Mycobacterium gallinarum: MGALJ_54370
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Entry
MGALJ_54370 CDS
T07342
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mgau
Mycobacterium gallinarum
Pathway
mgau03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mgau00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MGALJ_54370 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgau03021
]
MGALJ_54370 (rpoC)
03400 DNA repair and recombination proteins [BR:
mgau03400
]
MGALJ_54370 (rpoC)
Enzymes [BR:
mgau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MGALJ_54370 (rpoC)
Transcription machinery [BR:
mgau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MGALJ_54370 (rpoC)
DNA repair and recombination proteins [BR:
mgau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MGALJ_54370 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Motif
Other DBs
NCBI-ProteinID:
BBY95768
UniProt:
A0A9W4FIG9
LinkDB
All DBs
Position
5485542..5489492
Genome browser
AA seq
1316 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRNWSFGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITAVDDEMRHNELSTLEAEMVVEKKAVEDQRDADLEARAQKLEAD
MKELEDEGAKSDVKRKVRDGGEREMRQLRDRAQRELDRLDEIWTTFTKLAPKQLIVDEVL
YRELIDRYGEYFTGAMGAEAIKKLIETFDIDAEAEELREVIRSGKGQKKLRALKRLKVVA
AFQSNSNSPLGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIGEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLYFLTTMIEGDTGEHQ
SSAKDKAEFGVYSSPAEAIMAMDRGSLSVRANIRVRLTQLRPPADIEAELFEDGWKPGDA
WTADTTLGRVLFNELLPTAYPFVNEQMHKKVQARIVNDLAERYPMIVVAQTVDKLKDAGF
YWATRSGVTVSMADVLVPPQKQEILERHELEADRIEKQYQRGALNHDERNEALVKIWQDA
TEEVGKALEAYYPEDNPIITIVKSGATGNLTQTRTLAGMKGLVTNPKGEFIPRPIKSSFR
EGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVRETDCETERGVNITL
AEMQDKTLVRDQHIETSAYARTLATDAVDAKGNVIVERGHDLGDPAIEALLAAGVTEVKV
RSVLTCATGTGVCAMCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGVSG
GSDIVGGLPRVQELFEARIPRDKAPIADVTGRVQLEEGERFYKITIIPDDGGEEVVYDKL
SRRQRLKVFKHDDGTERLLSDGDHVEVGQQLMEGSADPHEVLRVQGPREVQIHLVKEVQE
VYRAQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLTERGEFETENRRVVAEGGEP
AAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLQGLKENVIIGKLIPA
GTGINRYRNIQVQPTEEARAAAYTIPSYEDQYYSPDFGQATGAAVPLDDYGYSDYR
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
gtgctagacgtcaacttcttcgatgaactccgcatcggtcttgccaccgcggacgacatc
cgtaactggtccttcggcgaggtcaaaaagccggagaccatcaactaccgcacgctcaag
ccagagaaggacggcctgttctgcgagaagatcttcggaccgactcgcgactgggagtgc
tactgcggcaagtacaagcgtgtccgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtcactcgcgccaaggtgcgccgtgagcggatgggccacatcgagctggccgcgccc
gtcacgcacatctggtacttcaagggtgtgccgagccggctcgggtacctgctcgacctg
gcgcccaaggatctcgagaagatcatctacttcgcggcctacgtgatcacggccgtcgac
gacgagatgcggcacaacgagctgtccacgctcgaggccgagatggtcgtcgagaagaag
gccgtcgaggatcagcgcgacgccgacctggaggcccgggcgcagaagctcgaggccgac
atgaaggagctcgaggacgagggcgccaagtccgacgtcaagcgcaaggtgcgtgacggt
ggcgagcgcgaaatgcgtcagctccgtgaccgcgcccagcgtgagctggaccggctcgac
gagatctggaccaccttcaccaagctggctcccaagcagctcatcgtcgacgaggtgctc
taccgcgagctcatcgatcgctacggcgagtacttcaccggcgccatgggcgcggaggcg
atcaagaagctcatcgagaccttcgacatcgacgccgaggccgaggagctgcgcgaggtc
atccgtagtggcaagggccagaagaagcttcgcgcgctgaagcgtctcaaggtcgtcgcg
