Rasiella rasia: G5B37_08845
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Entry
G5B37_08845 CDS
T06461
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
mgel
Rasiella rasia
Pathway
mgel02020
Two-component system
mgel02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mgel00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
G5B37_08845 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
G5B37_08845 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgel03021
]
G5B37_08845 (rpoN)
Transcription machinery [BR:
mgel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G5B37_08845 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
DUF7366
HTH_12
MarR
NES_C_h
Motif
Other DBs
NCBI-ProteinID:
QIE59668
UniProt:
A0A6G6GM96
LinkDB
All DBs
Position
1967877..1969331
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AA seq
484 aa
AA seq
DB search
MLKQQLNFKLSQKLSPQQIQLMKLIQLPTQAFEQRISQEMNENPALEGGKDESTDFDDEF
SNEDDYSEDNEIIETEINVDDYLSDDEIPSYKLSANNYSADDEDRQTPYASGTSFNQHLL
QQLNTHRFSDEEEQIAKFLVGSVDESGYIRREIADILDDLAFTQNVYTTEEKIKKVLEIV
QELDPAGVGARDLQECLLLQLYRKNPTEPVSLAIEIIDDAFDHFIKKHYNKLIQKFTITE
DDLRAAIGEIESLNPKPGGAYSGNSRMVEHVVPDFAIKIVDGELDLTLNGRNAPELHVSR
EYTNMLKGYKDATKKSKSQKDAVLFIKQKLDAAKWFIDAIKQRQQTLYVTMNAIMHRQKE
YFLTGDERKLKPMILKDIADAINMDVSTVSRVANSKYVDTPYGTKLIKDFFSESMKNDQG
EDVSTREIKKILELTIAEESKKKPLTDDRLAKILKEKGYPIARRTVAKYREQLDIPVARL
RKEI
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacaacagctaaattttaaactttcacagaaactttcacctcaacaaatacag
ttgatgaagttaatacaattgcctacacaggcttttgaacagcgtatttcgcaagaaatg
aacgaaaatcctgcgttggagggcggtaaagatgaaagtacagattttgacgatgaattt
agcaatgaagatgactacagcgaagacaatgaaattatagaaactgagattaatgtagat
gattacttgagtgatgacgagataccaagttataagctttcagcaaacaattatagtgcc
gatgatgaagatagacaaacaccttatgcttctggcacatcctttaatcagcatctgcta
caacaactaaacacccataggtttagtgatgaagaggagcaaatagctaaattcttggtg
ggtagtgtagatgaaagtggttatatacgacgtgagattgcagacatattagacgattta
gctttcacccaaaatgtatatactaccgaagaaaaaattaagaaggttctagagattgtc
caggagttagatccagctggtgtaggtgcaagagacttacaggaatgtttgttgttacaa
ctatatcgaaaaaacccaacagaaccggtaagtttagccatagaaattatagatgatgct
tttgaccactttataaaaaagcattataataaattaatacagaaatttacgatcaccgaa
gacgacctgagagctgccataggtgaaattgaaagtctaaatccgaaaccaggtggtgcc
tattctggtaattcgcgcatggtagaacacgtagtaccagactttgctattaagattgta
gatggtgagcttgaccttacattaaatggtagaaatgctccagaattacatgtgtctcga
gagtatacaaatatgctgaagggctacaaagacgcaactaaaaaatcgaagtcacaaaaa
gatgcggtgctatttattaaacaaaaattagatgccgcaaaatggtttatagatgccatt
aaacagcgtcagcaaaccctgtatgtgactatgaatgccataatgcaccgtcaaaaagag
tattttttaacaggcgatgagcgaaagttgaagcctatgattttaaaagatattgcagac
gctattaatatggatgtctctacggtttctagggtagctaatagcaagtatgtagacacc
ccatacggcaccaagttgattaaagattttttcagtgaatcgatgaaaaatgatcaggga
gaagacgtatctacccgtgaaataaagaaaatacttgagcttactatcgccgaagaaagt
aaaaagaaacctcttacagacgatcgattggcaaagattttaaaagaaaaagggtatcct
attgcccgaagaacagtggctaaatatcgcgaacagctagacatacccgtggcgcgttta
agaaaagaaatttaa
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