Mycoplasmoides genitalium G37: MG_340
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Entry
MG_340 CDS
T00002
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mge
Mycoplasmoides genitalium G37
Pathway
mge03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mge00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MG_340 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mge03021
]
MG_340 (rpoC)
03400 DNA repair and recombination proteins [BR:
mge03400
]
MG_340 (rpoC)
Enzymes [BR:
mge01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MG_340 (rpoC)
Transcription machinery [BR:
mge03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MG_340 (rpoC)
DNA repair and recombination proteins [BR:
mge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MG_340 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
MCM_C
Motif
Other DBs
NCBI-ProteinID:
AAC71565
UniProt:
P47582
LinkDB
All DBs
Position
complement(430580..434458)
Genome browser
AA seq
1292 aa
AA seq
DB search
MTTTRRNKRNNKLYKNIKAIKLSIASNDTILNWSEGEVTKAETINYKSLKPEPGGLFDEA
IFGPVKDYECACGKFKKIKYRGVRCDRCGVWVTESIVRRERMGHIALVSPVAHIWMSKEL
PSPSKISLVLNISYKEVEQVLYFVNYIVLDTGKIKDDKIMPFKFKEVLDLTGKGSLSTRQ
KMRRVIGYIFRNLIKSKSSEDYRKGKIFYESLKNSSLPFSLNDAFNYIKKYTGFRVGIGA
EAILELLNKIDLNLEFSRLNDALRKAKKDSVEDAKVKKILRQLETISWFRNSKLHPKNMI
LHTVPVIPPDIRPIIQLDGAKFTTSDINNFYRRVIIRNDRLRRILEDGTVPSIVVNNEKR
LLQESVDALFDNSSRHKPSLSKDKRSLKSLTDRLKGKQGLFRHNLLGKRVDYSGRSVIVV
GPELKMYEVGIPALMILKLFKPFIIHGLINKFDENGNEIRPIAASIRQAEDMIKNQDDLI
WGIVYDVIKDRPVLLNRAPTLHRLGIQAFEPRIVDGKAIRLHPLVTTAFNADFDGDQMAV
HVPLSENAVNEARAVLLASKHILGLKDGRPIVTPTQDMVLGNYYLTTERKGQLGEGIIFS
TVYEARAAYESQKVHLHAIVGISTKAFPNKKFACQGTLITTVGKIIFNDVLGNNVPYIND
GEFDENACPEKFIVKQGEDVRQSILKHQIIPAFSKKVISKLIDLLYLLLEFKDLPKTLDN
IKALGFKYSTFSSTTVSVFDIPKYTNKQNYFDSADQQVLKYKQFYNKGLLTDDERYKRVV
KLWNNVKEKVSDEIQNLIKQEQYRDNSIVVMADSGARCNISNFTQLFGMRGLMSKSFNYE
RNNQSKIIKDTIEVPIKHSFFEGLTINEYFNSSYGARKGMTDTAMKTAKSGYMTRKLVDA
THELIINHDDCGTRKGIVVEAIVETKTKSLIESLFDRIVNRYSITPIVDPETQKTIVEAN
SLITTQLAKQICATSIKEVLVRSVIYCERENGICQYCFGIDLSTGKLVELGTAVGVIAAQ
SIGEPGTQLTMRTFHTGGVSTENNLAQGFERLKQIFEVVTPKDFEKAVISEVKGTVKSIT
TVQNAQEVVIKSNVDERIYTIPFSAQIRVHVGDQVSPGSKITEGSVDIKQLLRIAGIQRV
RQYMIVEIQKVYRIQGIDIADKYVEIIIRQLTNLLQVTDAGNSNLFVGQLVHSHYLNELN
KSLLLAGKMPVIAINQVFGIDEAASKSNSFLSAASFQDTKKILTDAAVKNQVDYLLGLKE
NVIIGGKIPAGTGFLTDEELTFLGSKTVAEEY
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaacaagacgtaataaaagaaataacaagctttataaaaacattaaagcaatt
aaactttccatcgcttccaatgacaccattttgaactgatctgaaggggaagttacaaaa
gctgaaaccattaactataaatcattaaaaccagaacctggaggcttgtttgatgaagca
atctttggacctgttaaggactatgaatgtgcttgtggcaagttcaaaaagattaaatac
cgtggtgtgaggtgtgatcgctgtggggtgtgagttactgaatctattgtacgtagagaa
aggatgggacatattgcacttgtgagtcctgtagctcacatttggatgtcaaaagaatta
ccatctccttccaaaatatcattagttttaaacatctcttacaaagaggttgaacaggtt
ttgtactttgttaactacatagtacttgatacaggtaagatcaaagatgataaaatcatg
ccttttaagttcaaagaagttttggacttaactggtaagggttcactttcaacacgacaa
aaaatgcgtcgtgtgataggttatatcttcagaaatctcattaaaagtaagagtagtgaa
gattaccgtaagggaaaaatcttttatgaaagtttaaaaaacagctctctccccttttct
ctaaatgatgcttttaattacattaagaagtacactggttttagggttggaataggggct
gaagcaattttggaattgcttaataaaatcgatcttaacttggaatttagcaggttaaat
