Megalopta genalis: 117218335
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Entry
117218335 CDS
T07400
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
mgen
Megalopta genalis
Pathway
mgen03030
DNA replication
mgen03410
Base excision repair
mgen03420
Nucleotide excision repair
mgen03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mgen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117218335
03410 Base excision repair
117218335
03420 Nucleotide excision repair
117218335
03430 Mismatch repair
117218335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgen03032
]
117218335
03400 DNA repair and recombination proteins [BR:
mgen03400
]
117218335
DNA replication proteins [BR:
mgen03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
117218335
DNA repair and recombination proteins [BR:
mgen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
117218335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
BRCT_2
AAA_14
AAA_30
RuvB_N
AAA_22
AAA_5
RNA_helicase
AAA_33
NTPase_1
AAA_assoc_2
PTCB-BRCT
AAA_16
AAA_19
AAA_6
AAA_18
AAA_17
AAA_7
RCF1-5-like_lid
Motif
Other DBs
NCBI-GeneID:
117218335
NCBI-ProteinID:
XP_033322523
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MPRDIRSYFQSTKINPSVTSTKPTKRRIISSDEDDEKIKSPIKRSKKIKILGKNSISVDS
DEEGKQKKTVSPGDIFGKKPINRKEAAKISKKLRKEEAESHDDTKFEATLSQLDISDIEQ
KYLEESQKSNKDSIHNVCEKDDLPKSNSENEEEKTIPFENEDKIEENSTIQKSNTDLRNK
NHIDKAKKHSNVGINDSKLDDKSKHAKNTSKAKSSVYELEIEQSKKKSPKNLDEYEKRAE
KRKQSSALYQQYLQRGGARNPGSKEIPEGSEYCLAGLSFLITGVLDCLEREEAEELIKKY
GGRVLHQVSKKTDYVIVGDDPGPSKISKAKSLNVKQISEDDLLEMIRTKKSGQIQDVKQS
RTKSKDRTKQKHIDSDSTSSSLPKQPKTALNQETEKSAKLQPPNKNGSGDGVIEKMQNKE
YADEKAEKISPKKIHDDRDIMERVIMKDDKKEVKDIKDLQMRTDSLQNINVDVPVQSLVE
KYRPKSMKQVLGQQGDKSNAKKLYMWLNNWHKNQNGQVKRTKPNPWAKNDDGAFFKAALL
SGPPGIGKTTTVQVVCKELGFDLVEFNASDTRSKKLLKESVSELLSNTSLKDYFIDPKNK
PTSKHVLLMDEVDGMAGNEDRGGVQELISLIKSTEVPVVCICNDRNNPKMRTLANYVFDL
RFPKPRLEQIRGAMKSICFKENINISTENLDRLIESTNQDIRQVINHLALFVGKTGTQEK
SEKKHINKDLKLGPWDVVKKVFSAEEHKQMSIHDKSDLFFHDYNIAPLFVQENYLLVTPQ
GPKSKLLEKVAQSSESLALGDIVEKSIRSNGSWSLLPMQACYSSVIPGTIMSGHVAGQIN
FPAWLGRNSKAGKFDRLMQEITVHTRLATGASKEAIILDYIKPLRDAIVRPLAVDCSEGV
NAAIDVMNHYHLLREDLDSLIETSLWPGDRDPMQVIDSKVKAAFTRSYNKSSMAVPYTVS
GVPKKKTAQSKEEEGYLGDENSEEENSDNDNIESDKMIKAKKATSNKKTESKSKGTDTST
TKRNSSDKPSTSKRGRGRGKAK
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgccgagggatatacggtcttatttccaaagtactaagattaatcctagtgttacttca
acaaaacccacaaaaagacgaataatttcatccgatgaggacgatgaaaagataaaatct
cctattaaacgatccaagaaaataaaaatattaggaaagaattcaatttcagttgactcg
gatgaagaaggaaaacagaagaaaacagtttctcctggtgatatttttggtaaaaaacca
ataaacagaaaagaagctgcaaaaatatcgaaaaaattgcggaaagaggaagctgaaagt
catgatgatacaaaattcgaagcaacattgagtcagttagatatatctgatattgaacaa
aaatatttagaagaaagtcaaaaatctaataaagactccattcacaatgtatgtgaaaaa
gatgatttgcctaaaagcaatagtgaaaatgaagaggaaaagacaataccatttgaaaat
