Megalopta genalis: 117223274
Help
Entry
117223274 CDS
T07400
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
mgen
Megalopta genalis
Pathway
mgen04512
ECM-receptor interaction
mgen04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mgen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117223274
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117223274
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mgen04147
]
117223274
00536 Glycosaminoglycan binding proteins [BR:
mgen00536
]
117223274
Exosome [BR:
mgen04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
117223274
Glycosaminoglycan binding proteins [BR:
mgen00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117223274
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
117223274
NCBI-ProteinID:
XP_033331384
LinkDB
All DBs
Position
Unknown
AA seq
1917 aa
AA seq
DB search
MTRLGLRFVASAIFLAGIVNGQWSGNPQPVVPLGRGDIGKPKNSDDDYNPSQRWKHFLTN
NEGSEEDKPYVDNYDDDRTDDDGYDRTPDGRDYRPGGYPYDDADRNGGYNEGQDRGAPDP
YNPAAGGDYQGRRREYDDRYDRPPVDNRGSGDPYSHGSSYGRGSTGNTGYSQSQGGYGAA
GSSDNYPSSYSAVPIPGRAPQNCTGSACCVPKCFAEKGSRGPPGIMGPQGPKGQRGFPGT
EGLLGPKGEKGDPGPQGSRGLKGDRGKMGIPGFPGINGVPGVQGPPGAPGFPGRDGCNGT
DGEPGHAGVHGEQGPRGFKGPPGLKGEKGQSAFAGSFPVGQKGEPGIDGVRGPPGPPGPQ
GDRGFTGPKGDRGPYGQSGPLGPKGEKGNMGLRFEGAKGDKGQKGEQGPQGTPAPELPFV
GVTEITGPPGEPGEKGDKGDMGYDGVKGEPGLRGDHGITGSSGGKGEKGLPGAPGIRGRD
GFSGPPGPPGRKGDRGYDGLDGLPGHPGKKGESGREGSMGVPGLRGPPGPPGGGKGTPGP
PGPKGPQGFPGPTGPRGTDGYPGDPGPRGPVGSAGGPGSQGIPGPEGLPGDKGAKGEPGI
TGFPGPTGLRGFDGPQGPPGSRGLPGEKGLSIAGPKGMDGAPGLNGEKGQKGERGYVGPR
GFPGDSLDGIPGLPGESGLPGEPGNSGRDGIPGAPGSTGEKGELGGRCIDCLPGLRGPKG
DRGLDGSPGITGPRGPPGERGFPGEPGADGLPGSIGPPGQPGNDGIPGAPGPQGESGTPA
TISWDMIKLEKGDKGVRGEPGRMGPQGPQGPIGEKGAIGLEGFPGLKGAAGDRGFPGQEG
VPGRPGVPGRKGESGLSIKGEPGEPGWPGQRGDKGEPGFDGDRGEPGECPPLNITEGLKG
NRGFPGEKGAPGLPGREGFKGDKGLQGFAGPAGPPGAIGGPGPVGARGLPGPRGEKGNIG
PMGFPGEPGREGPRGFPGAPAPKGEKGESGISMKGARGLTGPSGEKGEKGLPGPPGKDGP
VGFPGLPGFAGEKGDLGIPGISGLPGAPGEKGDTGPIGPPGPPGVAGTPGIDGNKGEPGL
TGEPGRPGLPGFPGTKGDRGEPGIDGQKGYPGRRGLPGSPGRAGIAGLIGMKGERGEKGS
PGFPGLRGLDGKPGRTGQPGNKGDAGPTGNPGAPGPVGFDGPKGDLGPVGFPGRKGEPGL
VSEKGQKGEPGMPGIRGPPGAPGRDGIDGIKGEAGIPGLGRDGAPGPKGDAGIPGRDGLP
GLTGEKGDTGVRGYPGVKGDQGPYGPPGEPGTPGIDGLPGEPGDIGLPGPRGFPGLDGKM
GAPGQPGLNGVKGDRGLSGPTGFPGSPGIIGEKGDRGPPGPTIQVKGEKGEPGIPGRQGF
HGEKGDQGLEGLAGYDGEKGDRGPPGPIGNPGIPGAMGVKGDEGLVGPSGLPGVTIKGEK
GLPGLPGKHGREGIPGIPGQKGEQGLPGLPGHKGNQGPYGPPGPIGEKGDTGPDGIPGSP
GKDGLPGPEGIMGPPGFEGKKGDNGLPGLSGLPGQKGEPGPRGPSGLDGLPGEKGERGWD
GVNGSPGAPGPKGDRGYAGQTGMVGVPGFTGVKGDKGDDCIEPPMGPKGDRGHPGPPGQI
GQPGEKGLPGPAGFPGLDGLKGMEGIAGSAGPPGLPGLPGRIGVPGAPGLQGPPGALGAP
GEPGLPCEASPDYLTGFLLVKHSQSQSVPVCERGHIKLWEGYSLLYTDGDERAHSQDLGS
AGSCVRKFSTMPFLFCDVNNVCHYASRNDRSYWLSTNSPIPMSPLEETAIEEYISRCVVC
EVPANVLAVHSQSLNIPDCPNGWTGLWIGYSFVMHTGAGSQGGGQSLSSTGSCLEDFRAT
PFIECNGAKGHCHYYANEFSFWMATIEGQFQRPEKQTLKAGNLRSRISRCQVCIKDT
NT seq
5754 nt
NT seq
+upstream
nt +downstream
nt
atgacccggttgggattgcgattcgtcgcatccgcaattttcctggccgggattgtcaat
