Megalopta genalis: 117220630
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Entry
117220630 CDS
T07400
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K19719
collagen type II alpha
Organism
mgen
Megalopta genalis
Pathway
mgen04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
mgen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117220630
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mgen00536
]
117220630
Glycosaminoglycan binding proteins [BR:
mgen00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117220630
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
117220630
NCBI-ProteinID:
XP_033326694
LinkDB
All DBs
Position
Unknown
AA seq
1495 aa
AA seq
DB search
MWSPRFSMGRKALQLATAVVVFQVLLLQVDCIRTKLRKQRSKPVQAQQPVNGHYDYAYYD
NYDEYEDTNGTAPISTSLPTTAFNPTSLGREEALPTDTSVPTTTRYFRQGYPDEINATSD
RDNLPSTEIIPGESGLINSVAVPELRGEPGRPGDAGRPGDVGYPGQPGTPGIPGPPGPPG
SVPDVSMYYQQLALSQGSEDKGPTGLASPYIQTQMGPVGPRGPPGPPGLSGPQGFQGVRG
EPGEPGAAGPAGAPGPRGLPGLPGKDGNTGEDGESGPPGSPGPVGPRGLPGLSGLPGIKG
HRGFPGLDGAKGEQGVQGEKGSLGAPGPMGIMGPVGPAGPRGERGREGPPGPPGIRGVDG
IPGPPGQPGAVGKSGPPGYPGSPGMKGDQGAQGPKGSQGLQGPRGETGRPGQPGESGPQG
PQGKDGIPGEKGSTGSPGLVGTPGFPGARGQPGIPGNPGTPGMKGMPGLPGERGFRGDSG
SKGDAGAQGPRGLPGSPGNEGKRGKRGMRGPSGSMGPPGERGNPGVPGPPGIDGPMGPKG
QSGDRGLVGPPGPKGGIGDPGRPGPAGLQGTRGTMGRPGAPGKPGNPGDRGIQGADGKPG
EQGPPGIQGVPGLIGPTGEKGYPGEPGKAGEPGNPGPPGPRGDTGKEGATGSQGSPGPSG
ADGERGPPGAPGARGFQGFPGAGGNPGTPGKDGEPGVQGPPGPAGASGNRGERGFPGERG
QAGVPGLPGPKGERGTQGLDGPLGFPGEKGDRGNPGLPGLIGIPGLRGIPGESGPKGERG
STGPFGPEGPPGRIGERGPQGLVGPTGPPGEPAERGDPGSPGSPGEVGAPGAPGERGPQG
VQGSPGFPGPQGLIGLPGLKGDRGYPGSKGDQGNSGLPGTPGETGPMGLTGLTGAKGVRG
EPGLRGEPGAMGQPGIPGAVGAAGPPGPSGPSGSPGLQGIKGAAGETGRTGSTGPTGFPG
LSGADGTKGESGSEGPAGAPGPQGPQGTPGERGIPGFAGPPGPVGARGLRGPSGETGAPG
KPGSEGPQGPPGLIGPIGPTGPTGEVGPEGPIGKPGIPGLSGRPGDKGPPGIAGPTGLPG
PPGLQGQPGQAGPAGAAGERGPKGEAGPQGVEGQQGLRGKPGPIGLEGPKGDRGEEGLKG
SKGHRGFTGLQGLPGSIGPAGEKGPPGSPGVPGKDGEPGIRGSPGRDGSPGLIGLSGNPG
PKGPPGDEGRHGPPGLPGPPGPPGPPGEVGLGYDAASLAALLSQGQTKGPDPLLGDEPPR
IFSKDISEEERRQLILKAYKHLSSSFKKFVKPDGEKNSPAKTCRDLYVAYPDKPSGEYWI
DPNEGDARDAILVYCDAKRRATCLLPNPVRSPEITYITDQVETWLSDIENGMKITYKTDS
NQVGFLQLLSKSASQNITYHCKNSVAYFDSERKTYRKGMKLLSWNDAELTPRGNQRLKYE
MIMDDCKLRSEEWGKTIISYETDKPIRLPIIDIALRDIGKPEQSFYVEIGAACYE
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcgccacggttctccatggggcggaaggcccttcagctggctactgcggtcgtt
