Megalopta genalis: 117224195
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Entry
117224195 CDS
T07400
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
mgen
Megalopta genalis
Pathway
mgen03013
Nucleocytoplasmic transport
mgen03015
mRNA surveillance pathway
mgen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mgen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117224195
09122 Translation
03013 Nucleocytoplasmic transport
117224195
03015 mRNA surveillance pathway
117224195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgen03019
]
117224195
03041 Spliceosome [BR:
mgen03041
]
117224195
Enzymes [BR:
mgen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117224195
Messenger RNA biogenesis [BR:
mgen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117224195
Spliceosome [BR:
mgen03041
]
Complex C
Other components
EJC/TREX
117224195
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
117224195
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
117224195
NCBI-ProteinID:
XP_033332845
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MADNDDLLDYEDEEQTEQVVDGSGDIPSKKEVKGTYVSIHSSGFRDFLLKPEILRAIVDC
GFEHPSEVQHECIPQAVIGMDILCQAKSGMGKTAVFVLATLQQLDLIDNQVYALVMCHTR
ELAFQISKEYERFSKYMPHVKVGVFFGGLPIQKDEEVLKNTCPHIVVGTPGRILALVRNK
KLNLKHLKHFVLDECDKMLELLDMRRDVQEIFRSTPHSKQVMMFSATLSKEIRPVCKKFM
QDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMAL
AQLLTEQNFPAIGIHRGMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYD
MPEDSDTYLHRVARAGRFGTKGLAITLVSDESDAKILNDVQERFDVNITELPDEIDLASY
IEGR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaatgatgatctgttggattatgaagacgaggaacagacggaacaagtagtt
gatggaagtggggatatacccagtaagaaagaagttaaaggcacatatgtatctattcac
agtagtggatttagggattttcttcttaaacctgaaatattacgtgcaattgttgattgt
ggctttgaacatccttctgaagtgcaacacgagtgtattcctcaggcagtgattggtatg
gatatattgtgccaagcaaaatctggtatggggaagaccgcagtatttgtattggctaca
ttgcaacaattggatttaatagataaccaagtttacgctcttgtaatgtgccacacaaga
gaacttgcttttcaaattagcaaagaatatgaaagatttagcaaatatatgcctcatgta
aaggtaggcgtattttttggtggtttgccaattcaaaaggatgaagaagttttgaaaaac
acatgtcctcacattgttgttggaactcctggtcgtatcctcgctcttgtgcgaaataag
aaattaaacttgaagcatctaaaacattttgtacttgacgagtgtgataaaatgcttgaa
ctcctagacatgcgtagggatgtacaggaaatatttagaagcacaccgcacagcaagcaa
gtaatgatgttcagcgctacgttatccaaggagatacgtcctgtctgcaagaaatttatg
caagatcccatggaagtctatgtggatgatgaagctaaacttacattgcacggtctacaa
cagcattacgtgaaacttaaggagaatgaaaagaataagaagctttttgaattactagac
gttcttgaattcaatcaggttgttatctttgtaaaatctgtacaaaggtgtatggctttg
gcacaacttttaacagaacaaaactttcctgctattggaatacacagaggcatgacgcaa
gaagaacgattatccagataccaacaatttaaagacttccagaagcgaattcttgtagct
acaaatttgtttggacgtggtatggatattgaacgtgtaaacatagtatttaattacgac
atgccagaagattcagatacatatcttcatagagtagctagagctggacgttttggtaca
aagggattggccattacattagtaagtgacgaaagtgacgctaaaatactgaatgacgtt
caagaaagattcgatgtaaatattacagaattgccggacgagatagatctagcttcatat
attgaaggacggtaa
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