Megalopta genalis: 117220456
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Entry
117220456 CDS
T07400
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
mgen
Megalopta genalis
Pathway
mgen03020
RNA polymerase
mgen03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mgen00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117220456
09124 Replication and repair
03420 Nucleotide excision repair
117220456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgen03021
]
117220456
03400 DNA repair and recombination proteins [BR:
mgen03400
]
117220456
Enzymes [BR:
mgen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117220456
Transcription machinery [BR:
mgen03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
117220456
DNA repair and recombination proteins [BR:
mgen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
117220456
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
DUF3137
Motif
Other DBs
NCBI-GeneID:
117220456
NCBI-ProteinID:
XP_033326312
LinkDB
All DBs
Position
Unknown
AA seq
1904 aa
AA seq
DB search
MATSDSKAPLRTVKRVQFGIISPDEIRRMSVTDGGIRFPETMEGGRPKLGGLMDPRQGVI
DRNSRCQTCAGNMTECPGHFGHIDLAKPVFHVGFITKTIKILRCVCFYCSKLLVSPHNPK
IKEIVMKTKGQPRKRLTFVYDLCKSKNICEGGDEMDINKENQEQPPAERKPGHGGCGRYQ
PNLRRSGLDVTAEWKHVNEDSQEKKIALTAERAWEILKHITDEESFILGMDPKFARPDWM
VVTVLPVPPLSVRPAVIMYGSAKNQDDLTHKLADIIKANNELIRNEQAGAAAHVISENIK
MLQFHVATLVDNDMPGMPRAMQKSGKPLKAIKSRLKGKEGRIRGNLMGKRVDFSARTVIT
PDPNLRIDQVGVPRSIAQNLTFPEIVTPFNIDKMQELVRRGNSQYPGAKYIVRDNGERID
LRFHPKPSDLHLQCGYRVERHIRDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSC
TSPYNADFDGDEMNLHVPQSMETRAEVENIHVTPRQIITPQANKPVMGIVQDTLTAVRKM
TKRDVFIEKEQMMNILMFLPSWDGKMPQPCILKPKPLWTGKQIFSLIIPGNVNMIRTHST
HPDEEDDGPYKWISPGDTKVMVEHGELVMGILCKKTLGTSAGSLLHICMLELGHEVCGRF
YGNIQTVINNWLLLEGHSIGIGDTIADPQTYLEIQKAIKKAKEDVIEVIQKAHNMELEPS
PGNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACV
GQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLI
DTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLCGETVEFQNLPT
IKLSNKSFEKKFKFDPTNERYLRRIFNEDIVREMMGSGEVISELEREWEQLNKDRGVLRE
IFRSGESKVVLPCNLQRMIWNVQKIFHINKRAPTDLSPMRVIQGVKDLLEKCIIVAGDDR
LSKQANENATLLFQCLVRSTLCTKCVSEEFRLSGEAFEWLIGEIETRFQQAQVSPGEMVG
ALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLIGAAA
RDAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQNTVIAEDQEFVNVYYEMPDFDPTKIS
PWLLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDDKF
TGDTEEETVDKMEDDMFLRCIEANMLSDMTLQGIEAIGKVYMHLPQTDSKKRIVITETGE
FKAIAEWLLETDGTSLMKVLSERDVDPVRTFSNDICEIFQVLGIEAVRKSVEKEMNAVLQ
FYGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLLDAASHAE
VDPMRGVSENIIMGQLPRIGTGCFDLLLDAEKCKAGIEIPMAVGAGVMGTAGMFFGSVAT
PSMSPQMTPWMGATPGYGASSMSPALGSGMTPGGACFSPSGASDASGLSPAYSAYSPQPG
SPGSPGPSMSPYPMSPAGGASPSYSPTSPAYLPTSPSMTPSSPNYSPTSPTYSPTSPNYS
PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP
SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTP
ASPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPTSPSFAGTSPQYTPASPT
YSPTSPTYSPTSPSYSPSSPQHTASGSTRYSPSSPNYSPTSPTYSPTSPQYSPSSTKYSP