gtcttccaagttcttctgctccaggtcgactgcatcaggactaagctcagaaagcagcgc
tcgaagccggtgcaagctcaacaacctgtcaacgggcattacgactacgcgtactatgat
aactatgacgagtacgaagatacaaacggcactgcaccgatatctacttcattacctacc
actgcattcaatcctaccagcttgggcagagaggaagctttgcctacagatacatcggtt
ccaacaacaactcgttattttcgtcaaggatatccagatgagattaatgcgacttcagac
agagataacctgccgtcaacagaaatcataccaggcgaaagtggtctgataaattcagtt
gccgtgcctgaactcaggggcgaaccaggtcggccaggagacgccggtcgtccaggcgac
gttggatatcctggacaacccggaacaccaggaattccaggtcctccaggaccgcctggg
tctgtacctgatgtgtcaatgtactatcaacaattggctttgtcccaaggaagtgaagat
aaagggcctacaggattagcatcaccttatatacaaactcaaatgggccctgttggtcca
cgtggtccaccaggtccacctggactatcaggtccgcaaggctttcaaggtgtacgaggt
gagcctggagaacctggagctgctggtcctgcaggtgcaccaggccctcgaggactacct
ggtctgcctggaaaagatggaaacactggagaagatggagaatccggtcctccaggatca
cctggtccagttggtccaagaggtcttccaggattgtccgggcttccaggaattaaagga
catcgcggttttcctgggttagatggagcaaaaggggagcaaggtgtacaaggagagaaa
ggctctctgggagcacctggaccaatgggtataatgggcccagtgggccctgctggtcca
cgtggtgaacggggtagagaaggtccaccaggacctccaggaattagaggagtagatgga
atcccaggtcctccaggacagcctggtgcggtaggtaaatctggcccacctggttatcct
ggtagtcctggtatgaaaggggatcaaggagctcaagggccaaagggaagtcaaggttta
caaggtccacgaggagaaacgggccgcccaggacaacccggtgaatcaggtcctcaaggg
ccacaggggaaagacggaattcctggagaaaaaggaagtacaggatcaccaggactagta
ggcacgcctggttttcctggagctcgtggtcaacctggaatacctgggaatcctggtacc
cctggaatgaaaggaatgcccggacttccaggtgaaagaggatttagaggagacagtgga
tcaaaaggtgacgcaggtgctcaaggtccgcgaggcttacctggttctcctggaaatgaa
ggcaaaaggggaaaacggggaatgcgtggacccagcggttccatgggacctcctggagaa
cgtggaaatcctggggtaccaggacctcctggaattgatggacctatggggccaaaaggt
caatctggagaccgtgggttagttggaccacctggaccaaagggtggtataggagatcct
ggacgtcctggaccagcaggattgcagggtacacgaggtacaatgggtcgccctggtgcc
cctggaaaaccaggtaatccaggagatagaggaattcaaggtgccgatggaaaacccggt
gaacaaggcccacctggtatacaaggtgtgcctggactgataggtcctacaggtgaaaaa
ggatacccgggtgaaccaggtaaggctggagaaccaggaaatcctggaccaccgggtcct
agaggtgacacaggtaaggaaggagctacaggttcgcaaggctcaccaggcccatcagga
gcagatggtgaacgaggtcctccaggtgctcctggtgctagaggtttccaaggttttcca
ggagcaggtggtaacccaggtacaccgggtaaagatggagaaccaggtgtacagggacca
ccgggtccagctggtgcatctggtaatagaggtgaacgtggatttcctggtgagagggga
caagctggtgtaccaggactgcctggaccgaaaggagaacggggaacgcaaggacttgat
ggacctttgggatttccaggagaaaagggagatagaggaaatcctggtcttccagggttg