gaagataaaattgaagagaatagtacaattcaaaagtcgaatacagacttacgtaataaa
aaccatatagataaagctaagaaacattcaaatgtcggtataaatgattctaaacttgat
gataaatcaaagcatgcaaaaaatacttctaaagcaaaatcaagtgtttatgaactagaa
atagaacaatcaaagaaaaaatcacccaaaaacttagatgagtatgaaaaacgagctgag
aagagaaaacagagcagtgccctatatcaacaatatcttcagaggggaggagctaggaat
ccaggttcaaaagaaattccagaaggttctgaatactgtcttgccggattaagtttcttg
attactggtgttttggattgtctagaaagagaagaagctgaagaacttattaaaaagtat
ggtggacgagttttacatcaagtttctaagaaaactgattatgtcatagttggcgatgac
cctggtccatcaaaaatatcaaaggcaaagagtctgaatgtaaaacaaatatcggaagat
gatctcctagaaatgattcgaacaaaaaaatcaggtcaaattcaagatgtaaaacagtct
cgtacaaaatcaaaagatagaacgaaacaaaaacacatagattcggatagtacgtcttcc
tcgttacctaaacaaccaaaaactgcattaaatcaagaaacagaaaagtcagcaaaatta
caaccgcctaataaaaatggaagtggagacggtgttatagaaaagatgcaaaataaagaa
tatgctgatgaaaaagcagaaaagatttcacctaagaaaatacatgatgatagagacata
atggaaagggtaattatgaaagatgataaaaaagaagtgaaggatattaaagatctacaa
atgagaactgattcgttacaaaatattaatgtagatgtaccagtgcagtctttggttgaa
aaatatagacctaaatctatgaaacaggttttaggtcagcagggagacaaaagcaatgca
aaaaaattatatatgtggttaaataactggcataaaaatcaaaatggtcaagtgaagcgt
actaaacccaatccatgggcgaagaatgatgatggagctttctttaaagctgccctgtta
tctggaccacctggaattggaaagactacaactgttcaagttgtttgtaaggaattaggt
tttgatcttgtagagttcaatgcatccgacaccaggagcaaaaaacttttaaaagagagc
gtatccgaacttctatctaacacttcattaaaggattatttcatagatcctaaaaacaaa
ccaacatcgaaacatgtgttattaatggacgaggtagacggtatggctggtaatgaagat
cgtggtggtgtacaagaattgattagtttgattaaatcaaccgaagtaccagttgtttgt
atttgtaatgatcgaaataatcctaagatgagaacgcttgccaattatgttttcgatctc
cgatttccaaagcctagattagaacaaattaggggagctatgaaatctatatgttttaaa
gaaaacattaatatttctacggaaaatttggatcgcttaatcgaatcaactaatcaagat
atacgacaagtaataaatcatttagctttgtttgttggaaaaactggtacccaagaaaag
tctgagaaaaaacacatcaacaaagatctaaaattagggccttgggacgttgtgaaaaaa
gtattttctgctgaggaacacaaacagatgagcattcatgataaaagtgacctgtttttt
catgattataatatagcaccattgtttgtacaagaaaattatttattggttacaccacaa
ggaccaaaaagtaaattgttagaaaaagtagctcaaagttctgaaagtttagcattagga
gatatagttgaaaaatcaataagaagtaatggatcttggtctcttttgcctatgcaagct
tgttattcttctgttatacctggaactataatgtctggtcatgttgctggtcaaattaat
ttccctgcttggcttgggcgtaactcgaaagctggtaaatttgatagattaatgcaagag
ataaccgtgcatacacggttagctactggtgcaagcaaagaagctataattttggattat
attaaacctctcagagatgctattgttagaccactagcagttgattgtagtgaaggggta
aatgcagcaatagatgttatgaatcattatcacctgctcagggaggatttagattctttg
atagaaacttctttgtggccaggtgatcgtgatcctatgcaagttattgatagtaaggtt
aaggcagcctttacaaggtcgtacaataaaagttctatggctgttccatacacagtcagt
ggtgtgccaaagaagaaaactgcacagagtaaagaggaagagggttacttaggagatgaa
aactccgaagaggagaattctgataacgataatatagaatctgataaaatgatcaaggcg
aaaaaggccacctccaataagaaaacagaatcaaaaagtaaaggtacagacacgagtaca
acgaaaaggaacagtagtgataagccctcaactagtaaacgtggaaggggccgcggaaag
gcaaaataa
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