TSPTYTPTSPSYSPTSPTYSPPVPGYSPTSPTYSPASPAYETDD
NT seq
5715 nt
NT seq
+upstream
nt +downstream
nt
atggccacgtccgactccaaagcgcctttgcgaaccgtaaaaagggtccaatttggcatt
atttctcccgatgaaatacgtcggatgtccgtcacagatggcggcattcgtttcccagaa
actatggagggcggtaggcccaagttgggtggacttatggacccgaggcaaggtgttatt
gataggaactctcggtgtcagacatgtgctggtaacatgacagaatgtcctgggcatttt
ggacacatagatttggccaaaccagtctttcacgttggttttataacgaaaacaataaaa
atattgagatgcgtttgtttctattgctccaaattacttgttagtccacacaatccaaag
atcaaagaaatcgttatgaaaactaaaggtcaaccacgtaaacggcttacatttgtttac
gatctatgtaaaagtaaaaatatctgcgagggtggcgatgaaatggatatcaacaaagaa
aatcaggagcaaccacccgcagagagaaaaccaggacatggaggttgtggtagataccaa
cctaatctcagaagatcaggcttggacgttaccgcagagtggaaacatgtaaatgaagat
tctcaagaaaagaaaattgcgctcacagcagagagagcatgggaaatattaaagcacatt
acagatgaggaatcattcattctgggtatggatccaaaatttgccagaccagattggatg
gtagtaactgttttaccagttccacccctgtctgtaagaccagcagttattatgtatggt
tcagcaaagaatcaggatgatttaacacacaaactagcggatatcataaaggcaaataac
gaattaattagaaatgagcaagccggagcagctgcgcacgttatatccgaaaatataaag
atgttacaatttcatgtagcaacgttagtcgataatgatatgcctggaatgcctagagca
atgcaaaaatcaggaaaaccgcttaaggccattaaatctagactgaaaggtaaagaaggg
agaattagaggtaatttgatgggtaaacgtgttgatttctcagctcgtaccgtcatcaca
ccagatcctaacttacggatcgatcaagtaggtgtgcctcgcagtatcgcccagaactta
acattcccagaaattgtaacgcctttcaacattgataagatgcaagagcttgtcaggcgt
ggaaactcccagtatccgggagcaaaatacatcgtcagagacaatggagaaagaatagat
ttgagatttcatccaaagccatccgatctgcatttgcaatgcggctacagagtagagcgt
cacattcgcgatggcgatttagtaatcttcaatcgtcagccgacgctccacaaaatgagt
atgatggggcacagagtgaaagttctgccttggagtacattccgtatgaatctcagttgt
acgtcaccctataacgccgatttcgatggcgacgagatgaacttgcacgtaccgcaatcg
atggagactcgcgcggaagtagaaaatattcacgtgacgcctcgacaaattatcactccc
caggcgaacaaaccagtcatgggtattgtacaggatacgctcacagctgtaaggaaaatg
accaaaagggatgtgtttattgaaaaggaacaaatgatgaacattcttatgttcttgccc
agttgggacggcaaaatgccgcagccctgtatattgaaaccaaaacctttatggacgggc
aaacagattttctccttgattataccaggcaacgtgaacatgatcagaactcacagcaca
catccagacgaggaagacgatggtccgtacaaatggatatcccctggtgacaccaaagtc
atggtagaacacggagaacttgtcatgggtattctctgtaaaaagactctgggtacatct
gccgggtctctgcttcacatttgtatgctggagctgggccatgaagtttgtggacggttt
tacggaaacattcagacggtaattaacaactggttgttgttggaaggtcactctattggt
attggagacactattgccgatcctcagacctatctcgagattcagaaagcgatcaagaaa
gccaaagaggatgtaatagaggtgattcagaaagctcacaatatggaactggaaccgtct
cctggtaacactttgaggcagacttttgagaatcaagtaaacagaattctaaacgacgct
cgtgacaaaactggtggttctgcgaagaaatctctgactgaatacaacaatctaaaggct
atggtggtatcaggttcgaagggatccaatattaatatctctcaggttattgcttgcgtg
ggtcagcaaaacgttgaaggtaaacgaattccattcggtttccggaagagaacgttgcca
catttcatcaaggacgattatggtcccgagtccagaggattcgtcgagaactcgtaccta
gccggtttgacgccatccgaattttatttccacgctatgggaggtcgcgagggtcttatc
gatacggctgtaaagaccgcagaaactggatacattcagcgtcgtctaataaaggctatg
gaatctgtaatggtgcactacgatggaacagtaaggaattccgtaggacaactcattcag
ttgcgatacggtgaagacggtctatgcggtgaaactgtggaattccaaaacttgcccact
attaaattaagcaataaatcatttgaaaagaagtttaagttcgatccaaccaacgaacgt
tacctacgtcgtatctttaatgaagacatagtcagagagatgatgggatctggagaagta
