Megalopta genalis: 117223274
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Entry
117223274 CDS
T07400
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
mgen
Megalopta genalis
Pathway
mgen04382
Cornified envelope formation
mgen04512
ECM-receptor interaction
mgen04518
Integrin signaling
mgen04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mgen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117223274
04518 Integrin signaling
117223274
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117223274
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117223274
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mgen04147
]
117223274
00536 Glycosaminoglycan binding proteins [BR:
mgen00536
]
117223274
Exosome [BR:
mgen04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
117223274
Glycosaminoglycan binding proteins [BR:
mgen00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117223274
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
117223274
NCBI-ProteinID:
XP_033331384
LinkDB
All DBs
Position
Unknown
AA seq
1917 aa
AA seq
DB search
MTRLGLRFVASAIFLAGIVNGQWSGNPQPVVPLGRGDIGKPKNSDDDYNPSQRWKHFLTN
NEGSEEDKPYVDNYDDDRTDDDGYDRTPDGRDYRPGGYPYDDADRNGGYNEGQDRGAPDP
YNPAAGGDYQGRRREYDDRYDRPPVDNRGSGDPYSHGSSYGRGSTGNTGYSQSQGGYGAA
GSSDNYPSSYSAVPIPGRAPQNCTGSACCVPKCFAEKGSRGPPGIMGPQGPKGQRGFPGT
EGLLGPKGEKGDPGPQGSRGLKGDRGKMGIPGFPGINGVPGVQGPPGAPGFPGRDGCNGT
DGEPGHAGVHGEQGPRGFKGPPGLKGEKGQSAFAGSFPVGQKGEPGIDGVRGPPGPPGPQ
GDRGFTGPKGDRGPYGQSGPLGPKGEKGNMGLRFEGAKGDKGQKGEQGPQGTPAPELPFV
GVTEITGPPGEPGEKGDKGDMGYDGVKGEPGLRGDHGITGSSGGKGEKGLPGAPGIRGRD
GFSGPPGPPGRKGDRGYDGLDGLPGHPGKKGESGREGSMGVPGLRGPPGPPGGGKGTPGP
PGPKGPQGFPGPTGPRGTDGYPGDPGPRGPVGSAGGPGSQGIPGPEGLPGDKGAKGEPGI
TGFPGPTGLRGFDGPQGPPGSRGLPGEKGLSIAGPKGMDGAPGLNGEKGQKGERGYVGPR
GFPGDSLDGIPGLPGESGLPGEPGNSGRDGIPGAPGSTGEKGELGGRCIDCLPGLRGPKG
DRGLDGSPGITGPRGPPGERGFPGEPGADGLPGSIGPPGQPGNDGIPGAPGPQGESGTPA
TISWDMIKLEKGDKGVRGEPGRMGPQGPQGPIGEKGAIGLEGFPGLKGAAGDRGFPGQEG
VPGRPGVPGRKGESGLSIKGEPGEPGWPGQRGDKGEPGFDGDRGEPGECPPLNITEGLKG
NRGFPGEKGAPGLPGREGFKGDKGLQGFAGPAGPPGAIGGPGPVGARGLPGPRGEKGNIG
PMGFPGEPGREGPRGFPGAPAPKGEKGESGISMKGARGLTGPSGEKGEKGLPGPPGKDGP
VGFPGLPGFAGEKGDLGIPGISGLPGAPGEKGDTGPIGPPGPPGVAGTPGIDGNKGEPGL
TGEPGRPGLPGFPGTKGDRGEPGIDGQKGYPGRRGLPGSPGRAGIAGLIGMKGERGEKGS
PGFPGLRGLDGKPGRTGQPGNKGDAGPTGNPGAPGPVGFDGPKGDLGPVGFPGRKGEPGL
VSEKGQKGEPGMPGIRGPPGAPGRDGIDGIKGEAGIPGLGRDGAPGPKGDAGIPGRDGLP
GLTGEKGDTGVRGYPGVKGDQGPYGPPGEPGTPGIDGLPGEPGDIGLPGPRGFPGLDGKM
GAPGQPGLNGVKGDRGLSGPTGFPGSPGIIGEKGDRGPPGPTIQVKGEKGEPGIPGRQGF
HGEKGDQGLEGLAGYDGEKGDRGPPGPIGNPGIPGAMGVKGDEGLVGPSGLPGVTIKGEK
GLPGLPGKHGREGIPGIPGQKGEQGLPGLPGHKGNQGPYGPPGPIGEKGDTGPDGIPGSP
GKDGLPGPEGIMGPPGFEGKKGDNGLPGLSGLPGQKGEPGPRGPSGLDGLPGEKGERGWD
GVNGSPGAPGPKGDRGYAGQTGMVGVPGFTGVKGDKGDDCIEPPMGPKGDRGHPGPPGQI
GQPGEKGLPGPAGFPGLDGLKGMEGIAGSAGPPGLPGLPGRIGVPGAPGLQGPPGALGAP
GEPGLPCEASPDYLTGFLLVKHSQSQSVPVCERGHIKLWEGYSLLYTDGDERAHSQDLGS
AGSCVRKFSTMPFLFCDVNNVCHYASRNDRSYWLSTNSPIPMSPLEETAIEEYISRCVVC
EVPANVLAVHSQSLNIPDCPNGWTGLWIGYSFVMHTGAGSQGGGQSLSSTGSCLEDFRAT
PFIECNGAKGHCHYYANEFSFWMATIEGQFQRPEKQTLKAGNLRSRISRCQVCIKDT
