Megalopta genalis: 117226536
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Entry
117226536 CDS
T07400
Name
(RefSeq) ATP-dependent RNA helicase Ddx1 isoform X1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
mgen
Megalopta genalis
Brite
KEGG Orthology (KO) [BR:
mgen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mgen03041
]
117226536
03016 Transfer RNA biogenesis [BR:
mgen03016
]
117226536
Enzymes [BR:
mgen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117226536
Spliceosome [BR:
mgen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117226536
Transfer RNA biogenesis [BR:
mgen03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
117226536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
117226536
NCBI-ProteinID:
XP_033336883
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
MEWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPVLQIVWETLKDFESGKATAS
STSHSQPSKHWSLSLFDRGTALAVTPDGLRCQSREQKEWHGCRANKGVQGNKKFFFEATV
TDEGLCRVGWSTSQATLDLGTDKNGFGFGGTGKKSNAKQFSDYGEAFGMHDVIGCYLDLL
KGEISYAKNGVNLGTAFILNAQQKSQTFYPAVVLKNAEMSFNFGAQPFKHPPPGDYIALA
SAVKEFIKENPMNNSSARSKDDGKPKCNAPQAIIIEPSRELAEQTFNQIQKFKKHLKDPI
IKELLVIGGVSVKEQISVLNSGVDIVVGTPGRLEDLIQGGYLSLTHCRFFILDEADGLLK
QGYTSLIDRLHKQMPKITSDGKRLQMIVCSATLHSFDVKNMAGRLMHFPTWVDLKGEDAV
PETVHHVVVIVDPQKDTFWHNLRQHIPTDGVHARDNIRPGGNTPETLSEAVKIMKGEYCI
RAIKEHNMDRAIIFCRTKIDCDNLERYLKQTGGNQFSCVCLHGDRKPPERKANLEKFKKQ
EVKFLICTDVAARGLDITGLPFMINMTLPDEKSNYVHRIGRVGRAERMGLAISLVSKVPE
KVWYHGEWCPTRGRNCQNTSLTDQSGCCVWYNEQTYLADIEDHLNVTIQQIDTDIKVPLN
AFDGKVMYGQKRVNMGTNYQNHVQQMAPYVSQLSSLESKSQLLYLKRHMAAAAN
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggaatggacattgccaacagacgtgcaagccgaagcgatacctttgattctgggtggt
ggcgacgtgttaatggctgcagaaactggtagtggaaagactggtgccttttgtttacct
gttttacaaatagtatgggaaactctgaaagactttgaatctgggaaagcaactgcttcg
tcgacatcacactcgcaaccttcaaaacattggtctctaagtttattcgatagaggcaca
gcattggctgtaactccagatggtctaagatgtcaaagccgagaacaaaaggaatggcat
ggttgtcgggccaataaaggagttcaggggaataagaagttcttttttgaagctacggta
accgacgaaggtttgtgccgtgttggctggtctacgtctcaggctaccttggatttaggt
acagacaagaatggctttggtttcggtgggactggtaagaaatccaatgcaaaacagttt
agtgattatggcgaggcttttggcatgcacgatgtgattggatgttacctagatttatta
aagggtgaaatcagttacgcaaagaacggcgtaaatctaggtacagcgttcattttaaac
gcgcaacaaaagtcccagacattttacccagccgttgtattaaagaacgcggaaatgtcg
tttaattttggagcacagccattcaaacatccacctcctggtgattacatagctcttgct
tctgcggtcaaagaatttataaaagaaaacccaatgaacaacagcagtgctagaagcaag
gatgatggtaaaccaaagtgtaatgctcctcaagccataatcatagagccgtctagagaa
cttgctgaacaaacctttaatcaaattcaaaaattcaagaaacatctgaaagatcctata
atcaaggaattattagttattggtggagtcagcgtgaaagagcagatatctgtattgaat
tctggcgtggatatagtagttggaacaccagggcgtctagaagatttgatacaaggcggc
tacttgtcgctcactcattgcaggtttttcattctggatgaagccgatggtttgctgaag
cagggttacaccagcctaatcgatcgtctacacaagcaaatgcctaaaattacatccgat
gggaaacgactgcagatgatagtgtgttcagccacgttgcattcgttcgatgtaaaaaat
atggctggaagattgatgcatttcccgacttgggtggatttgaagggcgaggatgcggta
cctgagacggtgcatcacgttgtggtaatagtggacccacaaaaagacacgttctggcac
aatttgagacaacacataccaactgatggtgttcacgctagagacaacataagacctggt
ggcaacactccagagacattatcggaggctgtgaagataatgaagggagagtattgcatt
cgtgccatcaaagaacacaatatggacagagccataattttctgtagaaccaagatagac
tgcgataacctggaacgatacttgaagcagactggtgggaaccaattctcctgcgtgtgt
cttcatggcgataggaaacctccggaacgtaaagccaatctggagaagttcaagaaacag
gaggtgaagttcctaatttgcaccgacgtcgcagccagaggactggatataacgggctta
cctttcatgatcaacatgaccttacccgatgagaaatcgaattacgtgcaccgtatagga
agggttggaagggccgaaagaatgggtctggctatttctctggtcagcaaagttcctgag
aaagtatggtaccatggcgagtggtgtcctactcgaggaagaaattgtcaaaacacatct
ctcactgatcagagcggttgttgcgtctggtacaatgaacagacttatttagctgatatc
gaggaccatctgaatgtcacgatccagcagatcgatactgacataaaggttcccctaaat
gctttcgacgggaaggtcatgtatggtcaaaagagagtcaacatgggaacaaattaccag
aatcacgttcagcaaatggctccatacgtgtcgcaattgtcatcattggaatcgaaatcg
caactgctgtacttgaagagacacatggctgctgcagcgaactaa
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