Megalopta genalis: 117220280
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Entry
117220280 CDS
T07400
Name
(RefSeq) SR-related and CTD-associated factor 4-like isoform X1
KO
K13191
RNA-binding protein 16
Organism
mgen
Megalopta genalis
Brite
KEGG Orthology (KO) [BR:
mgen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgen03021
]
117220280
03041 Spliceosome [BR:
mgen03041
]
117220280
Transcription machinery [BR:
mgen03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117220280
Spliceosome [BR:
mgen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117220280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
117220280
NCBI-ProteinID:
XP_033325991
LinkDB
All DBs
Position
Unknown
AA seq
1485 aa
AA seq
DB search
MEAVKAFNAELSALYDVKPPISKAKMNSLTRGAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGVEKDVFAPRFAKNMQTTFLNLLKCPQEDKSKVIRVLNLWQKN
AVFPSEVIQPLFDLADPNHPIHKEQAVNANGTLNTSSTNNTSNTGTAVKTPPLTVKNAVK
DQKLFSSAKTIDPVWLAQTKMETANIVNANKLLGQTNAGQMDASFLDQLQHLQQLLLKKQ
EAANEQKTSVKFDKKLLDFDYGEEEDDDVVVANSPVATTASNAGQHNVPTGNSLESLGFL
LTNPEVLRQLQTLQQTMQGNASSSQHEMEEKMRKLQQMKQQEEEFDKHLAQTVPNLPFAS
ECELKPSDILKPNQQNTYTTNVSSGVIQDMSQPPPGYPPALPYASQPLSNIRQINQQGHQ
NQKSPLLDERQDTQDYSGNGARRDSSSVEIVNCDSARSQSRSPDRYRHHSRSRSPRHRDR
DRDRDRDRDRDRDRKSRSRSRSRRRRSRSRDRGRDRKRDDSREKMTEEEREKERERRKRG
LPPIVRDKLSVCSTTLWVGHLSKLVHQEELSDTFGEFGDIVSIDLISPRGCAFICMNRRQ
DAYRALTKLKNHKMQGKAITLAWAPGKGVKGKEWKDYWEVELGVSYIPWNKLINVTDQDL
ELLEEGGMIDEDTLPPNLKGKLKHSGTNADILQQQLQLQQQALVAAAAMPSLADGIVNVM
QPTTATQQQQSQQSQQQGQQQQQVIDTSQPPPIRPPTSAALLPPPNTQLQMMPPAFTMPG
VPRMLGPMGLPMAHSLMPNVPIGVPPPNMQSLLGPPGMMQTMLTPQVNSPFGAGVGVGLL
TQIPLPAPAAPSDKPNSTGMPHNVPPIGVPPPTTETGMPNLPMLRQPYGVGPSAPLQMQL
PQQQHSADDMDVEMEDAMPQSSNGAKNKGNLIDQLSQNDDRPDGDQQSDQQHRDYKERDR
ERENRERRDRETHLSHRDRDNNDSRMDRGRERGRGRDRGRDRRRDIRDRDRDERRERENR
ENREGNPQNQSLQENDSTPKKDAKPSLADRLRQLADGTLPLEDRVDRIPPRSRQDRDRSD
RSFDDSRAARGEPLSSLMDLPKFGLPQERSDFPARPPDFRNPQDPREFQQQRDRQNFGRG
PRGSQMHEEFMDAPRIQGGMFQEEFDNRIHGQQRIEEFGRLGPPREQREEFDRSEVRGRR
PLDDRDRFDYEIRRDGFDPRLQDGFDPRGHLDRGDFEPRRREFFGIEPMFGMPPIMGPRG
PRPGHPDGFGPRPAPLGARGPGPLMFHPRGLGPRPLRPGMRPFGPRGPPFDPREPDAFFR
PPFDDIRPHVRPPFGPMGPPSILPPESAAPWRNQEHPPGSWPPDSENHSQRDNPRDKKGV
KHPNNQNMERDSRNNRGRKSRWANVSPSGEETEEPKEQEPSSVPVDVKEESIKEEEAVVK
PEEQKTELMEVIPSEKKEDLEESSIETKQEEGIETTKEEEDRRDS
