Megalopta genalis: 117225785
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Entry
117225785 CDS
T07400
Name
(RefSeq) protein suppressor of forked isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
mgen
Megalopta genalis
Pathway
mgen03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mgen00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117225785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgen03019
]
117225785
Messenger RNA biogenesis [BR:
mgen03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
117225785
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
NRDE-2
Motif
Other DBs
NCBI-GeneID:
117225785
NCBI-ProteinID:
XP_033335444
LinkDB
All DBs
Position
Unknown
AA seq
720 aa
AA seq
DB search
MSEDKTEFDWGNEKLQRAQKTVDESPYDLEAWSILIREAQNRPITEVRPVFEKLVTVFPS
AGRYWKIYIEQEMKMRNFEKVEKLFQRCLMKILNIELWKLYLSYVKETKASLATYKEKMA
QAYDFALDKIGMDIHSYSIWNDYVMFLKSVEAVGSYAENQKISAVRKVYQRGVVNPMINM
EQLWKDYMAFEQNINPIIAEKMAIERSRDYMNARRVAKELEAVTRGLNRSAPSVPPTGHP
EEVKQVELWKKYIAWERSNPLRTEDTSLVARRVMFAIEQCLLCLGHHPAVWHQAAHFLEL
SSKILTEKGDVNAAKNLSDEAATMFERATSTLLSKNMLLYFAHADFEEGRVKYEKVHQIY
QKFLDIPDIDPTLAYVQYMKFARRAEGIKSARTVFKRAREDPRCKHHVYVAAALMEYYCT
KDKNIAFRIFELGLKKFGDNPDYILCYIDYLSHLNEDNNTRVLFERVLSSGSLEPEKSVD
IWNRFLEFESNIGDLASIVKVEKRRSAVLEKIKEFEGKETAQLVDRYKFLDLYPCTPMEL
RSIGYMEVSSVTRNTAGVLPRIPDPEEAIASLPRPDLSQMIPYKPKVNPLPGEHPVPGGS
FPLPPAAAQLCTMLPPPGCFRGPFVAVDLLMDVFNRIQLPDHDGSVLFPAPLPIADNGCD
TKLFDLAKSVHWIVDESNDGVSIGSKRRRTRLGGDDSEEEDLPPPPANDIYRQRQQKRVK
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagacaaaacagaatttgattggggaaacgaaaaattacaacgtgctcaaaag
acagtggatgaatcgccttacgatctggaagcatggagcatcctgattcgggaagcacaa
aacagacctatcacggaagtgaggccagtgttcgagaagcttgtcacagtatttccttct
gccggtcgttactggaaaatttatatagaacaagagatgaaaatgcgcaactttgagaag
gtggaaaagcttttccaaaggtgcctcatgaaaatcttaaatattgagttgtggaaactt
tacctttcttatgtcaaagaaacgaaagccagcctggcgacgtacaaggagaaaatggcg
caagcgtatgacttcgcgttggacaaaatcggtatggacattcattcctacagtatttgg
aacgactacgtgatgttcttgaaaagcgtggaggcggttggctcgtatgcggagaatcaa
aagattagcgcagtccgtaaggtgtaccaacgtggtgtcgttaaccctatgattaacatg
gaacaattgtggaaggactacatggcgtttgagcaaaacataaacccgataattgcggag
aaaatggcaatcgagcgatccagggattacatgaacgcgcgacgggtcgccaaggaattg
gaggctgtaaccagaggactgaaccgaagtgcgcctagcgtgcctccaaccgggcatccg
gaagaagtgaaacaggtcgagctgtggaagaaatatattgcgtgggagcgcagcaatcct
ttgagaacggaggacacttcgttggtcgcccggagagtgatgttcgccattgaacaatgc
ctgctgtgcctgggccatcatccggcagtctggcatcaggctgcgcactttttagaatta
agttcgaaaatattaaccgagaaaggcgatgtaaacgcagcgaaaaatttaagcgacgag
gccgccacgatgttcgaaagggcgaccagcacgttgctttcgaagaacatgttgttgtat
ttcgcacatgcagacttcgaggagggaagagttaaatacgagaaagtccatcaaatatat
caaaagttcctcgacatacccgatatcgatcccacattagcgtatgtacagtacatgaaa
ttcgcgagacgcgcggagggtataaaatcggctagaacggtattcaagagagccagagag
gatccaagatgcaaacatcacgtgtacgtggccgctgcgctgatggaatattattgcact
aaagataagaacatagcgtttcggatattcgaactgggtttgaagaagtttggagacaat
ccggactacatactttgttacatcgactatttgtcgcatttaaatgaggataataacacc
agagttctgttcgagagggttttatcttccggtagtttagaaccagagaaatcagttgac
atatggaaccgtttcttagagttcgagtcgaacatcggtgacttagctagtatcgttaaa
gttgagaagagacgcagtgcggtcttagaaaagattaaagaattcgagggcaaggaaacc
gctcaattggtagacagatacaaattcttggacttgtatccctgcactccgatggagttg
aggtccataggctacatggaggtatccagcgtgaccaggaacaccgcaggcgtgttaccg
cgaatcccggacccagaggaagccatagcctccctgcccagaccggatctgtcgcagatg
atcccgtacaaaccaaaagtgaatccgctgccgggcgaacatccggttcccggtggttct
ttcccgttgccgccagctgcggcgcagctttgtaccatgctcccgccacctggttgtttc
aggggaccattcgtagcggtggacctgctgatggacgtgttcaacaggatccaattaccg
gaccatgacggttccgttctttttccagccccgttaccgatcgcggataacggctgtgac
accaagctgttcgacctcgcgaaatccgtgcactggatcgtcgacgagagcaacgacggc
gtcagcatcggatcgaagcgcaggaggacgcgtctgggtggcgacgacagcgaggaggag
gacctgccgccgccgcccgcgaacgacatataccgccaaagacaacaaaaacgagtgaaa
tga
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