gggcaatggtcgggcaatccacaacccgtggtgccattggggcgaggtgatataggaaaa
ccgaaaaacagcgatgacgactacaatccttcacaacgatggaaacatttccttacgaat
aacgaaggttctgaagaagataagccatacgtagacaactatgacgacgatcgaaccgac
gatgacggttatgacagaacacccgatggtcgcgattatcggcctggaggatatccgtat
gatgatgccgacagaaatggaggctacaacgagggacaagatcgaggtgctccggatcct
tacaatccagcagccggtggtgattatcagggaagacgtcgtgaatacgacgacagatat
gatagaccacctgtggataatcgtggatctggggacccttacagccatgggagttcatac
ggtcgtggatcgactggtaatacaggatactcacaaagtcaaggaggatatggagcggct
ggaagttcggacaattatccgagcagttattcggccgtaccaattccaggacgtgctccg
caaaattgtacggggtcagcatgctgcgtaccgaaatgtttcgcagagaaaggttcccga
ggtccaccaggtataatggggccacaaggtcccaaaggtcagagaggatttcctggaaca
gaaggtctcctaggtccaaaaggggaaaaaggtgatcctggacctcagggatcacgtggg
ttgaagggtgacagaggaaaaatgggtatacctggatttcctggcataaacggtgttcct
ggagttcaaggtccgccaggagctcctggttttcccggacgtgatggatgcaatggaact
gacggtgaacccggtcatgccggtgttcacggagaacaaggtccccgtggttttaaaggt
cctcctggccttaaaggagagaaaggacaatcggcatttgcagggtcgtttcctgttggt
caaaaaggtgaaccgggtatcgatggtgtgagaggtcctcctggaccaccaggaccgcaa
ggagaccgtgggttcactgggccaaagggtgatcgtggcccttacggacaatctggacca
ctaggtcctaagggagagaaaggaaacatgggattacgattcgagggtgcgaaaggtgat
aaaggtcagaagggtgaacaaggacctcaaggtacacctgctcccgaattacctttcgtg
ggggtgacagaaatcacaggacctccgggtgagcctggagaaaaaggagataagggcgac
atgggatatgatggagtaaaaggtgaaccaggtttacgtggcgatcatggtataactggc
agttctggtggaaaaggagagaaaggtttgccaggtgccccgggtatacgaggcagagat
ggtttctctgggcctccaggtccacctggtcgcaaaggtgatcgaggttacgatggttta
gatggattgcccggacatcccggtaagaaaggagagtcaggacgtgaaggctccatgggt
gttccaggattgcgaggacctcctggcccaccaggaggcgggaaaggcacaccaggtccg
ccagggccgaaagggccccaagggttcccaggtccaactgggccacgaggtactgatgga
tatccaggagatccaggaccgagagggccagtgggttcagcaggaggccccggttcacaa
ggcattcctggtcctgaaggtttgccaggagataagggagcgaaaggggaacccggtatc
acaggatttccaggaccaacgggacttcggggttttgatggtccacaaggtcctccagga
tcacgaggtttacccggagaaaaaggattatcgatagcgggtccgaaaggaatggacggc
gcacctggtttaaatggagaaaaaggacagaaaggcgaacgtggttacgttggaccaaga
ggattcccaggagattccttagatggaattccaggattgccgggtgaatctggtttaccg
ggagaaccaggaaattctggaagagatggtattccgggtgctccaggatctactggtgaa
aaaggagaactaggagggcgctgtatagattgtctgcctggcttgcgaggacctaaagga
gatcgcggtttagacggtagccctggaattactgggcctcgaggaccacctggagaacga
ggttttcctggagaacctggtgccgatggattaccaggatccattggtccaccaggacaa
ccgggaaatgacggtattcccggcgcaccaggacctcaaggagaatctggcacaccagca
acaatatcgtgggacatgataaagttagaaaagggtgataaaggcgtacggggtgaacca
ggccgaatgggaccgcagggtccacaaggtccgatcggagagaaaggtgcaattggattg
gaaggattcccgggacttaagggtgccgctggtgatcgcggttttcctggacaagaaggt
gtccctggcaggccaggtgttccaggtcgtaaaggagaaagtggtctgagtataaaagga
gaacccggagaacctggttggcctggtcagcgtggtgacaaaggtgaacctggttttgac
ggagacagaggcgaacccggtgaatgtccaccgttaaacattacggagggtttaaaaggt
aacagaggatttccaggagaaaaaggagcacctggattacctgggagagaaggattcaag
ggtgataaaggcttacaaggttttgcggggcctgctggaccgccaggtgcaattggtggg
cccgggccagttggagcacgaggattgcctggtcctcgtggagaaaagggtaacatagga
ccgatgggctttcctggtgaacctggtcgcgaaggaccaagaggattcccaggtgctcca
