Megalopta genalis: 117221971
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Entry
117221971 CDS
T07400
Name
(RefSeq) uncharacterized protein LOC117221971
KO
K15542
polyadenylation factor subunit 2
Organism
mgen
Megalopta genalis
Pathway
mgen03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mgen00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117221971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgen03019
]
117221971
Messenger RNA biogenesis [BR:
mgen03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117221971
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WD40_RFWD3
eIF2A
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_WDR41
Beta-prop_WDR11_2nd
WD_LRWD1
Beta-prop_SPT8
Beta-prop_ACSF4
WDR54
Motif
Other DBs
NCBI-GeneID:
117221971
NCBI-ProteinID:
XP_033329258
LinkDB
All DBs
Position
Unknown
AA seq
1054 aa
AA seq
DB search
MSANTQFANPPPAISLPNMSVPPPATPNLSAPPPNLTTINTSGSYQHRYTNHRDGARGFF
KPFRPYHAPKIVAAGQDSLQDEFDGKRLRKSVMRKTVDYNSAIIKSLENRVWQRDYRDRR
ALQPDVMYYPDLLPPPSYVDNPINAVTTRFVKTATNKMRCPIFCMAWTPEGRRLVTGASS
GEFTLWNGLTFNFETILQAHDSPVRTMVWSHNESWMVTGDHAGYVKYWQSNMNNVKMFQA
HKEAIRGLSFSPTDHKLATCSDDGTVRIWDFLRCHEERILRGHGADVKCVHWHPQKSLVI
SGSKDNQQPVKLWDPKTGQSLATLHAHKSTVMDVKWNENGNWLVTASRDHLLKLFDLRNL
SQEVQTFRGHKKEASSVAWHPSHEGLFCSGGSDGAILFWHVGADKEVGAIEQAHDSIVWT
LAWHPLGHILCSGSNDHTSKFWTRNRPGDLMRDKYNLNTLPAGSAGIDDHEIADEAAVIP
GMGPEDRINADGEPEDKSGGIPGLDLDHAVDEGKKFANKKVPYSKPIPRNFQAQWNEMEA
EDMEQVEALNAFVNQLIETTPGAVPLNEVTPNGIILYGKMIPVEPGSKLAEAISKGNDAI
NKLVFSGEVEELRDVVGPPDNVDEADEFLQDDGDIDYSKVPDIELPPPLPSSKFAQNPEL
LKTLNRGGKRKFDQLIGWSDGGASDRTSKIHQPVFGGVMTEDSQSSDTDLRYTCSKGNQH
SNDNNSFHAGQDEDLRKLPHGDNARNMNRGDEDLRFNISSGPGRPSSRSDYDVRSNYVDK
DFRSSHGFPLKKPLDNDIYDDRDRDGSSRWDDEKSMNDGARKGDGSFSNNFDKRDNMPMG
IGPGISNNMSHLSNSISHMSSHHNMQNINPNMPPPIPSLVPHPNMSQHPMQNKPLHPGMQ
GMDGPMHMMHHPNMHPGFGPNGPPPGNFGPNFRPPNGNFGPNQHFRPSPLPLFGSNQGPF
GNSFQGLPNFRGPNAGPPNFDRPGFGPGFRGQNPGQNAPNNFNSNFGNFGNKLGPNRVMN
RGPNDNNMGRSGYNNRGRGRDGDQPRGIRGRDNY
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaaatactcaattcgcaaatcctccgccagctataagcttacctaatatgtcg
gtaccaccacctgcaactccaaatttatcagctccacctcccaatttaactaccatcaat
acatctgggagctatcaacatcgatacactaatcacagagatggagctcgtggtttcttt
aaaccattcagaccataccatgctcccaaaattgttgctgctggtcaagatagtttgcaa
gatgaatttgatgggaaaagacttagaaaatctgttatgcgcaaaactgttgattataat
tctgctattataaaaagcttagagaatcgagtatggcaaagggactatcgggacagacgt
gctcttcagccagatgtaatgtattatcctgacttactcccaccacccagttatgttgac
aatccaataaatgcagtcacgacaagatttgtgaagactgcaacaaataaaatgcgttgc
cctatcttttgtatggcatggacaccagagggcagacgcctggtcactggtgcatccagc
ggagagtttactctatggaatggccttacttttaattttgaaactattttacaggcacat
