Megalopta genalis: 117224362
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Entry
117224362 CDS
T07400
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27 isoform X1
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
mgen
Megalopta genalis
Brite
KEGG Orthology (KO) [BR:
mgen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mgen03041
]
117224362
03009 Ribosome biogenesis [BR:
mgen03009
]
117224362
Enzymes [BR:
mgen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117224362
Spliceosome [BR:
mgen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117224362
Ribosome biogenesis [BR:
mgen03009
]
Eukaryotic type
Pre-60S particles
Helicases
117224362
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
PRK
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
117224362
NCBI-ProteinID:
XP_033333122
LinkDB
All DBs
Position
Unknown
AA seq
741 aa
AA seq
DB search
MDNNCDLIKTIEDDEDVPDYSENSDTEDDFQPRKQNRKKNKDFDSNFQFINDISEYNKDT
WNDLSKYIKRKVKTKLDDKIKKIRKETGNEEEDENSVEDLPKTNQEDDSDISLSEDELKK
DVFKTRERKSKKKKAIKDDEKETLNFEEYSNSEPYATFYQMNLSRPLLKAITAMNFVHPT
PIQASTIPVALMGRDICGCAATGTGKTAAYMLPTLERLLYRPLDGPAVSRVLVLVPTREL
GVQVYQVTKQLSQFTTVEVGLSVGGLDVKVQETVLRKNPDIVIATPGRLIDHLKNTPTFS
LDSIEVLILDEADRMLDEYFAEQMKYIVSQCARTRQTILFSATMTEEVKDLAAVSLDKPV
KVFVDSNQDVAFNLRQEFIRIRKEREGDREAILAALICRTFHDHAMVFVQTKKQAHRLHI
LLGLLGIKVQELHGNLTQPQRLENLRKFKNEEIDILLATDVAARGLDISGVKTVINFVMP
ATMQHYIHRVGRTARAGRVGVSVSLAGEQERSLVKDIIKNAKNPVKNRIIPPDIIEKYNK
KLQSLEPDVEKILEEERNERELAKIENQTNRAEKFLKNVNNKAEQRSWFQTQRERKEEKE
KLSLTEKEPKSKTNKKQNREPRNIVEEKKKKVPKEPKKETAEDRARNELDKIAAYQARLA
KKKSKQKKIRTVMDDDRSATNKRVGLKRPKSSFVADLTDTSKKAVKRMRYETNVKKKQSK
TKGGQKFSGGKKDSRKTFGKR
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggataataattgtgatttaattaaaactatcgaagatgatgaagacgtgccagattat
tctgaaaattctgatacagaagatgattttcagccacgaaaacaaaaccggaagaaaaat
aaagatttcgacagtaattttcaatttataaacgatatttcggagtataataaagacaca
tggaatgatctaagcaagtacattaaacggaaagtaaagacaaagctcgatgacaaaatt
aaaaagattagaaaagaaacagggaatgaagaagaggatgaaaattctgttgaagattta
cctaaaactaatcaagaagatgatagtgacatttctttgtcagaagatgaacttaagaaa
gatgtgtttaaaaccagagagagaaaaagtaaaaagaagaaggctattaaagatgatgag
aaagaaacgcttaattttgaggagtactctaactctgaaccatatgcaaccttttaccaa
atgaatttatcacgacctttattaaaggctataacagctatgaattttgtacatccaaca
cctattcaagcttccactattccagttgcattaatgggaagagatatatgtgggtgtgct
gctacaggtactggtaaaactgcagcttatatgcttccaactctagaaagattattgtat
agacctctagatggtccagctgtttctagagttcttgtattagtaccaacaagagaactt
ggagttcaggtatatcaagtcactaagcaattgtctcagtttacaacggtcgaagtaggc
ttgtctgttggtggtttagatgtaaaagtgcaagaaactgtattgagaaagaatccagat
attgtaatagctacacctggtagattaattgatcatttaaaaaatacacctactttttca
ctagacagcattgaagtactcatactggatgaagctgataggatgttagatgaatacttt
gctgaacaaatgaagtacatagtaagtcaatgtgcaagaaccagacagactattttattc
tctgctactatgacagaagaagtgaaagatttagctgctgtgtcattagacaagccagtg
aaagtatttgtagatagtaatcaggatgttgccttcaacttacgccaggaatttattcga
atacgaaaagaaagagaaggagatcgtgaagcaattttggctgctctaatttgtcgtact
ttccacgatcatgccatggtttttgtacagacaaagaaacaagcccacagattacacatt
ctattgggattattgggtataaaggttcaagaacttcatggcaatcttacacaaccgcaa
cgcttagaaaatttaagaaaattcaaaaatgaagaaattgatattttattagcaacagat
gttgctgcaagaggtttagatattagtggcgtaaaaacagtaattaattttgttatgcca
gctactatgcaacattatatacatagagttggaagaactgctagagctggtcgagttgga
gtgtcagtatcattggctggggaacaggaacgttctttagttaaagatattattaaaaac
gctaaaaatccagtaaaaaatcgaataataccgccagacattattgaaaagtacaataaa
aaattacaatcacttgagcctgatgtagagaagatattagaggaagaaagaaacgaaaga
gaattagctaaaatagaaaatcaaacaaatcgtgccgagaaatttcttaaaaatgttaat
aataaagctgaacaaagaagttggttccaaactcaaagagagaggaaagaagaaaaagaa
aaattatcattaacggaaaaagagccgaaaagcaaaaccaataaaaagcaaaatagggag
cccaggaatattgttgaagagaaaaagaagaaagtacccaaagaaccaaagaaggaaaca
gctgaagatagagcaaggaatgaattagacaagattgcagcataccaagcgagattagct
aaaaaaaaaagtaaacagaaaaagattcggacggttatggatgatgatagatctgcaact
aataagagagttggtctaaaacgaccgaaatcttcatttgttgccgacttaacggataca
agtaaaaaagctgtaaagagaatgcgttatgagacaaatgttaagaaaaagcaaagtaaa
acgaaaggtggacaaaaattcagcggaggaaaaaaggacagcagaaaaacttttggaaaa
cgttaa
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