gctccgaaaggagagaagggtgaatctggaatatcaatgaaaggcgctcgcggtttgacc
ggaccatctggcgaaaaaggagagaagggtcttccaggtccaccaggaaaagatggtcct
gttggtttcccaggtttaccaggatttgctggagaaaagggtgaccttggaattccggga
ataagtggtttacctggtgcgccaggagaaaaaggagacacaggtccaattggtcctcca
ggtcctcctggtgtagcaggaactcctggcattgatggcaataaaggtgaaccaggattg
acaggagaaccgggtagaccaggtctaccaggttttccaggcacgaaaggggacagaggt
gaaccaggtattgacgggcagaagggatatcctggacgacggggtctacctggttcgcct
ggtcgagctggaatagcaggtttaatcggcatgaagggtgagcgtggagagaaaggttca
ccaggattccctggattgcgtggcttagatggaaaaccaggtcgcacgggacaacctgga
aacaaaggagatgcaggtcctaccgggaatcctggtgcgccaggccccgttggattcgac
ggacctaaaggtgatctaggtccagtgggattcccaggccgtaaaggagaacctggcctg
gtgtcagaaaaaggacaaaaaggtgaaccgggaatgccaggaattcgtggacctccagga
gctccaggaagggatggtatagatggtatcaagggagaagctggaatacctggtcttgga
cgtgatggtgcgcctggtccgaaaggtgatgccggcataccaggtcgtgatggtttacct
ggactgacgggtgagaaaggagacaccggtgttagaggatatcccggcgtgaaaggagat
caaggaccgtatggcccgccaggtgaaccaggaacgcccggcatcgatggattacccggt
gaaccaggtgatatcggtttgcctggtccccgtggtttcccaggattagacggaaaaatg
ggagctcccggtcaaccgggtctcaacggcgtaaaaggagatcgcggtctttcaggtcct
actggattccctggatcgcctggtattatcggagagaaaggtgatcgtggaccacctggg
ccaacaattcaagttaaaggtgaaaaaggtgaacccggtattcctggtcgacaaggtttc
cacggagagaagggtgatcaaggattggaaggtttggctggatatgacggtgagaaagga
gacagaggcccaccaggtccaatcggaaatcctggaataccaggagctatgggtgtaaaa
ggggatgagggactggttggaccatcaggtctccctggagtaactattaagggtgagaaa
ggtttaccaggactacctggaaagcatggacgagaaggaatacccgggatacctggacaa
aagggagagcagggcttgcctggtctaccaggtcataaaggaaatcagggcccctacggg
cctcctggcccgattggtgaaaagggtgacacgggtcctgacgggatacctggttcacca
ggtaaagacggtttaccaggtcccgaaggaataatgggcccgccaggttttgaaggtaaa
aaaggagataatggattaccaggattaagtggtctacccggacagaagggagaaccaggg
ccccgagggccaagtggattggacggattacccggagaaaaaggtgaaagaggttgggac
ggtgtaaatggttctcctggagctcctggaccgaagggtgatagaggttacgctggtcag
actggaatggtgggtgttcctggttttactggtgtcaagggcgacaaaggtgatgattgt
attgaaccaccgatgggaccaaaaggtgaccgtggacatcctggacctccaggtcaaata
ggacaaccaggggagaaaggtttgccgggaccagcaggattcccgggattggacggactg
aaaggtatggaagggatcgcaggatctgcaggaccacccggtctccctggtttgcctgga
cgtattggcgtaccaggagcaccaggtttgcaaggtcctccgggagctctgggtgctcca
ggagagcccggactaccatgcgaagcatcacctgattacctgactggtttcctgttggtc
aaacacagtcaaagccagtcggtacctgtttgtgagcgcggacatatcaaactctgggaa
ggatacagtttattgtatacagatggcgatgaaagagctcattcgcaagatttaggttcc
gccggatcctgtgtaagaaagttctcaacaatgcccttcctattctgcgatgtcaacaac
gtctgccactacgccagccggaacgatcgttcttactggctgtcgaccaatagtccaatt
cccatgtcgcctttagaggaaacagcaatagaagaatatatctccagatgtgtagtatgc
gaagttcctgcgaatgtgctagccgtacacagccagtcattaaacattccagattgtccg
aatggatggaccggcctttggatcggatacagttttgtcatgcatactggtgccggttct
caaggcggtggacaatcattgtccagcactggatcttgtttagaggacttccgtgcgaca
cctttcatcgagtgtaacggcgctaaaggacactgccattactatgcgaacgagttcagc
ttttggatggccactatcgaaggtcaattccaaaggccagagaaacaaacattgaaggca
ggaaacctcagatcgcgaataagtcgttgccaagtgtgtataaaggacacgtag
DBGET
integrated database retrieval system
