
gtggtgctcgtgaccacgggcacgcagggcgaaacgatggccgcgctgtcgcggatgtcg
cgcggtgagcatcgcagcatcacgctgacggccggcgatctcatcatcatgtcgtcatcg
cagataccgggcaatgaggaagcgatcttcggcgtcctggatgccctggccaagatcggt
gcccgcgtggtgacgaatgcccatgtgcgcgtgcatgtcaccggccacgcctacgccggg
gaactgctcttcctctacaacggcgtccggccgcgcaatgtgatgccagtgcacggaacc
tggcggatgcttcgggccaacgcggcgctggcgacacgcaccggggtgcccgaggaaaac
atcgtgctggccgagaacggtgtcagcgtcgatctggtggcgggccgggcatcggtctcc
ggtgcggtgtcgacgggcaagatgttcgtcgacggactcgtcctcggggatgtcggcgag
acggttatcggtgaacggctcacgctgtcttcgggtttcatcggaatcaccgtcgtgctg
cgaagcggcaccggtaagctggcgtcggcgccgcaactgcactcgcgcggtttctcggag
gacccgaagtcgctggaacccgcgacgcggaaggtcgaggaagcgctggaagcccttgcc
gccgaacgggtgaccgatatcaaccgcatcgcccaggcggcacggcgggcggtcggcaag
tgggtcggcgagtcctatcgccgccagccgatgatcgtaccgacggtcatcgagatctag
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