Megalopta genalis: 117226577
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Entry
117226577 CDS
T07400
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
mgen
Megalopta genalis
Pathway
mgen03013
Nucleocytoplasmic transport
mgen03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mgen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117226577
03015 mRNA surveillance pathway
117226577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgen03019
]
117226577
Messenger RNA biogenesis [BR:
mgen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117226577
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
117226577
NCBI-ProteinID:
XP_033336944
LinkDB
All DBs
Position
Unknown
AA seq
808 aa
AA seq
DB search
MSDTRRRRKSNQSCGSDDLSDSCEELNATKETQSSEQTDGHQDSECDIYASDSDVESQDG
ALRESGDGQEEEKPQKKLDDDEDRRNPQYIPKRGTFYEHDDRTADEVTETNQESQNERET
KEKKVWKDKEDRWDHDRYNDEEQAPKSHEELIAVYGYDIRNEEGPPRARRRRRYGRGPNK
YTRNWEDEDAYGKPGTNVTNRNRKFNRSGEDFPALGTNKNASALVEEPVISSAWYSSKNK
IQNKVQNFPPLQTQSDSPKTKSSSASNTHTNENKAPNEPTNPAWKKDIKHSSHTQSNNGN
SGAGGDADKLVNAKTSPRDNNKRNVQESVSLAASRTRGRGFRTNANNNMVTNRTIETKPK
GRGAGPITAENKRNSNVQNDDEQQITHDMKHVSVNDGTQYHQSGRHNKSFYGQSSNQQRS
STVPPRMQQQQQSHSSSQPQQQSLQQQDSSANRPKRYSSLRQRPTVSETSGQQNYPSQHG
QHGQHSQHSQHNQHSQHNQHNQHNQHGYFPPQAGNSRGVLESQGYPQGHFEQTTPVAAAA
TPLAGQPVIPLPPNGQPASYAPPPFLVPPPQFIPPQTAPPSIINYVPGPNGPAFQPNFQG
YQGYSPPVQPQRPPPPQELFQPQGCTYYSPAQQQQQQQQSAPMRRPKAAIPILPPPDNQQ
HQSGKGRGRSTQLQQPNQPGNMQQAEQEIKSGLMEGEHQGIPEQFENVQNEQSSLIQETQ
KSIDPSAIPDTMTEEIDAKDVDIDTPVVQELITTDPTAEVINANNSSKIILDENIVPIKT
TVVEKIENDPIVIESSTTESKVIEEAAA
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatactagacgacgtcgaaagtctaatcagtcgtgcggttccgacgacctctcg
gattcctgtgaagagttgaacgcaacgaaagagactcagagcagtgaacaaaccgatgga
catcaagactccgaatgcgacatttatgcatcagactctgatgttgaatctcaagatgga
gcattgagggagagcggagatggtcaggaagaagaaaaacctcagaagaaattagatgat
gatgaggacagaagaaatccacagtatattcccaagagagggacattttatgaacacgat
gacagaactgctgatgaagtgacagaaaccaaccaagagtctcagaatgaaagggaaacc
aaagagaaaaaagtatggaaagataaggaagatagatgggatcatgataggtacaatgat
gaagagcaggcaccaaagagccatgaagaactaatagcagtgtatggctatgacattaga
aacgaagaaggacctcctagggctagaagaagaagaagatatggtcgtggccccaataaa
tatacccgtaactgggaagatgaggatgcatatggaaaaccaggaacaaatgtcaccaat
aggaatagaaagtttaacagaagcggtgaagattttcctgcactaggaactaataaaaat
gcttctgcccttgtcgaggaaccagtaatttcgtcggcttggtatagtagtaaaaacaaa
atacagaacaaagtacagaactttccaccactgcaaacacagagcgacagtccaaaaacg
aaatcaagcagtgcatctaatactcatacgaatgaaaataaagctcctaatgagcctaca
aatccagcctggaaaaaggacatcaagcactcttcacatactcagagtaataacggaaat
agtggagccggtggtgacgcggacaaattggtgaatgcaaagacatctccaagagataat
aacaagaggaacgtccaagagtctgtaagcttggcagcgagtagaacacgcggacgagga
ttcaggacgaacgctaataacaatatggttactaatagaacaattgaaactaaaccaaag
ggacgcggggcgggtccgatcaccgcggagaataagagaaatagtaacgtacagaatgac
gatgagcaacagatcacgcatgacatgaagcatgttagtgttaatgatggtacacagtac
catcaaagtgggagacacaacaaaagcttctatgggcagtcgtccaatcaacagaggtcg
agcacggtacctccaagaatgcaacaacaacagcaatctcattcctcatcgcaaccgcag
caacaatcgcttcaacagcaagatagttctgccaatagaccgaagcgatactccagttta
cgacaacgtcctacagtttctgagacttctggacaacaaaattatccatcacagcatggg
cagcacggtcaacacagtcaacacagccaacataatcaacacagccaacacaatcaacat
aatcagcataaccagcatggatatttcccccctcaagctggcaattcaagaggtgtttta
gagtcgcaaggatatccgcaaggtcatttcgaacaaactacgcctgttgctgccgctgct
acgcctctggctggacaacctgttattcctttgccaccaaatggtcaaccggctagttat
gctccaccgccatttttggtaccgccaccgcaatttatacctccacagactgctccacct
agtataatcaattatgttcctggtccgaatggtccagcatttcaaccaaactttcaaggc
taccaaggatacagtccgccagttcagccgcagcgtccgccacctccgcaagagcttttc
cagccacaaggttgtacttactatagtccagcgcagcagcagcaacagcaacaacagtcg
gctccgatgagacgaccgaaagctgcgattccgattcttccaccgcctgataatcaacaa
caccagagcggcaaaggacgaggtagaagtacacagctccagcaaccgaatcagcctggc
aatatgcaacaggctgagcaagaaattaaaagcggcttgatggaaggtgaacatcagggc
attccggaacagtttgagaacgttcaaaatgaacagagctctctgattcaagaaacacag
aaaagcatagatccaagtgcaataccagacactatgaccgaagagatagatgctaaagac
gttgatatagatacaccagtggttcaagaactcattacgacagatcctaccgccgaggta
ataaatgctaacaattcgtcaaaaattattctagatgaaaatattgttcccattaaaaca
acagtcgtggaaaaaatcgagaatgatcctatcgtcattgagagtagtacaactgagagc
aaagttatcgaggaagcagcagcttga
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