ataggcataccgggattgaggggtattccaggagaatcaggtccaaaaggagaaagagga
tccactggtccatttggacccgaaggaccaccaggacgaattggagaacgtggaccacaa
ggtttagtaggtccaacaggtccaccaggggaaccagctgaacgaggcgaccctggttca
cctggttcaccgggagaagtcggtgctcctggtgctccgggagaaagaggaccgcaagga
gtgcagggatcgccaggatttccaggacctcaaggacttattggtttaccaggattgaaa
ggcgaccggggttatccgggttcgaaaggagatcaaggaaactctggccttccaggtacc
cctggtgaaactgggccaatgggcttgactggattgacgggagctaaaggagtgaggggt
gaaccaggtcttagaggagaacctggtgctatgggacaacctggaataccgggagcagtt
ggcgcagcaggtccacctggcccaagtggaccatctggctctcctggactacaaggtatc
aagggtgcagctggagaaacaggacgtactggaagtactggaccaactggattcccggga
ttatctggagcggatggaaccaagggcgaaagtggatctgaaggacctgcaggtgcacct
ggcccacaaggcccacaaggtactcctggcgaaagaggtataccagggtttgcaggacca
cctggaccagtcggtgctcgtggattacgaggtccatctggtgagactggagcacctgga
aaaccggggtcagaaggtccacaaggacctcctggcttaatcggaccaataggtccaact
ggaccaactggagaagtaggaccagaaggtcccattggtaaaccgggaattcctggatta
tccggccgtcctggagacaaagggccacctggtattgctggaccaacaggattaccaggt
ccaccaggtttacagggacaacctggtcaagcagggcctgcaggagcagctggagaaaga
ggcccaaaaggggaagctggaccgcagggtgtagaaggacaacaagggctcagaggaaaa
cctggacccataggattagaaggaccaaagggtgatcgcggagaagagggcctgaaaggt
tccaaaggacacagaggatttactggtctgcaaggtttacctggatctattggtccagca
ggagaaaaggggcctcccggttctccaggtgtacctggcaaggatggagaacctggcatt
agaggtagtccaggaagagacggtagtcctggtctgattggattatctggtaatcctggt
ccgaaaggacctcccggtgacgagggtcgtcatggaccaccaggtttgcctggtcctcca
ggacccccaggtccaccgggtgaagttggattaggatatgatgctgcctccttagctgct
cttttatcacaaggtcaaactaaaggtccagacccactattaggcgatgaaccacctaga
atatttagtaaagatatatcagaagaagaaagacgacaactcatattaaaagcatacaaa
catttaagttcatctttcaagaagtttgttaaaccagatggtgaaaagaattctccagct
aagacatgtagggatctttacgttgcctatccagataaaccttcaggagagtattggata
gacccaaatgaaggtgatgctagagatgcaattttagtgtattgtgatgctaaaagacgt
gcaacatgtttactgccaaacccagtacgttccccagaaattacatacatcactgatcaa
gttgaaacttggttaagtgacattgaaaatggaatgaagattacttataaaacagacagt
aatcaagttgggttcctacaattattatcaaagagtgcatctcaaaatataacataccac
tgtaaaaatagtgtagcgtacttcgattctgaacgaaaaacatacagaaagggtatgaaa
ctattatcatggaatgatgctgaattaacaccacgtggaaatcaacgcctcaaatatgaa
atgataatggatgattgtaagctacgtagcgaagaatggggcaaaactataatctcatat
gaaactgataaacctataaggttgccgataatagatattgctctaagggacattgggaaa
cctgagcaaagtttctatgttgaaattggggctgcttgttatgagtaa
DBGET
integrated database retrieval system