Megalopta genalis: 117223150
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Entry
117223150 CDS
T07400
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
mgen
Megalopta genalis
Pathway
mgen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mgen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117223150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgen03019
]
117223150
03041 Spliceosome [BR:
mgen03041
]
117223150
Messenger RNA biogenesis [BR:
mgen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117223150
Spliceosome [BR:
mgen03041
]
Complex B
Other components
Prp19-related factors
117223150
Complex C
117223150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_2
TPR_15
TPR_8
TPR_12
ARM_TT21_C
DHR-2_Lobe_A
PPR
NRDE-2
TPR_10
SNAP
Microp_apicomplexa_6
Motif
Other DBs
NCBI-GeneID:
117223150
NCBI-ProteinID:
XP_033331188
LinkDB
All DBs
Position
Unknown
AA seq
845 aa
AA seq
DB search
MTLERKDLEGNLYVFNEEDLPYEEEILRNPYSVKHWQRYIDHLKTTKSSNLNIVYERALK
ELPGSYKLWYNYLRQRVSQLKGRCITDALYEDVNNAFERALVFMHKMPRIWMDYCTLMTD
QCYITRTRQVFDRALRALPITQHHRVWPLYIEFLKKHNVYETAVRVFRRYLKLAPEDTEE
YIEYLISIGRLDEAAVKLAQIVNQDDFVSKHGKSNHQLWNELCDLISKNPSKIKSLNVDA
IIRGGLRRYTDQLGPLWNSLADYYVRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQF
EELSLSKRMEEVAKNPTADDDIDLELRLARFEHLMERRLLLLNSVLLRQNPHNVQEWHKR
VMLYEGQPHEIINTYTEAVQTVQPQLAVGKLHTLWVAFGKFYEENAQIADARVVFEKATH
VPYTKVDDLASVWCEWAEMEIRHGNYKEALKLMHRATAMPFRKVAYHDETETVQMRLYKS
LKVWSMYADLEESFGTFKTCKAVYDKIIDLKIATPQIIINYGLFLEENKYFEEAFRAYEK
GIALFKWPNVYDIWNTYLTKFLKRYGGTKLERTRDLFEQCLEHCPPKYAKALYLLYAKLE
EEHGLARHAMSVYERATSAVLPEERFEMFNIYIKKAADIYGVPKTRQIYEKAIEVLNEEN
TREMCLRFAEMETKLGEVDRARAIYAHCSQICDPRVTSNFWQIWKEFEVRHGNEDTMREM
LRIKRSVQAMYNTQVNMMSAQMLNNASNPPVDVPVDAMRLLDIKTPSTDNTAAYKDSIKF
VRGVTEKDGKAEAQVNNPDEIDIDIDDDANDNEADIEEDIPIEKQMIPSQVFGSLKTVEG
EGEED
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgacgttagaacggaaagacttggaagggaacttatatgttttcaatgaagaagatttg
ccatatgaagaggaaatcttaagaaatccttattccgtaaaacactggcagcgttatata
gatcatttaaaaactacaaaaagtagtaatttaaatattgtatatgaaagagcattaaaa
gaactacctggaagttacaaattatggtataattatctgcgtcaacgtgtaagtcagttg
aaaggacgatgtataacagatgctctttatgaagatgtaaataatgcatttgagcgtgca
ttggttttcatgcacaaaatgcctcgaatttggatggactattgtacattaatgacagat
caatgctatattactcgtactcgacaagtgtttgatagagcacttagagctcttccaatt
acgcaacatcatcgtgtatggcccttgtatattgaatttttgaaaaaacacaatgtatat
gaaactgcagtacgagtttttagaagatacttgaagttggccccagaagatacagaagaa
tatatagaatatctaatatctattggaagacttgatgaagcagctgtaaaacttgcacaa
attgttaatcaagatgattttgtttcaaagcatggaaaatctaatcatcaattatggaat
gaattgtgtgacttaatatcaaagaatccatctaaaataaagtctcttaatgtagatgct
atcatcagaggtggtctaaggcgatatactgatcagttagggcccctttggaactcttta
gctgattattatgttcgcagtggtttatttgaaagggcaagagatatttatgaggaagcg
atacagacagtaactactgttagagattttacacaagtttttgatgcttatgcacaattt
gaagaacttagtcttagtaaacgcatggaagaagttgcaaaaaatcctactgcagatgat
gatatagatttggaattaagattagctcgatttgaacatttaatggaaagacgattattg
ttacttaattctgtgctacttagacaaaatcctcataatgtacaagaatggcataagaga
gttatgctttatgaaggtcaaccacacgagattattaatacatacacagaagctgtacaa
actgtacaaccacaattagcagtaggaaagttacatacattatgggttgcatttggtaaa
ttttatgaagagaatgcacaaatagctgatgctagggttgtttttgaaaaggcaactcat
gttccttatactaaagttgacgatctcgcttctgtgtggtgtgaatgggcggaaatggaa
attagacatggcaattacaaggaggcgctaaaactcatgcaccgagctactgccatgcca
ttccgcaaagtggcctaccatgatgaaacagaaactgtacaaatgagattgtacaagtct
ttgaaagtttggtctatgtacgccgatttggaagaaagttttggaacatttaagacatgc
aaagctgtgtatgacaaaatcatagatttaaaaattgccacaccacaaattatcattaat
tacggactctttctagaggaaaataagtattttgaagaagcctttagggcttatgaaaaa
ggaattgcacttttcaaatggcccaatgtttatgatatatggaatacttatcttacaaaa
ttcttaaaacgttacggtggcactaaattagaaagaacacgagatttgtttgaacaatgc
ctcgaacactgtccaccaaaatatgccaaagctttgtatttattgtatgcaaaattagaa
gaagaacatggtttagccagacatgcaatgtcagtgtatgaacgggcaacaagtgcagta
cttcctgaagaaaggtttgagatgttcaatatatacataaagaaagcagcggacatttat
ggtgtaccaaagacacggcaaatatatgaaaaagctattgaagttcttaacgaagaaaat
acaagagaaatgtgtctacggtttgcagaaatggaaacaaagttaggagaagttgacaga
gctagagcaatatatgcacattgcagtcagatatgtgatccaagagtaacgtcaaatttc
tggcaaatatggaaagagttcgaagtgagacacggcaatgaagatacaatgcgtgaaatg
cttcgaattaaacgcagcgttcaagctatgtataatactcaagtgaatatgatgtctgca
caaatgttgaataatgcatcaaatccacccgttgatgtaccagtggacgctatgcgactt
ttggatattaaaacaccaagcacagacaatactgctgcctacaaggatagtattaaattc
gttcgtggtgtaacggagaaagatggcaaagcagaagctcaagtgaataatccggacgaa
atagatattgatatagacgatgatgccaatgataacgaggcagatatagaggaagatatt
cctatcgagaaacaaatgataccgtcacaagtgttcggtagtttaaaaacagttgaaggt
gaaggagaagaagattaa
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