gatgctttaagaaaagccaagaaagatagtgttgaagatgctaaagttaagaagatctta
agacaactggaaactattagttggtttagaaattctaagcttcatcctaaaaacatgatc
ttacatactgttccagttatcccccctgatatcagacctattatccaacttgatggtgct
aagtttaccaccagtgacatcaacaatttttaccgcagggtaatcattagaaatgaccga
ttaagaaggattttggaagatggtactgtaccttctattgttgttaacaatgaaaaaaga
cttttacaagagtctgttgatgctttatttgataactcttcacgtcataaaccatcactt
tccaaagacaaacggtcattgaaatctttaacagatcgtttaaaaggaaaacaaggttta
tttagacacaacttacttggtaaaagagttgattattcaggtagaagtgtaattgtggtt
ggccctgaattgaagatgtatgaagttgggatcccagcactaatgatcttaaagctgttt
aaaccctttattatccatggattgatcaataagtttgatgaaaatggtaatgagattaga
ccaattgccgcttccatcagacaagctgaagatatgattaaaaaccaggatgatcttatc
tggggaatagtttatgatgttatcaaagatcgtcccgttttactaaatcgtgctccaacc
ctacataggttagggatccaagcatttgaaccaagaattgttgatggtaaagcaattaga
ttacacccattagtaactactgcatttaatgctgattttgatggtgatcagatggcagtt
catgttcctttaagtgagaatgcagttaatgaagcaagagctgttctgcttgcatcaaaa
catatcttaggtttgaaagatggaagacctattgtaactcctactcaggacatggtttta
ggtaactattatctaaccacagagagaaaaggacagttgggagaggggattatcttcagc
acagtttatgaagcacgtgctgcttatgaaagtcaaaaggttcatttacatgctattgta
gggataagtactaaagcatttcccaacaagaagtttgcatgccaaggaactttaataaca
acagttggtaagattatctttaatgatgttttaggcaataatgttccttatattaatgac
ggggaatttgatgaaaatgcatgtcccgaaaagttcattgtgaaacagggagaagatgta
agacaatcaattttaaagcatcaaattatccctgcattttccaaaaaggttatttccaag
ttaatcgatctactctatcttttattggaatttaaagaccttcctaaaacacttgataat
atcaaagcacttggctttaagtactctactttttcttcaactactgtttcagtatttgat
atccctaagtacaccaataaacaaaattactttgatagtgctgatcaacaggtgctgaaa
tacaaacagttttataacaagggtttgttaaccgatgatgaacgttataaacgcgttgtg
aagttatgaaacaatgtgaaagaaaaagtatctgatgagatccaaaacttaattaaacaa
gaacagtaccgtgataattccattgtggtaatggctgattcaggtgctagatgtaacatt
tctaactttacccagttatttgggatgcgaggcttaatgtctaaaagctttaactatgaa
agaaataaccaatctaagatcattaaagatacgatagaagttcctattaaacactccttt
tttgaaggtttgaccattaatgaatacttcaactcttcttatggagcgagaaaagggatg
acagatactgcaatgaaaacagcaaagtctggttatatgacaagaaagctagtagatgct
actcatgaattaattattaaccatgatgattgtggaacaagaaaaggaattgttgttgaa
gcaattgttgaaaccaaaaccaaatccttgattgaatcattatttgacaggattgttaat
cgctactcaattactcctatagttgatcctgaaacacaaaaaactattgtagaagctaac
agtcttattacaacgcaattagctaaacagatttgtgcaacatctattaaagaagtttta
gttagatctgttatctattgtgaaagggaaaatggtatctgtcaatactgctttggcatt
gacttgtcaactggtaagttggtggaattgggaactgctgttggggtgattgctgctcaa
tcaattggtgaacctgggacccaattgacaatgcgtactttccatactgggggagtttca
actgaaaacaacttagcacaaggctttgaacgtttaaaacagatctttgaagtagttact
cctaaagattttgaaaaagcagttatctctgaagtgaaaggaacagttaaatcaattact
actgttcaaaacgctcaggaagtagtgattaaatcaaacgttgatgagaggatttatact
atccctttcagtgctcaaatacgtgttcatgttggtgatcaagtttcaccaggttctaag
attacagaaggttctgttgatattaaacaacttttgcgaattgcaggtatccaaagggta
agacaatacatgattgtagagatccaaaaagtgtataggattcaagggatagatattgct
gataagtatgtagaaattattatcagacaactaactaatttgttgcaagtaacagatgca
ggtaacagcaatttatttgttggtcagttagtgcatagccattatctcaatgaactaaat
aagagcttacttttagctggaaagatgcctgttattgcaattaatcaggtgtttggaatt
gatgaagcggcaagtaaatctaactcctttttaagtgctgcatccttccaagataccaaa
aaaatcctaactgatgctgctgttaagaaccaagtagactatcttttaggtttaaaagag
aatgttattattggtggaaaaattccagcaggaacaggatttttaactgatgaagagtta
actttcttaggtagcaaaacagttgctgaagagtattaa
DBGET
integrated database retrieval system
