Megalopta genalis: 117221456
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Entry
117221456 CDS
T07400
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3-like
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
mgen
Megalopta genalis
Pathway
mgen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117221456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgen03019
]
117221456
Messenger RNA biogenesis [BR:
mgen03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117221456
mRNA degradation factors
3'-5' decay
Pan complex
117221456
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
117221456
NCBI-ProteinID:
XP_033328345
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MDPSMFVAYNPHTNGVPLESKLATYMNRHSQGVVLNTPALTKHLAGLTLDSQKKVTASPE
FVPGRCLNNSSSSSSPNLFNNSYHSQENVGGTTYFYLGNAASESVGTEEGTETIGTAGTS
QIGYVYPGTPSHLQPVKPAKPPSSNNSSAPSTPPPQATPSFFISESLRMDILQKNALTLA
QPDIAQFPDLPDEVDNYHELCPLEPIHKPASTMLGYQTSTYKATSIKSGTRYCLRRIHDF
RLANTKCMVLVDMWKRLSHTNLVQLREVFTTKAFGDHSMVFVYDYHPGSETLLNKDFSAT
ELNGYTDPFSSDPNAPRPYSHTKNTILRQQQSSMLPESVIWSYIIQLTAAVRVIHAAGLA
YRCLDPTKVLLTSRTRLRLSCAAIPDVVTFDGNAATPLSLIPHYQQEDLIALGKLVLALA
CRSLLAVHRDNMQASLELVARTYSTDLRNLILYLLSNQTRRSVTDLMPMIGARFYTQLDA
ALLRSDEMEDELAKELENGRLFKLIVKLATINERPELNMEPTWAETGDRYMLKLFRDYVF
HQVLADGRPWLDMAHVVYCLNKLDSGSQDKICLTSRDGQSVLVVSYAELRQCLETSFGEL
VQSAKETV
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggacccatcaatgtttgttgcgtataatcctcatacaaatggcgttccactagagtcc
aaacttgctacctacatgaatcgacacagtcaaggagtagttctaaatacccccgcactt
acaaaacatttggcgggccttactttggattcgcagaaaaaggtaactgctagtccagaa
tttgtaccaggaaggtgtcttaataacagcagcagcagcagctctccgaatcttttcaat
aattcttatcattctcaagaaaatgtgggtggtacgacttatttttaccttgggaatgct
gccagcgagtctgtgggaacggaggaaggaactgaaactattggaactgcaggaacaagt
cagataggatacgtctatccgggcacgccctcgcatctgcaacctgtgaaaccagcgaaa
cctccatcgtccaataactcgtcagctccgtcgactccgccgcctcaggcaacgcctagt
ttctttatcagtgagagcttacgaatggacattcttcaaaagaatgcgttaacgttagca
caacccgacattgcacagttccccgacttaccagacgaggtagacaattaccatgaattg
tgtccgctagaaccgattcataaacctgcctcaaccatgcttgggtaccaaacttcaacg
tacaaagctacgagcatcaaaagtggtacaagatactgtttgcgtcgcatacacgatttc
agacttgccaacacaaagtgtatggtgctggtagatatgtggaaacgattatcgcatacc
aatttggtacagttgagagaagttttcactaccaaggccttcggcgatcattccatggta
tttgtctacgactatcatcctggctccgaaacattactgaacaaggatttctcggcgacc
gaattaaatggctacacggatccgttctcgtcggatccaaacgcgcctcggccatacagt
cacacgaagaacacgatcctcagacaacaacaaagtagtatgttaccagagagtgtaatc
tggagctacataattcaattgaccgccgccgttcgagttatacacgctgctggtttggct
tacagatgtttagacccaacaaaagtgttgctcacgtcgcggacaagacttcgtttaagc
tgcgccgctataccagacgtggtcacattcgacgggaacgctgccacaccactctcgcta
attccacattaccagcaagaggatctaattgccctagggaaattggtgttggctttagcg
tgtcgcagcctccttgccgtccatcgcgacaacatgcaagcctctctcgaactcgtcgca
cgtacctattccacggatttacggaatcttatattgtatctactttccaatcaaacacga
aggagcgtgacggatctcatgccaatgatcggagcccgattttatacgcaattggacgcc
gctctactgcgatccgacgagatggaagatgagcttgccaaagagctcgagaacggcagg
ttattcaaattgatcgtgaaactggccaccatcaacgaaagacccgagcttaatatggaa
ccgacatgggcagaaacgggtgaccgatacatgctcaaattgtttagggactacgtgttc
caccaggtactggccgatggaagaccatggctggacatggcacacgttgtatattgttta
aataagttggattcaggatctcaggacaaaatatgtttgacgtcgcgagatggacaaagt
gtattggtagtaagctacgccgagttacggcaatgcttggaaacctcgtttggagaactg
gtacaatctgcgaaggaaactgtctag
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