Megalopta genalis: 117224970
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Entry
117224970 CDS
T07400
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
mgen
Megalopta genalis
Pathway
mgen03022
Basal transcription factors
mgen03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mgen00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117224970
09124 Replication and repair
03420 Nucleotide excision repair
117224970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgen03021
]
117224970
03400 DNA repair and recombination proteins [BR:
mgen03400
]
117224970
Enzymes [BR:
mgen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
117224970
Transcription machinery [BR:
mgen03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
117224970
DNA repair and recombination proteins [BR:
mgen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
117224970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
DEAD
ResIII
AAA_11
nSTAND3
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
117224970
NCBI-ProteinID:
XP_033334107
LinkDB
All DBs
Position
Unknown
AA seq
759 aa
AA seq
DB search
MKISVDGLLVYFPYDYIYPEQYAYMLELKRGLDAKGHCLLEMPSGTGKTITLLSLIVAYM
MENPLEITKLIYCSRTVPEIEKVIEELKKLMDYYEKETESKPKIVGLVLSSRKNLCIHPE
VSREREGKIVDGRCHSLTASYIRERHNYDESAPICNFYEGFDLEGKEQIVPPGIYSIDDL
KEYGKDRNWCPYFLARFTILHAQIVVYSYHYLLDPKIAETVSKELSKSSVVVFDEAHNID
NVCIDSMSVKINRRSLEKSSANIQLLEKTVAEMREDDVNKLKEEYDRLVEGLKDAQVARE
TDIILSNPVLPDEILHEVVPGNIRNAEHFVSFLKRFVEYLKTRLRVQHVIQESPAAFLRD
VQSKVSIERKPLRFCAERLATLLRTMEISDLTDFSPIILVTHLATLVATYTKGFTIIVEP
YDDKTPNVLNPILQFSCVDSSIAMKPVFDRFQSVVITSGTLSPLDMYPKILNFHPVIMSS
FTMTLARPCLLPMIVSKGNDQVAISSKYETREDVAVIRNYGQLLVEFASTVPDGLVCFFT
SYLYMESVVAAWYDQGVVDQLQRHKLLFIETQDSAETSLALINYIKACESGRGAVLLSVA
RGKVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGIMVFADKRFSRIDKRSKLPKWIQEHLTDNLCNLSTEEAVQISKRW
LRQMAQPFTRENQLGLSLLTREQLEKEEYSKIEQQAQQN
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcagcgttgacggtttactagtatattttccttacgattacatttatcccgag
caatatgcgtacatgctcgaactcaaacgtggcctggatgcaaaaggccactgtttgttg
gaaatgccttctggcactggcaaaacaatcactctgttgtcgttaattgtagcttacatg
atggaaaatccattggagattacaaaattaatttattgctcccgtaccgtaccagaaatt
gaaaaagttatagaagagttaaagaaactgatggattattatgagaaagaaactgaaagt
aaaccaaaaattgttggtttagtgcttagctctcgaaaaaatttgtgtattcatccagag
gtgagcagagaacgtgaaggtaaaattgttgacggacgttgccattctctcacagcatcg
tacatccgtgaaaggcataattatgacgaatctgcacccatctgcaatttctatgaggga
ttcgacttggaaggcaaagaacaaatcgtgccacctggaatatattcaattgatgatttg
aaagaatatggaaaggaccgtaattggtgcccatactttcttgcaagatttacaatttta
cacgctcaaatcgtagtatacagttatcattacttattagatcccaaaattgctgaaact
gtatcaaaagaattaagcaaatcttctgttgtggttttcgatgaagcccacaatatagac
aatgtatgcattgattcaatgagtgtaaagataaatagaagatcattggagaaaagttct
gccaatatacagctgcttgaaaagacagtagcagagatgagagaagacgatgtaaacaaa
ttgaaagaagaatatgatagattagtggaagggctgaaagatgcacaagttgctagggaa
actgatattattttatctaatcctgttttaccagacgaaattttacatgaggtggttcct
ggtaacatacggaacgcagaacattttgttagtttcctaaaacgttttgtggaataccta
aaaacacgtttacgtgtgcaacacgtgatacaagaatcacctgctgcattcttaagagat
gtacaatcgaaagtttcaatagaacgtaaaccattaagattttgcgccgaacgattggcg
actctactacgcactatggagataagtgatttaactgatttttcaccaattatcctggtg
actcaccttgcaactttagttgcaacatacacaaaaggatttactattattgtagaaccg
tatgacgataaaacacctaatgttttaaatccaatccttcagttcagttgtgtagattca
tccattgcaatgaagcctgtcttcgatagatttcaatctgtagtaatcacatcaggaaca
ttgtcgcctttagacatgtatcctaaaatattgaattttcatccagtcataatgtcatct
tttacaatgacattggctagaccatgtcttctacctatgatcgtatcgaaaggtaatgat
caagtagcaatttcgtccaaatatgaaacaagagaagatgttgctgttataagaaactat
ggtcaattattagttgaatttgcatccactgttcctgatggtttagtttgcttttttacc
tcgtatttatacatggaatctgtggtggctgcgtggtatgaccaaggtgttgtagatcaa
ctccagagacataagttactatttattgaaactcaggattccgccgaaacgagtctagca
cttattaattatataaaagcttgtgaaagtggaagaggggctgttctgctttcggtagcg
cgtggcaaagtatcggaaggagtagattttgatcatcatttaggaagggctgttcttatg
tttggaattccttatgtatatacacaatcgcgtattttaaaagcgcgtctcgaatatctt
cgtgatcaattccaaatcagagaaaacgattttttaacttttgatgccatgagacatgca
gcacaatgtgtcgggcgtgcaatcagaggaaaaactgattacggtataatggtgtttgcg
gacaagagattttcaagaatagacaaacgaagtaaattaccaaaatggatacaggaacat
ttaactgataatttgtgtaacttgtcgactgaagaagctgtacagataagcaaacgatgg
ttacgacaaatggcgcaaccgttcacacgtgagaaccaattaggattatcgttgttaacg
cgagaacaacttgaaaaagaggaatatagtaagatcgaacagcaggcgcaacaaaattag
DBGET
integrated database retrieval system
