Mucilaginibacter geliditolerans: HDF18_04615
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Entry
HDF18_04615 CDS
T11620
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mgei Mucilaginibacter geliditolerans
Pathway
mgei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HDF18_04615 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgei03019
]
HDF18_04615 (pnp)
03016 Transfer RNA biogenesis [BR:
mgei03016
]
HDF18_04615 (pnp)
Enzymes [BR:
mgei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HDF18_04615 (pnp)
Messenger RNA biogenesis [BR:
mgei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HDF18_04615 (pnp)
Transfer RNA biogenesis [BR:
mgei03016
]
Prokaryotic type
tRNA degradation factors
HDF18_04615 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
KH_KhpA-B
DUF659
Motif
Other DBs
NCBI-ProteinID:
XPY80412
LinkDB
All DBs
Position
1204302..1206422
Genome browser
AA seq
706 aa
AA seq
DB search
MNVIKKVIDLGDGRTIEIETGKLAKQADGSVVIKMGDTMLLATVVSSPDAKEGVDFLPLS
VDYQEKYAATGRIPGGFLRREARLSDYEVLISRLVDRALRPMFPEDYHADTQVMITLISA
DKDIMPDCLAGLAASAALSVSDIPFNGPISEVRVAKVDGKLVINPTLTQLQTATLEFIVA
GSEFDINMVEGESAEIQEAELVEAIKFAHEAIKVQCFIQKELTIAVGKTEKRVYSHEHSN
DELEKAIYAATYDKVYAIAAEASGKDERGAKFKAVRDEYIATLGEIDDITKFLAKKYYHD
VEYDAIRNLVLDEGKRLDGRTTTQIRPIWSEVGYLPSAHGSAVFTRGETQSLTTVTLGAK
DDEQMIDGAFINGYQKFLLHYNFPGFSTGEVRPNRGAGRREIGHGNLAMRSLKRVLPAED
ANPYTIRIVSDILESNGSSSMATVCAGTLALMDAGVKITNPVSGIAMGLITNEMGTKYAI
LSDILGDEDHLGDMDFKVTGTKNGIVAVQMDLKINGLSYEVLTNALNQAKEGRLHILGEM
AKTITEPREDYKPHAPRIITIRIDKEYIGAVIGPGGKIIQEMQRETGATISIEEVGNQGV
VQIFADNKEAIDKAVTRIKNIASKPEVGEIYEGKVKSIMPFGAFVEIMPGKDGLLHISEI
DHRRIETMDGIFQIGDEVRVKLLDIDKQGKFKLSRKALLPKPEPAK
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaattaaaaaagtaatcgatttaggtgacggccgcaccatcgagatcgaaaca
ggtaaactggccaaacaagccgatggatcagtagtaataaaaatgggtgataccatgtta
ttagctaccgtagtttcatcgcctgacgcaaaggaaggagttgattttttacctctttct
gttgattatcaagaaaaatacgctgccactggtcgtattccaggtggctttttacgccgt
gaggcacgtttatcagactatgaggtattgatctcccgtttggttgaccgtgcattacgc
ccaatgttccctgaagattatcatgctgatacacaagtaatgataaccttaatatcagct
gataaggatattatgcctgattgtttagctggcttagctgcatcagcagcattatcagtt
tctgatatccctttcaatggccctatatccgaagttcgtgtagctaaagttgacggtaaa
ttagttatcaacccaactttaactcaattgcaaactgcaactttagaatttattgttgcc
ggtagcgagtttgacatcaacatggttgaaggtgaaagtgctgagatacaggaagctgaa
ttagttgaagcaattaaatttgcacacgaagctattaaggtacaatgctttatacaaaaa
gagctgactattgcagttggaaaaactgaaaaacgcgtttacagccacgagcacagcaat
gatgagttggagaaagctatctacgctgctacttatgataaagtttacgctattgctgct
gaagcatctggtaaagacgagcgtggtgctaaatttaaagcagtacgtgacgaatacatc
gctaccttaggcgaaattgatgatatcactaaattcttagctaaaaaatactatcacgat
gtggagtatgatgctattcgtaacctggtattagacgaaggcaaacgtttagacggtcgt
accactacccagatccgcccaatatggagtgaagttggttatttaccatctgcacacggt
tctgctgtattcacccgtggcgaaacacagtcattaacaacagttaccttaggtgctaag
gatgatgagcaaatgattgatggcgcgttcattaacggttatcaaaaattcttattacac
tataacttccctggtttctcaaccggtgaggttcgcccaaacaggggagctggtcgtcgt
gagattggtcacggtaacttagctatgcgttcattaaaacgtgtattacctgccgaagac
gcaaatccatacactatccgtatagtatctgatatccttgaatcaaacggttcgtcatca
atggctacggtttgtgccggtacattggcgttgatggatgcaggtgttaaaatcaccaac
ccggtatcaggtatcgcgatgggattgatcaccaatgaaatgggtactaaatatgctatc
ctttctgatattttgggtgatgaagatcacttaggtgatatggactttaaagtaaccggt
actaaaaatggtattgttgctgttcaaatggacctgaaaataaatggtttatcatacgaa
gttttaacaaatgctttaaaccaggctaaagaaggccgtttacatatccttggtgaaatg
gctaaaaccattactgagcctcgtgaggattacaaaccacatgcaccacgcattatcact
atccgtatagataaggaatacattggcgcggtaattggcccgggaggaaagatcatccag
gaaatgcaacgcgaaaccggtgctaccatctcaattgaagaagttggcaaccagggtgta
gttcaaatctttgctgataacaaggaagcaattgataaagcggtaacccgtatcaaaaac
atcgcttcaaaacctgaggttggcgagatatacgaaggcaaagtaaaatcaattatgcct
ttcggcgcatttgttgaaattatgccgggtaaagatggtttattacacatttctgaaatt
gatcaccgcaggatagaaactatggatggtatattccagattggcgatgaagttcgcgtt
aaattgcttgatattgataagcaaggtaaattcaaactttcaagaaaagcgttattgcca
aagcctgaaccggctaagtaa
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