NT seq
5754 nt
NT seq
+upstream
nt +downstream
nt
atgacccggttgggattgcgattcgtcgcatccgcaattttcctggccgggattgtcaat
gggcaatggtcgggcaatccacaacccgtggtgccattggggcgaggtgatataggaaaa
ccgaaaaacagcgatgacgactacaatccttcacaacgatggaaacatttccttacgaat
aacgaaggttctgaagaagataagccatacgtagacaactatgacgacgatcgaaccgac
gatgacggttatgacagaacacccgatggtcgcgattatcggcctggaggatatccgtat
gatgatgccgacagaaatggaggctacaacgagggacaagatcgaggtgctccggatcct
tacaatccagcagccggtggtgattatcagggaagacgtcgtgaatacgacgacagatat
gatagaccacctgtggataatcgtggatctggggacccttacagccatgggagttcatac
ggtcgtggatcgactggtaatacaggatactcacaaagtcaaggaggatatggagcggct
ggaagttcggacaattatccgagcagttattcggccgtaccaattccaggacgtgctccg
caaaattgtacggggtcagcatgctgcgtaccgaaatgtttcgcagagaaaggttcccga
ggtccaccaggtataatggggccacaaggtcccaaaggtcagagaggatttcctggaaca
gaaggtctcctaggtccaaaaggggaaaaaggtgatcctggacctcagggatcacgtggg
ttgaagggtgacagaggaaaaatgggtatacctggatttcctggcataaacggtgttcct
ggagttcaaggtccgccaggagctcctggttttcccggacgtgatggatgcaatggaact
gacggtgaacccggtcatgccggtgttcacggagaacaaggtccccgtggttttaaaggt
cctcctggccttaaaggagagaaaggacaatcggcatttgcagggtcgtttcctgttggt
caaaaaggtgaaccgggtatcgatggtgtgagaggtcctcctggaccaccaggaccgcaa
ggagaccgtgggttcactgggccaaagggtgatcgtggcccttacggacaatctggacca
ctaggtcctaagggagagaaaggaaacatgggattacgattcgagggtgcgaaaggtgat
aaaggtcagaagggtgaacaaggacctcaaggtacacctgctcccgaattacctttcgtg
ggggtgacagaaatcacaggacctccgggtgagcctggagaaaaaggagataagggcgac
atgggatatgatggagtaaaaggtgaaccaggtttacgtggcgatcatggtataactggc
agttctggtggaaaaggagagaaaggtttgccaggtgccccgggtatacgaggcagagat
ggtttctctgggcctccaggtccacctggtcgcaaaggtgatcgaggttacgatggttta
gatggattgcccggacatcccggtaagaaaggagagtcaggacgtgaaggctccatgggt
gttccaggattgcgaggacctcctggcccaccaggaggcgggaaaggcacaccaggtccg
ccagggccgaaagggccccaagggttcccaggtccaactgggccacgaggtactgatgga
tatccaggagatccaggaccgagagggccagtgggttcagcaggaggccccggttcacaa
ggcattcctggtcctgaaggtttgccaggagataagggagcgaaaggggaacccggtatc
acaggatttccaggaccaacgggacttcggggttttgatggtccacaaggtcctccagga
tcacgaggtttacccggagaaaaaggattatcgatagcgggtccgaaaggaatggacggc
gcacctggtttaaatggagaaaaaggacagaaaggcgaacgtggttacgttggaccaaga
ggattcccaggagattccttagatggaattccaggattgccgggtgaatctggtttaccg
ggagaaccaggaaattctggaagagatggtattccgggtgctccaggatctactggtgaa
aaaggagaactaggagggcgctgtatagattgtctgcctggcttgcgaggacctaaagga
gatcgcggtttagacggtagccctggaattactgggcctcgaggaccacctggagaacga
ggttttcctggagaacctggtgccgatggattaccaggatccattggtccaccaggacaa
ccgggaaatgacggtattcccggcgcaccaggacctcaaggagaatctggcacaccagca
acaatatcgtgggacatgataaagttagaaaagggtgataaaggcgtacggggtgaacca
ggccgaatgggaccgcagggtccacaaggtccgatcggagagaaaggtgcaattggattg
gaaggattcccgggacttaagggtgccgctggtgatcgcggttttcctggacaagaaggt
gtccctggcaggccaggtgttccaggtcgtaaaggagaaagtggtctgagtataaaagga
gaacccggagaacctggttggcctggtcagcgtggtgacaaaggtgaacctggttttgac
ggagacagaggcgaacccggtgaatgtccaccgttaaacattacggagggtttaaaaggt
aacagaggatttccaggagaaaaaggagcacctggattacctgggagagaaggattcaag
ggtgataaaggcttacaaggttttgcggggcctgctggaccgccaggtgcaattggtggg
cccgggccagttggagcacgaggattgcctggtcctcgtggagaaaagggtaacatagga