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggttaaggcatttaatgcggagctttcagctctttacgatgtcaaaccacca
atttctaaggccaagatgaactctttaactaggggcgcaattaaggcaatcaaattctat
aaacatgttgtgcaaagtgttgagaagttcattcaaaaatgtaagccagagtacaaagtg
cctggactgtatgttatagattcaattgtacgccagtctagacatcaatttggagtagag
aaagatgtctttgctccacgttttgctaagaatatgcaaaccacctttttgaatcttctg
aaatgtcctcaggaagacaagagtaaggtgattagagttttaaatctttggcagaaaaat
gcagttttcccttctgaggttatacagcctttattcgatcttgcggacccaaatcatcca
attcataaagagcaagcagttaacgcaaatggtacactgaatacttcttcaacaaataac
acaagtaatacaggtactgctgttaaaacacctcccttaactgtaaagaatgcagtaaaa
gatcagaagctgttttcctctgcaaagacaattgatcctgtttggcttgcgcaaacgaaa
atggaaacagcaaatatagtaaatgctaataagctcttgggccagacaaatgcaggtcaa
atggatgcgtcttttcttgatcaactacaacatttacaacaattattgcttaaaaaacaa
gaggcagcaaatgaacaaaaaacttccgtgaaatttgataagaagctgctagattttgat
tatggcgaagaagaagacgatgacgttgttgttgcgaattctccagtggcaacaacggcg
tcaaatgctggccaacacaacgttcctacaggaaatagtttagaaagtcttggatttctt
ctaacaaatccagaggttttaagacagcttcaaacgttacaacaaacaatgcaaggaaat
gcttcttcatcgcaacatgaaatggaagaaaagatgaggaaactacaacaaatgaagcaa
caggaggaagagtttgataaacacctagcacaaactgttcctaatttaccatttgcgtcg
gaatgcgaattaaaaccgtcggacattttgaaaccaaatcaacaaaacacatacacaaca
aatgtaagtagtggggtcatacaagatatgagtcaaccgccaccaggttatccaccggct
ctaccgtatgcctctcaacctctgtcaaatattaggcaaattaatcaacaaggccatcag
aatcaaaaaagtccgcttctcgatgaacgacaagacacgcaagattattcaggaaatggt
gcaaggcgagatagtagcagtgtagaaattgtaaattgtgatagtgcgagatcacaaagc
agatctcctgatcgatataggcatcacagtcgatctagatcaccacgacatagagataga
gatagagacagggatagagatcgagatcgagacagagatagaaaatcccgatcgagaagc
aggtccagaagaaggaggtctcgctctagagatagaggacgtgatagaaaacgcgatgat
agtcgagaaaaaatgactgaagaagaacgagagaaggaaagagaaaggcgtaaacgaggc
ctgccaccaattgtgagagataaattaagcgtttgtagtacaacgctttgggtagggcat
ttatctaagttggtacatcaagaagaactttcagacacttttggagaatttggtgatatt
gtcagcatagatttaatttcacctagaggttgtgcttttatatgtatgaatagaagacag
gatgcatatagagctcttactaaacttaaaaatcacaaaatgcaggggaaagcaatcact
ttagcctgggcaccaggaaaaggtgtaaaagggaaagaatggaaagattattgggaagtt
gaactgggagttagttatatcccttggaataaattaattaacgttactgatcaggaccta
gaattacttgaggaaggtggaatgattgatgaagataccctgccgcctaatttgaaaggt
aaactaaagcattccggaacaaatgcagacatacttcagcagcaattgcaattacagcaa
caagctttggttgcagctgccgctatgccaagtctagctgatggtattgtgaatgtaatg
caacctacaactgccactcagcagcagcagtctcaacagagtcaacaacaaggtcaacaa