gatagtccagtgaggacaatggtatggtcacacaacgagagctggatggttacaggagat
catgcaggctacgtgaagtattggcagagcaacatgaacaacgtcaagatgtttcaagct
cacaaagaagctattagaggactcagtttcagtccaacggatcataagctggcaacatgc
agtgatgatggaactgtgagaatatgggactttcttcggtgtcatgaagaacgcatcctg
agaggtcatggtgccgatgtaaaatgtgtgcactggcaccctcaaaaaagtctagtcatc
tctgggagcaaggacaaccagcaaccggttaaattatgggatccaaagactggtcagtcg
ctcgcaactttacatgctcataagtcaacagtcatggacgtgaaatggaatgaaaatgga
aactggttggtaactgcgtcacgagatcatttgctcaagttattcgatctcaggaaccta
agccaagaagttcaaacgtttcgtggtcataagaaagaagcttctagtgtcgcgtggcat
ccgagtcatgaaggcctgttctgtagcggcggtagtgatggcgctattttattctggcat
gttggagccgacaaagaagtgggtgctatagaacaagctcacgacagcatagtttggacg
ttagcttggcacccattaggacatatactttgctccggtagcaatgaccatacttcaaag
ttctggacacggaacaggcctggtgacttgatgagagataagtataatctcaacacgtta
ccagcgggatctgctggtattgacgatcatgaaatagctgacgaagcggctgtaatacct
ggtatgggaccagaagacagaatcaacgctgacggcgaaccggaagacaaaagcggtgga
attccaggtttggatttggatcatgctgttgacgaagggaagaaatttgcgaacaagaag
gtaccgtatagtaaacctattccacgaaacttccaagcacagtggaatgaaatggaagct
gaagatatggaacaagtcgaggcactaaacgcgttcgtgaatcagttgatcgaaactacg
ccaggagcagtgcctctgaacgaagtcacacctaatggtattatattgtacgggaaaatg
attcctgttgaacctggttccaagctagcggaggcaattagcaaaggaaacgatgctata
aataaattagtattctctggcgaagtagaagagctacgggacgtcgttggtccaccggac
aacgtggacgaggcggatgaatttttgcaggacgacggcgacatagattattccaaggtt
cctgacatcgaacttcctccaccgttacctagttctaagttcgcacaaaaccctgaacta
cttaagactttaaatcgtggtggaaaacggaaattcgatcagctgatcggttggagcgac
ggtggagccagcgacaggacgtccaagatacatcagcccgttttcggcggtgtaatgact
gaagattcgcaatccagtgataccgatttaaggtacacttgtagcaaagggaaccagcac
tcgaacgataataactctttccacgccggacaagacgaggatctcaggaagctgcctcat
ggtgataatgctagaaacatgaaccgtggcgacgaagacttgcgattcaacatatccagc
ggacccggcaggcctagctctcgttccgattacgatgtaagaagtaattacgtcgacaaa
gatttcaggagttcgcacggattccccttgaaaaaacccttagacaacgatatttacgac
gacagagatcgcgacggtagctcgcggtgggacgatgaaaaatcgatgaacgacggcgct
cgaaaaggggatggtagtttctctaacaactttgataaacgtgataacatgccgatgggc
atcggtcccggcatcagtaataatatgtcccatttaagcaacagtatatcccacatgtcc
agtcaccataatatgcaaaatattaatcccaacatgccccctccgattccgagtttagtg
ccacacccgaatatgtctcaacatccaatgcagaataagcccttgcatcctggaatgcaa
gggatggacggtcctatgcacatgatgcatcatcccaacatgcatcccggtttcggtccg
aatgggccaccgcctggaaactttggtcccaacttccggccaccaaacggtaatttcggt
ccgaatcagcacttcaggccaagcccgttacctctgttcggatcaaatcagggaccgttt
ggcaatagctttcaaggtttgccaaatttcagggggcccaacgccggccccccgaatttc
gacagacccggcttcggcccgggtttccggggtcagaaccctggacagaatgcgccaaat
aattttaattcgaatttcggtaacttcgggaataagcttggaccaaatcgtgtcatgaat
cggggtcctaacgacaataatatgggcagaagtgggtacaacaaccgcggtagaggacgc
gatggcgaccaaccacgtggtatccgaggaagagataactattga
DBGET
integrated database retrieval system