atttctgaattggagagagaatgggagcagttaaacaaagatcgcggtgtgcttagagag
attttccgtagcggcgaatccaaggtggtattgccttgtaatttacagagaatgatctgg
aatgtacagaagattttccacataaacaaacgagcacccaccgacttaagtcctatgaga
gttatacaaggtgtgaaggatcttctagagaagtgtattattgtagctggtgacgataga
ctcagcaaacaagcgaacgaaaacgctacattgctgttccaatgtttagtgagatctact
ttatgtacaaaatgtgtatctgaagaatttaggctgtctggtgaagcttttgaatggttg
atcggagaaattgaaacgagattccaacaagcacaggtatcacctggcgagatggtaggt
gccttggccgctcagtcgctcggcgaaccagccactcaaatgacattgaacactttccac
tttgctggtgtgtcgtcgaagaacgtaacccttggtgtacccaggctaaaggaaattatc
aatatcagtaagaagccaaaggctccttcgttgactgtgtttttgatcggtgctgccgca
agagacgcggaaaaagcgaagaacgttctctgtcgtctggaacacaccaccctaagaaag
gtcaccgctaacacggcgatctattacgatccagatccgcagaacactgtgattgcggag
gatcaagaatttgtaaatgtctactacgaaatgcctgacttcgatccgactaaaatatcg
ccatggttgcttcgtattgaattggatcggaagagaatgacggataagaaattgaccatg
gaacaaatagcagagaaaattaacgctggctttggcgatgacttgaactgtatattcaac
gacgacaatgctgaaaaattggtcttgcgaattaggataatgaatagcgacgataaattc
acaggagacacggaggaggaaactgtagataaaatggaggacgacatgttcctccgatgt
atcgaagcgaacatgctcagtgatatgactttacagggtattgaggctataggaaaagtg
tacatgcatttaccacaaaccgattcaaagaaacgtatcgttatcacggaaactggagaa
ttcaaagcgatcgcagaatggttattggaaacggacggaacaagtttgatgaaagtacta
agcgaaagggatgtggacccagtcaggacattcagtaacgacatttgtgaaatattccaa
gtgttgggtatagaggctgtacgaaaatcagtggagaaagaaatgaacgctgtattgcaa
ttctatggtctttacgtgaattaccgtcatcttgctttactttgtgacgttatgacggct
aaaggacacttgatggctattacccgtcacggaattaataggcaagatactggcgctctt
atgagatgttctttcgaggaaacggtagacgtcttactagacgcagcatctcacgcagaa
gttgatcccatgagaggagtatcggaaaacattataatgggacaacttccacgtatagga
acaggatgtttcgatttgctgttggacgcggagaaatgcaaggcaggtattgaaataccg
atggctgtaggagctggcgtaatgggaactgctggaatgttctttggcagtgttgctaca
ccgagcatgagcccacaaatgacaccttggatgggtgctactccaggctatggagcatcc
agcatgtcacctgcattgggaagtggtatgacacccggaggtgcatgcttctcgccatcg
ggagcatcagacgcatcaggactttcgccagcctattctgcatactcgccacaacctggt
agtccaggaagtccaggacccagcatgagtccgtatccgatgtcacctgcaggaggtgca
tcgcctagttactctcctacatctcccgcctatttaccaacatcaccgagcatgacaccg
tcgagtcccaattactcgccaacgagtcctacttactcgcccacgagtccaaactactcg
ccaacgagtccaagttactctccgacatcgcctagttattcaccaacgtcgccaagctat
tcaccaacaagtccaagctattcgcctacgtcgccgagctactcgccgacatcaccgagt
tattcaccgacgagtcctagttactcaccgacaagtcccagttattcaccgacgagtcca
agttactcgccaacaagtcctagttactcgccaacgagtcctagttattcaccgacaagt
ccaagttattcaccaacatcaccaagttactcgccaacgagtccaagttattcaccgacg
agtccaagctattcgccgacaagcccaagctattctcctagttcaccgaattacacgccg
gcgtcgccatcttattctcccacaagcccaagctattcaccaagttctccacaatattcg
cctgctagtccaagctattcaccgagcagtcccaaatattcaccgaccagcccaagttac
tcgcccacgtcgccgtcgttcgctggaacctcgcctcaatatacacctgcgagtccaacg
tactcgccaacaagtccaacatattcgccaacgagtccatcgtactcgccgagctccccg
caacacacagcatcaggaagtacacgatactcgccgagcagtccgaactattctccaacc
agtccaacctactcgccgacgagtcctcaatactcgccatcgagtactaagtattcgcct
accagtccgacgtacacaccgaccagcccaagttactcgccgacaagcccaacgtactcg
ccaccagtgccgggctactcgccaacgagtccaacttattcaccggcgtcaccagcttac
gaaacagatgactag
DBGET
integrated database retrieval system