ccgatgggctttcctggtgaacctggtcgcgaaggaccaagaggattcccaggtgctcca
gctccgaaaggagagaagggtgaatctggaatatcaatgaaaggcgctcgcggtttgacc
ggaccatctggcgaaaaaggagagaagggtcttccaggtccaccaggaaaagatggtcct
gttggtttcccaggtttaccaggatttgctggagaaaagggtgaccttggaattccggga
ataagtggtttacctggtgcgccaggagaaaaaggagacacaggtccaattggtcctcca
ggtcctcctggtgtagcaggaactcctggcattgatggcaataaaggtgaaccaggattg
acaggagaaccgggtagaccaggtctaccaggttttccaggcacgaaaggggacagaggt
gaaccaggtattgacgggcagaagggatatcctggacgacggggtctacctggttcgcct
ggtcgagctggaatagcaggtttaatcggcatgaagggtgagcgtggagagaaaggttca
ccaggattccctggattgcgtggcttagatggaaaaccaggtcgcacgggacaacctgga
aacaaaggagatgcaggtcctaccgggaatcctggtgcgccaggccccgttggattcgac
ggacctaaaggtgatctaggtccagtgggattcccaggccgtaaaggagaacctggcctg
gtgtcagaaaaaggacaaaaaggtgaaccgggaatgccaggaattcgtggacctccagga
gctccaggaagggatggtatagatggtatcaagggagaagctggaatacctggtcttgga
cgtgatggtgcgcctggtccgaaaggtgatgccggcataccaggtcgtgatggtttacct
ggactgacgggtgagaaaggagacaccggtgttagaggatatcccggcgtgaaaggagat
caaggaccgtatggcccgccaggtgaaccaggaacgcccggcatcgatggattacccggt
gaaccaggtgatatcggtttgcctggtccccgtggtttcccaggattagacggaaaaatg
ggagctcccggtcaaccgggtctcaacggcgtaaaaggagatcgcggtctttcaggtcct
actggattccctggatcgcctggtattatcggagagaaaggtgatcgtggaccacctggg
ccaacaattcaagttaaaggtgaaaaaggtgaacccggtattcctggtcgacaaggtttc
cacggagagaagggtgatcaaggattggaaggtttggctggatatgacggtgagaaagga
gacagaggcccaccaggtccaatcggaaatcctggaataccaggagctatgggtgtaaaa
ggggatgagggactggttggaccatcaggtctccctggagtaactattaagggtgagaaa
ggtttaccaggactacctggaaagcatggacgagaaggaatacccgggatacctggacaa
aagggagagcagggcttgcctggtctaccaggtcataaaggaaatcagggcccctacggg
cctcctggcccgattggtgaaaagggtgacacgggtcctgacgggatacctggttcacca
ggtaaagacggtttaccaggtcccgaaggaataatgggcccgccaggttttgaaggtaaa
aaaggagataatggattaccaggattaagtggtctacccggacagaagggagaaccaggg
ccccgagggccaagtggattggacggattacccggagaaaaaggtgaaagaggttgggac
ggtgtaaatggttctcctggagctcctggaccgaagggtgatagaggttacgctggtcag
actggaatggtgggtgttcctggttttactggtgtcaagggcgacaaaggtgatgattgt
attgaaccaccgatgggaccaaaaggtgaccgtggacatcctggacctccaggtcaaata
ggacaaccaggggagaaaggtttgccgggaccagcaggattcccgggattggacggactg
aaaggtatggaagggatcgcaggatctgcaggaccacccggtctccctggtttgcctgga
cgtattggcgtaccaggagcaccaggtttgcaaggtcctccgggagctctgggtgctcca
ggagagcccggactaccatgcgaagcatcacctgattacctgactggtttcctgttggtc
aaacacagtcaaagccagtcggtacctgtttgtgagcgcggacatatcaaactctgggaa
ggatacagtttattgtatacagatggcgatgaaagagctcattcgcaagatttaggttcc
gccggatcctgtgtaagaaagttctcaacaatgcccttcctattctgcgatgtcaacaac
gtctgccactacgccagccggaacgatcgttcttactggctgtcgaccaatagtccaatt
cccatgtcgcctttagaggaaacagcaatagaagaatatatctccagatgtgtagtatgc
gaagttcctgcgaatgtgctagccgtacacagccagtcattaaacattccagattgtccg
aatggatggaccggcctttggatcggatacagttttgtcatgcatactggtgccggttct
caaggcggtggacaatcattgtccagcactggatcttgtttagaggacttccgtgcgaca
cctttcatcgagtgtaacggcgctaaaggacactgccattactatgcgaacgagttcagc
ttttggatggccactatcgaaggtcaattccaaaggccagagaaacaaacattgaaggca
ggaaacctcagatcgcgaataagtcgttgccaagtgtgtataaaggacacgtag
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integrated database retrieval system
