KEGG   Mycoplasmopsis gallinacea: VO56_02425
Entry
VO56_02425        CDS       T03898                                 
Name
(GenBank) hydrolase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
mgb  Mycoplasmopsis gallinacea
Pathway
mgb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mgb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    VO56_02425
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mgb03019]
    VO56_02425
Messenger RNA biogenesis [BR:mgb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     VO56_02425
SSDB
Motif
Pfam: RNase_J_C RNase_J_b_CASP RMMBL DHFR_1
Other DBs
NCBI-ProteinID: AKA50085
UniProt: A0A0D5ZKB3
LinkDB
Position
670091..671743
AA seq 550 aa
MNHVNIFALGGQDENGKNSYVFEYNDEIFVINAGVKIPINSQNGVDTLIPDFGYLESKRK
KIKGIFISDVKNETFSALPWLVLKIPNLTIYTSAFNKWMIIDRLNKYKINPKDYKIVILN
ARTKIGSLEVMPIPLTGSMPGNNAFDFITPNGDYLFMFNYVEGNLGIYGRTSFSFLKKLL
NNRKIVALISDAGKSNFSGKAIDKLQLPSEVLDIFEKTNKESRIIVGAYDEEMVVLQQIL
DLAKKYNRPVAPYGKTYGQLLDLLKKANPELEMPEFIDYKKVSKHKNAVILVTGSIERLY
LRFMRITDEKDVYLKILPTDTVLMLAPPVNGLESTAAVVLDNIAKNFPILYDIPDNEYYR
NRPTKEDISNLVNMLEPEHFIPTQGLYRYLADAIMYVENNLKKNQKINSISLSNGRIAHF
VDGKLFSTNGKVKPVGDLIIDGFGVGDISSEVISEREALGREGVVIINSIYSPKTKKIIS
NLHINYIGVIDESDKDKIDTLVKETIIKVFQENDFTSLKEVTEKLRKSIRKRIFKLTDKD
PMVAVTFTTI
NT seq 1653 nt   +upstreamnt  +downstreamnt
atgaatcatgtaaatatttttgccctaggtgggcaagatgaaaatggtaaaaattcatac
gtatttgaatacaatgatgaaatctttgtaatcaatgcgggtgtgaaaattccgattaat
tctcaaaatggtgttgatacattaattccagattttggttacttagaatcaaaaagaaag
aaaatcaagggaatttttatctctgatgttaaaaacgaaacttttagcgcacttccttga
cttgtgcttaaaattcctaatttaactatctatacatcagcatttaataaatgaatgatt
attgatcgtttaaataaatacaaaatcaatccaaaggattacaaaattgttattttaaat
gctagaactaaaattggttctttagaagttatgccaattccgcttaccggaagcatgcca
ggaaataatgcttttgatttcataacaccaaacggagattacctttttatgtttaactat
gttgaagggaatcttgggatttatggaagaacaagtttttctttccttaaaaagctttta
aataatcgtaaaatagttgctttaatttctgatgctggtaaaagtaatttttcaggaaaa
gcaattgataaactgcagcttccttctgaagttttagacattttcgaaaaaacaaataaa
gaaagcagaattattgttggtgcttatgatgaagaaatggttgttttgcagcaaatttta
gatcttgctaaaaaatacaatcgtcctgtagccccttatggaaaaacttatggtcaattg
cttgatttgcttaaaaaagcaaatccagaacttgaaatgcctgaatttattgattataag
aaagtttcaaaacacaaaaatgctgttattttagttactggctcaattgagcgtttatat
ttacgtttcatgagaattacagatgaaaaagatgtttatttaaaaatcttaccaacagat
acagtattaatgcttgctccaccagtaaatggtcttgagtcaacagcagctgttgtgctt
gataatattgcaaagaattttccaattttatacgatattcccgataatgaatattacaga
aatagacctacaaaagaagatatttctaacttagttaatatgcttgagcctgaacacttt
attccaactcaaggtctttatagatatttagcagatgcaataatgtatgttgaaaataat
cttaaaaagaatcaaaaaattaactctatttctttatcaaatggaagaatcgctcacttt
gtggatggcaaattatttagcacaaatggtaaagtaaaaccagttggggatttaattatt
gacggatttggagtaggggatatttcaagtgaagttatctccgaaagagaagctttaggt
agagaaggggtggtgattattaactctatttattctcctaaaacaaagaaaatcattagt
aatttgcacattaattacatcggtgtaattgatgaatctgataaagataaaattgacact
ttagttaaagaaacaatcattaaagtattccaagaaaatgacttcacttcgttaaaagaa
gtaactgaaaaacttagaaaaagcataagaaagagaatttttaaattaactgataaagac
ccaatggttgcagttacatttacaactatttaa

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