cagcagcaagtgattgatacaagtcaaccaccccccattagacctcctacgtcagctgca
cttctgccaccgccaaatacccaactacaaatgatgccacctgctttcacaatgcccgga
gtcccccgcatgcttggaccaatgggattaccaatggcgcatagcttgatgccgaatgtt
ccaataggtgtaccaccgccaaatatgcaaagtttgttaggaccgccaggaatgatgcaa
actatgcttacaccacaagttaattcaccgtttggagctggcgtaggtgtcggtttattg
actcaaatacctctgccagcacctgctgcaccttctgataagcccaattctactggtatg
ccacataatgttcctccaattggagttccgccaccaacaacggaaacgggaatgccaaat
ctgccaatgttacgtcagccttacggtgtagggccttctgctcctttacaaatgcaacta
cctcaacaacaacattctgcggatgatatggatgtagaaatggaagacgcgatgcctcaa
agttcgaatggggctaagaataagggcaacttaattgaccaattatcacaaaacgacgac
aggccagatggtgatcaacaatcagatcaacagcatcgggattacaaagaaagagacagg
gaacgagaaaacagagagagaagagatagagaaacacatttgtctcatagagatagagac
aacaatgattccagaatggatcgtggaagggaaagaggtagaggaagagatcggggacgc
gaccgtaggagagatatcagagacagagatagggatgagagaagagaaagagagaacaga
gaaaatcgcgaaggcaatccacaaaatcaaagccttcaagaaaatgattccactccgaaa
aaggacgctaagccgagcttagcggatcgcctacgtcaattggctgacggtactcttccc
ctggaagatcgagttgatcgaataccccctcgtagccggcaagatcgagacaggtcggat
agaagctttgatgactcccgagcagcacgtggtgaaccactctcatcgctaatggattta
ccgaaattcggtttacctcaagaaagaagtgactttcctgctcgaccgccagatttccga
aatccccaagatccaagagaatttcaacaacagagagacagacagaattttggaagaggt
cctagaggatcacaaatgcatgaagaatttatggacgctccaaggatacagggtggtatg
ttccaagaagagttcgataatagaatacatgggcagcaaagaatagaagaatttggaaga
cttggacccccccgagaacagagggaggaatttgacaggtctgaagtgagaggaagaagg
ccgcttgatgatcgggatcggtttgattatgaaattaggcgggatggtttcgatccacgg
ctacaggatggcttcgatccaagaggacatctggatcgtggtgattttgaacctagaaga
cgagaattttttggaattgaacccatgtttggaatgccacctattatgggacccagaggt
ccgagacctggtcatcccgatgggtttggtcctcgtccagctcctttaggtgctcgtggc
cccggacctttaatgttccatccaagagggttaggacctcgtcctcttcgccctggtatg
agaccttttggtccacgtggtccaccgtttgatcctcgtgagccggatgcttttttcaga
cctcctttcgatgatattcgcccacatgttcggccaccatttggacctatgggccctcca
tccattcttcctccagagtctgctgctccgtggagaaatcaggaacaccctcccggctca
tggcctcctgattctgaaaatcattcgcaaagagacaatcccagagacaaaaaaggtgtt
aaacatccaaacaaccaaaatatggaacgggacagtcggaacaacaggggacgtaaatct
aggtgggccaatgtgagtccatccggagaggaaacggaagaaccgaaagagcaggaacca
tcttctgttcctgttgatgtgaaagaagaatctatcaaggaagaggaagctgttgtgaaa
cctgaagaacaaaaaactgaattaatggaagtaattcctagtgaaaagaaggaggatttg
gaagaatcatcaattgagacgaaacaagaagaaggcattgaaacgacgaaggaggaagag
gaccgcagggattcttag
DBGET
integrated database retrieval system
