Megalopta genalis: 117224196
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Entry
117224196 CDS
T07400
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform X1
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
mgen
Megalopta genalis
Pathway
mgen03018
RNA degradation
mgen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mgen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117224196
09123 Folding, sorting and degradation
03018 RNA degradation
117224196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgen03019
]
117224196
03041 Spliceosome [BR:
mgen03041
]
117224196
Messenger RNA biogenesis [BR:
mgen03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117224196
mRNA degradation factors
5'-3' decay
Lsm complex
117224196
Spliceosome [BR:
mgen03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
117224196
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
117224196
NCBI-ProteinID:
XP_033332846
LinkDB
All DBs
Position
Unknown
AA seq
139 aa
AA seq
DB search
MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDSWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEVIDMVKEDVQMKSRGRGEMKGRGQNQRGRGSGRGTFGRGGRGPAPL
GRGGGNPGGNKPQNKARTK
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgttaccattatcattgttaaggacggcacaaaatcatcctatgcttgttgaattaaaa
aatggcgaaacatacaacgggcatttagttagctgtgacagctggatgaacataaatctt
agagaggttatatgcacatctagggatggtgacaaattctggagaatgcctgaatgttat
attaggggtagtacaatcaagtacttacgaatacctgatgaggttatcgatatggtaaaa
gaagatgtgcaaatgaaatcgcgtggtcgtggagaaatgaaaggaagaggacaaaatcaa
agaggacgtggaagtggaagaggtacttttggtcgtggcggaagaggccctgcacctctt
ggacgtggaggaggtaatccaggcggaaataaaccacaaaataaagcaaggactaaataa
DBGET
integrated database retrieval system