Megalopta genalis: 117219704
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Entry
117219704 CDS
T07400
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
mgen
Megalopta genalis
Brite
KEGG Orthology (KO) [BR:
mgen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mgen03009
]
117219704
Enzymes [BR:
mgen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117219704
Ribosome biogenesis [BR:
mgen03009
]
Eukaryotic type
Pre-60S particles
Helicases
117219704
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Motif
Other DBs
NCBI-GeneID:
117219704
NCBI-ProteinID:
XP_033324939
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MISNEMEVDEENETKPLNFHELELDDRILKAVAKLGWLQPTLIQEKAIPLMLDGKDILIR
ARTGSGKTAAFTIPLIQKILMNKRSQKKQEIKGLIIAPSKELCKQIRDVVINLTIKCSRE
VIVVDVSPQVDLSAQKMLLTEKPDIVIGTPSRILQHLKADNMKLKRTLETLVIDEADLIF
SFGYEDEIKSLLNYLPTVYQAALASATLSEDVITLKKLVLHNPATLKLEEPPLAPLSQLS
HYSLAAEENDKSAILYALLKLKLIRGKTIIFVNTVDRCYKLKLFLEQFGIPTCVLNSELP
AVSRCRAVTQFNSGTYDIIIASDEKSLEEPHVVKVKKSKRKKDKESGVARGIDFQFVSNV
INFDFPLDINSYIHRAGRTARGNNHGTALSFVSIRERPRLEQLEEELKHCYNRDSLFKTY
VFKLEEVEGFRYRAKDAWKAVTRIAVREARLKEIKQEVLNCQKLKSYFEDNPRDLQSLRQ
DKALHTVRIQQHLKDVPDYIVPPTLKRLMGVGKRKRFNREAAASRSTATQLKYKARASNP
LISLRIRK
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgatatcaaacgagatggaagtggacgaagaaaatgaaacgaaaccgctgaacttccac
gagttagaactggacgatagaatactgaaggctgtcgcaaaactaggttggttgcagcct
acattgatacaagaaaaagcgataccgttaatgttagatggaaaggatattttgatcaga
gcgcgtacaggatctggaaaaacagctgcatttactataccactcatccagaaaatttta
atgaacaagcgctcgcagaaaaagcaagaaattaaaggtcttatcatagcacctagcaag
gaactgtgtaaacagatacgcgatgtagtgatcaatttaactataaaatgtagtagagaa
gtaatagtagttgatgttagtccacaagtagatctgagtgctcagaaaatgttgctaaca
gagaaacctgatattgttattggtactccaagcagaatattacaacacttaaaagcagat
aacatgaaattgaagcgtactttggagacattagtaattgacgaagctgacttgatattt
tcttttggatacgaggatgaaataaaaagtttattgaattatttgcctactgtgtatcaa
gcagcattagcttctgcaactttgtcagaagatgttatcactttaaaaaaattggttctt
cataatccagctactctaaaactagaggagcctccattagctccattatctcaattatca
cattatagtcttgctgcagaggaaaatgataaatctgctattttatatgctctgttgaag
ctaaagttaattcgggggaaaactattatctttgtgaatacagtggatcgttgttataaa
ttaaaattatttttggaacagtttggtatacctacctgtgtcttaaattctgaattgccc
gcagtttcacgatgtagagctgttactcaatttaattctggaacatacgatatcataatc
gcatcggatgaaaaatcattggaagaacctcatgtagtgaaagttaaaaagagtaaacga
aaaaaggacaaagaatctggcgtagcacgcggcatagattttcagtttgtctctaacgta
attaattttgactttcccttggatataaactcttacattcatagagctggccgaactgca
cgcggaaataatcatggaactgctttgagttttgtgtcgataagagaaaggccacgtctt
gaacaacttgaggaagaattaaaacattgttacaatcgtgattcattattcaaaacatat
gtgttcaagctagaggaagtagaaggtttcagatatcgagcaaaagatgcttggaaagcg
gtaacaagaatagctgtacgtgaggctcgtttaaaagaaataaaacaagaagttctgaac
tgtcagaaattgaaaagctattttgaggataacccaagagatttacagtctttgagacaa
gataaagcattacacactgtaagaatacagcagcatttgaaggatgtacccgattacata
gttccacctactttaaaaagattaatgggcgtcggtaaaagaaaaagatttaacagagaa
gctgctgcatcaagatctaccgccacacagttaaaatacaaagcgcgagcgtcgaatcca
ctaatcagtttacgaatacgaaaataa
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