gcgttccagtccaacagcaactcgccgctgggcatggtgctcgacgcggttccggtgatc
ccgccggagctgcgccccatggtgcagctcgacggtggccgcttcgcgacgtcggacctc
aacgacctgtaccgccgcgtcatcaaccgcaacaaccggttgaagcgactcatcgatctc
ggcgcacccgagatcatcgtcaacaacgagaagcgcatgcttcaggagtcggtggacgcg
ctgttcgacaacggccgccgcggccgtccggtcaccggaccgggcaaccgtccgctcaag
tcgctgtccgatctgctcaagggcaagcagggccggttccgtcagaacctgctcggcaag
cgcgtcgactactcgggccgttcggtcatcgtggtgggcccgcagctgaagctgcaccag
tgtggtctgccgaagctgatggcactcgagctgttcaagccgttcgtgatgaagcgtctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcgcatggtcgagcgtcagcgt
ccccaggtgtgggatgtcctcgaagaggtcatcggtgagcacccggtgctgctgaaccgc
gcaccgacgctgcaccgtctcggcatccaggctttcgagccgcagctggtggagggcaag
gcaattcagctgcacccgctggtgtgtgaggcgttcaacgcagacttcgacggtgaccag
atggccgtgcaccttccgctgtccgcggaggcgcaagccgaggcgcgcatcctgatgctg
tcgtcgaacaacatcctgtcgccggcgtcgggccgccccctggccatgccgcgactggac
atggtgacgggtctgtacttcctgaccaccatgatcgagggcgacaccggcgagcatcag
tcgtcggccaaggacaaggccgagttcggtgtgtacagctcaccggccgaggccatcatg
gcgatggaccgcggctcactgtcggtccgggccaacatccgcgtgcggctgacccagctg
cgtccgccggccgatatcgaagccgaactcttcgaggacggctggaagccgggcgacgcc
tggacggccgacaccacgctgggccgggtgctgttcaacgaattgctcccgactgcgtat
ccgttcgtcaacgagcagatgcacaagaaggtgcaggcgcggatcgtcaacgatctggcc
gagcgctacccgatgatcgtcgtcgcgcagacggtggacaagctcaaggacgccggcttc
tactgggccacccgttcgggtgtcaccgtgtcaatggccgacgtgctggtgccgccgcag
aagcaggagatcctggagcgtcacgagctcgaggccgaccggatcgagaagcagtaccag
cgcggcgcgctcaaccacgacgagcgcaacgaagcgttggtgaagatctggcaggacgcc
accgaagaggtcggtaaggctctggaggcctactaccccgaggacaacccgatcatcacg
atcgtgaagtccggcgccacgggcaacctgacccagacccgcacgcttgcgggcatgaag
ggtctggtgaccaacccgaagggtgagttcatcccgcggccgatcaagtcctcgttccgt
gagggcctgacggtgctggagtacttcatcaacacccacggcgcccgaaagggtctggcg
gacaccgctcttcgtaccgccgactcgggttacctgacccgtcgtctggtcgacgtgtcg
caggacgtcatcgttcgcgagacggactgcgagaccgagcgtggcgtcaacatcacgctg
gccgagatgcaggacaagacgctggtccgcgatcagcacatcgagacgtccgcctacgcg
cggacgctggccaccgacgccgtcgacgccaagggcaacgtgatcgtcgagcgcggtcac
gacctgggcgacccggcgatcgaggctctgctggccgcgggtgtcaccgaggtgaaggtc
cgctccgtgctgacctgtgcgacgggcaccggcgtgtgtgcgatgtgctacggccgctcg
atggcgacgggcaagctggtcgacatcggcgaggcggtcggcatcgtggccgctcagtcc
atcggtgagcccggaacgcagctgaccatgcgtacgttccaccagggcggcgtctccggc
ggcagcgacatcgtcggtggtctgcctcgtgtgcaggagctgttcgaggcccgcatcccg
cgtgacaaggcgcctattgccgacgtcaccgggcgcgtgcaactcgaagagggcgagcgc
ttctacaagatcaccatcatcccggatgacggtggcgaggaagtggtgtacgacaagctg
tctcgtcgtcagcgcctgaaggtcttcaagcacgacgacggcaccgagcggttgctgtcc
gacggcgaccacgtcgaggtgggccagcagctgatggaaggctccgctgacccgcacgag
gtgcttcgtgtccagggcccccgcgaggtgcagatccacctcgtcaaggaggtccaggag
gtctaccgcgctcagggcgtgtcgatccacgacaagcacatcgaggtcatcgtccggcag
atgctgcgtcgcgtcacgatcatcgattcgggtgcgacggagttcctgcccggctcgctg
accgagcgtggcgagttcgagaccgagaaccgtcgggtcgtcgccgagggcggcgagccc
gcggcgggtcgtccggtgctgatgggtatcacgaaggcatcgctggccacggattcgtgg
ctgtcggcggcgtcgttccaggagaccacgcgcgtgctcaccgatgcggcgatcaactgc
cgcagcgacaagctgcagggtctgaaggaaaacgtgatcatcggcaagctgatcccggcc
ggtaccggcatcaaccggtaccgcaacatccaggtgcagccgaccgaggaagctcgggcc
gcggcgtacacgatcccgtcctacgaggatcagtactacagcccggacttcggtcaggcg
accggtgccgcagtgccgttggacgactacgggtacagcgactaccgctaa
DBGET
integrated database retrieval system
