Megalopta genalis: 117225946
Help
Entry
117225946 CDS
T07400
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
mgen
Megalopta genalis
Pathway
mgen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mgen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117225946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mgen03041
]
117225946
03009 Ribosome biogenesis [BR:
mgen03009
]
117225946
Enzymes [BR:
mgen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117225946
Spliceosome [BR:
mgen03041
]
Complex A
U1 snRNP components
U1 related factors
117225946
Complex B
117225946
Ribosome biogenesis [BR:
mgen03009
]
Eukaryotic type
Pre-60S particles
Helicases
117225946
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
117225946
NCBI-ProteinID:
XP_033335700
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MFNRDREQGRGRRGISGRGNSRGGGDNIRGNNMNRFGGRGRGINNSIRGGIKGKQPGGAL
RKITWDIRSLEPLRKDFYVEHPSVRNRSKEEVSKFRENAEITVKGDDVPNPIQYFEEGNF
PPYVLEVIHKQGYSQPTPIQAQGWPIALSGKDLVAIAQTGSGKTLGYILPAIVHIIHQPR
LSAGDGPIALILAPTRELAQQIQEVANSFGESAGVRNTCIFGGAPKGPQAHDLERGVEIC
IATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIKKIIEQIRPDRQVLMWSAT
WPKEVRALAEDFLTDYTHLNIGSLTLSANHNIIQIIDVCQEFEKDLKLYRLLQEIGNEKE
NKTIIFVETKRKVDDITRNIRRDGWQALSIHGDKNQQERDHVLQEFKSGRAPILVATDVA
ARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTSHNMKHAGDLIEVLK
EAGQNINPRLTEMAELAKSGNYGSRSGKRFMGSDRNNSRRGNSDNRGRGGPSRGRGGSNA
RGGNTYQSVSSSYSGSDYGSYNNMKQSNSVNQNSGYGYSTQRSYGQNNLAPSYGGGDNYG
STYQYRGVTY
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatcgagacagagaacaaggtagaggacgtcgtggtatcagtggccgtggaaat
agtagaggaggtggtgataacattcgtggaaataacatgaatagatttggtggacgtggt
agaggaattaataatagtattcgtggtggaataaaaggcaaacagcctggaggagcactt
agaaaaatcacttgggacataaggtctttagaacccttgcgtaaagatttctatgttgaa
catccttcagttagaaatagatccaaagaagaagtaagtaaatttcgtgaaaatgctgaa
ataactgtgaaaggtgatgatgttcctaatcccattcagtattttgaagaaggaaatttt
ccaccttatgtattagaagtaatacataaacagggttactctcagcctacgccaattcaa
gcacaaggatggcctattgcacttagtggaaaagatctagttgctattgctcaaactggt
tctggaaaaactcttggatatatattaccagcaattgtgcacattatacatcaaccacga
cttagtgctggtgatggtccaattgctttgatcttagcccctacaagagaattagcacaa
caaattcaggaagtagctaattcttttggtgagtcagcaggtgtaagaaacacttgtatc
tttggtggtgcacctaagggaccgcaggctcatgacttagaacggggtgttgaaatatgc
attgctacaccaggcagactcattgattttttggaaagaggaacaacaaatttacgcaga
tgtacatacttagtactagatgaagctgatagaatgttggatatgggttttgaaccacaa
attaaaaaaataattgaacaaatacgacctgatagacaagttttaatgtggtcagccaca
tggcccaaagaggttcgggctttagcagaagactttttgactgattacacacatcttaat
attggttctttgaccttgtctgccaatcataacattattcaaataattgatgtttgtcaa
gagtttgaaaaagacttgaaactgtatagattgcttcaagaaattggaaatgaaaaggaa
aacaagacaatcatttttgttgaaacaaaacgaaaagtagatgatattacaaggaatatc
agacgggatggatggcaagctttaagtatccatggtgataaaaatcaacaagaaagggat
catgtattacaagaatttaaaagtggaagagctcccattttagttgcaacagatgtagct
gctagaggtttagatgtggatgatgtcaaatatgtaataaattttgattatccatcatcg
tcagaagattacatacacagaattggtcgtactggtcgaagaaggcagactggaactgct
tatgcattcttcacaagccataatatgaaacatgctggagatttaatagaagtactaaag
gaagcaggacaaaacataaatcctcgactcactgaaatggcagaattggcaaaatcggga
aattatggaagcagaagtggtaaacgatttatgggaagtgatagaaataatagtagaaga
ggaaatagtgataacagaggaagaggaggtccttcaagaggaagaggtggtagtaacgct
cgtggcggaaatacttatcaatctgtttcaagcagttattctggttcagactatggcagc
tataataatatgaagcaaagtaattcagttaatcagaactcaggatatggatacagtaca
caaagatcatatgggcaaaataatttagcaccgagttatggaggtggagacaattatgga
agtacttatcagtatagaggcgtaacatattaa
DBGET
integrated database retrieval system
