Mycobacterium gallinarum: MGALJ_28180
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Entry
MGALJ_28180 CDS
T07342
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mgau
Mycobacterium gallinarum
Pathway
mgau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MGALJ_28180 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgau03019
]
MGALJ_28180 (deaD)
03009 Ribosome biogenesis [BR:
mgau03009
]
MGALJ_28180 (deaD)
Enzymes [BR:
mgau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MGALJ_28180 (deaD)
Messenger RNA biogenesis [BR:
mgau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MGALJ_28180 (deaD)
Ribosome biogenesis [BR:
mgau03009
]
Prokaryotic type
rRNA helicases
MGALJ_28180 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
HEM4
UvrA_inter
Flavi_DEAD
Transketolase_C
Motif
Other DBs
NCBI-ProteinID:
BBY93149
UniProt:
A0A9W4BIW0
LinkDB
All DBs
Position
complement(2896596..2898284)
Genome browser
AA seq
562 aa
AA seq
DB search
MTSPDPDENRVDLTFEDLQMHPSVLQAVNEVGYESPSAIQAATIPAMLKGSDVVGLAQTG
TGKTAAFAIPILSKIDTDSRTTQALVLAPTRELALQVAEAFSRYGAHLRVNVLPVYGGSS
YGPQLAGLKRGAQIVVGTPGRVIDHLEKGTLDLTHLDYLVLDEADEMLQMGFAEDVERIL
ADTPEYKQVALFSATMPPAIKKITSKYLHDPVEVTVKSKTQTAENITQRYVQVSHQRKMD
ALTRLLEVEQGDAMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQAVRERTINSLKDG
SLDILVATDVAARGLDVERISHVLNYDIPHDPESYVHRIGRTGRAGRSGTALLFVTPRER
HLLKSIERVTRQKLVEIDLPSVDDVNEKRVAKFLDSITAALNAPGIDLFRQLIEGYERDN
DVPMADIAAALALQSRDGEEFLMTEPPPEKRRERPDRGPREDGPRKPRERRGDFATYRIA
VGKRHKVMPGAIVGAIANEGGLHRSDFGHISIRPDHSLVELPAKLSRETMKALERTRIQG
ILINLQPDRPPRKGGKPGHKAK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcccccgacccggacgagaaccgggtagatctgaccttcgaggacctgcagatg
cacccttcggtgctgcaggccgtcaacgaggtcggctatgagtcaccgtcggccatccag
gccgcgacgattccggcgatgctgaaaggttcggacgtcgtcgggctggcgcagacgggc
accggcaagaccgcggcgttcgccatcccgatcctgtcgaagatcgacaccgacagccgc
accacccaggcgctggtgctggcgccgacgcgcgaactcgcactacaggtggccgaggcg
ttcagccggtatggcgcccacctgcgggtcaatgtcctgccggtgtacggcggatcctcg
tacggcccccaactcgccgggctgaagcgcggcgcgcagatcgtggtcggcaccccgggc
cgggtgatcgaccacctggaaaagggcacgctcgacctcacccacctcgactatctggtg
ctcgacgaggccgatgagatgttgcagatgggcttcgccgaggacgtcgagcgcattctg
gccgacacccctgagtacaagcaggtcgcgttgttctcggcgaccatgccgccggcgatc
aagaagatcacgtcgaaatacctgcacgacccggtcgaggtgacggtcaagtccaagacc
cagaccgccgagaacatcacgcagcggtatgtgcaggtgtcgcaccaacgcaagatggac
gcgctgacccgcctgctcgaggtcgagcagggcgacgcgatgatcgtgttcgtccgtacc
aagcaggccaccgaggaagtcgccgaaaagctgcgtgcgcgtggattttccgccgcggcg
atcaacggcgatattccgcaggcggtccgcgagcgcaccatcaactcgctcaaggacggc
agccttgacatcttggtggccaccgacgtggcggcacgcggcctggacgtcgaacgcatc
tcgcatgtgctcaactacgacatcccgcacgacccggagtcctacgtgcaccgcatcgga
cgcaccggtcgggcgggccgatctggtaccgcgttgttgttcgtcacacctcgagagcgc
catctgctcaagtccatcgagcgggtcacgaggcagaagctcgtcgagatcgatttgccc
tccgtggacgacgtcaatgagaaacgcgtcgccaaattcctggactcgatcaccgcggcg
ctcaatgcgcccggaatcgatctgttccgccagctgatcgagggctacgagcgcgataac
gatgtgcccatggcggatatcgccgcggcgttggctctgcagagccgcgacggcgaagag
ttcctgatgaccgagccgccgccggagaagcgtcgcgaacgccccgaccgcggtccgcgt
gaggacggtccgcgcaagccgcgcgagcggcggggtgatttcgcgacctatcgcatcgcg
gtcggcaagcgccacaaggtgatgccgggtgcgatcgtcggcgccatcgcgaacgagggt
ggcttgcaccgcagcgacttcgggcacatctcgatccggcccgaccactccctggtggag
ctgccggccaagctgtcccgcgaaacgatgaaagcccttgagcgcactcgcatacagggc
atcctgatcaacctgcaacctgatcgtccgccacgaaaaggcgggaaacccggccacaaa
gccaaatga
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integrated database retrieval system
