Megalopta genalis: 117219691
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Entry
117219691 CDS
T07400
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
mgen
Megalopta genalis
Pathway
mgen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mgen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117219691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mgen03041
]
117219691
03009 Ribosome biogenesis [BR:
mgen03009
]
117219691
Enzymes [BR:
mgen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117219691
Spliceosome [BR:
mgen03041
]
Complex A
U2 snRNP components
U2 related factors
117219691
Complex B
117219691
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
117219691
Ribosome biogenesis [BR:
mgen03009
]
Eukaryotic type
90S particles
Helicases
117219691
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_19
AAA_22
nSTAND3
SRP54
Cas3-like_C_2
AAA_25
T2SSE
Flavi_DEAD
ABC_tran
ResIII
AAA_7
TsaE
AAA_30
Motif
Other DBs
NCBI-GeneID:
117219691
NCBI-ProteinID:
XP_033324913
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MSKRRIEVVDPYVKRKADGSTSNSTTIPSAAPKSQVQLNPYTGLPYTPRFHEFYKKRITL
PVFEYRADFMRLLSQHQCIVLVGETGSGKTTQIPQWCVEYSKCMGIKGVACTQPRRVAAM
SVAQRVSEEMDVALGQEVGYSIRFEDCSTPKTVLKYMTDGMLLREGMSDPMLEAYQVILL
DEAHERTLATDLLMGVLKEVIKQRTDLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPV
EIFYTPEPERDYLEAAIRTVTQIHMCEEVAGDLLLFLTGQEEIEEACKRIKREMDNLGTD
VGELKCIPLYSTLPPNLQQRIFEPAPPTKSNGAIGRKVVVSTNIAETSLTIDGVVFVIDP
GFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEKAYKNEMQENTY
PEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALDDDGNLTDLG
AVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCFVRPNESKKAADDAKMRFAH
IDGDHLTLLNVYHAFKQNFEDPQWCYDNFVNYRSLKSGDNVRQQLSRIMDRFSLKRTSTD
FTSKDYYINIRKALVNGFFMQVAHLERTGHYLTIKDNQIVQLHPSSCLDHKPEWVIYNEF
VLTTKNYIRTVTDIKPDWLLKIAPQYYDLQNFPQCEAKRQLEVIQTKLDSKQYQEGF
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacggaggatcgaggttgtggatccgtatgttaaacggaaagcagatggctca
acatccaatagcacaaccataccctcagcagcaccaaaaagtcaggttcaattgaaccct
tacactggtttgccttatacaccaagatttcatgagttttataaaaagcggatcaccttg
ccagtgttcgagtatcgtgctgattttatgaggttattgtctcagcatcagtgtattgta
ctcgttggtgaaacaggatcaggtaaaacaacacaaataccacaatggtgtgtggaatat
tcaaagtgtatgggcatcaaaggagttgcttgtacacaaccaagaagagtggcagctatg
tctgttgcacaaagagtctcagaggaaatggatgttgcattaggtcaggaagtcggatat
agtatccgttttgaagattgcagtactccaaaaactgtattgaagtatatgactgatggt
atgcttcttcgtgaagggatgtcagatccaatgcttgaggcctaccaagtgattctatta
gatgaagctcacgaaaggactttagccacggatttattgatgggtgtgttgaaagaagtg
attaaacagagaacagatttgaagcttgtgattatgagtgcaacattagatgctgggaaa
tttcaacagtattttgataatgcacctttaatgaatgtacctggcagaacgcatcctgtt
gaaattttttatacacctgaacctgaaagagattatttagaagcagctatcaggactgtt
actcagatacacatgtgtgaggaggtagcaggagatttgttactatttttaactggtcaa
gaagagatcgaagaagcatgtaagagaatcaaaagagaaatggataatttaggtacggac
gtaggtgaactaaaatgcataccactatattctacactgcccccgaatctccaacagaga
atattcgaaccagcaccacccacaaaatcaaatggtgctattggtagaaaagtagtagtc
tcaactaatattgcagaaacatcattaactatcgacggtgtcgtctttgtaatagatccc
ggtttcgcgaaacagaaggtatataatcccagaattcgtgtggaatcccttctagtgtca
cctattagcaaagcttctgctcaacaaagagcgggcagagccggtcgtacaagacctggc
aaatgttttcgactatatacggaaaaagcatacaagaacgaaatgcaagaaaatacgtat
cctgaaatattaagatcaaatcttggcagtgttgtattacaactgaaaaagcttggcatc
gatgatttagttcactttgatttcatggatccccctgctccagaaactctcatgagagct
ctggaacttctaaattatttggcagcactagatgacgacggaaatctcacggatttggga
gctgtgatggcagaatttccattggaccctcaactagcgaaaatgctaattgcatcttgc
aatcataactgcagtaatgagattcttagcattactgctatgctttcagtcccacagtgt
tttgtgaggcccaatgaatcaaagaaggctgcggatgacgctaaaatgcgatttgcacac
atcgatggagatcacttaacgctgttaaacgtgtatcacgcttttaaacaaaacttcgaa
gacccacaatggtgttacgacaactttgtcaattaccgatctctgaaaagtggcgacaac
gtcaggcaacagttaagccgaataatggatagattttctttaaaacgtacctcgacggat
tttacatcaaaagattattatattaatatcagaaaagcgttagtgaacggcttcttcatg
caggttgctcacttggagagaactggacattatttaaccatcaaagataatcaaattgta
cagcttcatccaagcagttgtttagaccacaagcctgaatgggtgatctataatgagttc
gtgcttacgactaaaaattacattagaacagttactgatatcaaacccgattggttgcta
aaaatagcgccacaatattacgatttacaaaactttccacaatgcgaagcaaagagacaa
ttggaggtgatccaaacgaaattagactcgaaacagtatcaagaaggattctaa
DBGET
integrated database retrieval system
