Megalopta genalis: 117226751 Help Entry 117226751         CDS       T07400                                  Name (RefSeq) 5'-3' exoribonuclease 1   KO K12618   5'-3' exoribonuclease 1 [EC:3.1.13.-] Organism mgen  Megalopta genalis Pathway mgen03008   Ribosome biogenesis in eukaryotes mgen03018   RNA degradation Brite KEGG Orthology (KO) [BR:mgen00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     117226751   09123 Folding, sorting and degradation    03018 RNA degradation     117226751  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:mgen03019]     117226751    03009 Ribosome biogenesis [BR:mgen03009]     117226751    03016 Transfer RNA biogenesis [BR:mgen03016]     117226751    03036 Chromosome and associated proteins [BR:mgen03036]     117226751 Messenger RNA biogenesis [BR:mgen03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      117226751   mRNA degradation factors    5'-3' decay     5' exonucleases      117226751 Ribosome biogenesis [BR:mgen03009]  Eukaryotic type   Pre-60S particles    RNases     117226751 Transfer RNA biogenesis [BR:mgen03016]  Eukaryotic type   tRNA degradation factors    Rapid tRNA decay (RTD) pathway factors     117226751 Chromosome and associated proteins [BR:mgen03036]  Eukaryotic type   Gene silencing    piRNA pathway     117226751 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  XRN_N XRN_M XRN1_D2_D3 XRN1_D1 SH3_12 Dicer_dimer Motif Other DBs NCBI-GeneID:  117226751 NCBI-ProteinID:  XP_033337296 LinkDB All DBs Position Unknown AA seq 1675 aa AA seqDB search MGVPKFFRYISERYPCISQTLKDYQLPMFDNLYLDVNGIIHGCSHPNDSDISFHISEETI LKNIFHYIEILFRMIQPQKLFFISIDGVAPRAKINQQRGRRFRVAKLTEGQIATAKTKGI EINMDEKFDSNCITPGTEFMAKLDEQLKYFISNKISTDDLWQKCKIIFSGSQVPGEGEHK IMDYIRYMKAQPGYDPNTKHCLYGLDADLIMLGLCTHEAYFTLLREEVKFGKKQTKIQTP EETKFCLFHLSLLREYINHEFSSLREKLPFPYDIEKIIDDWVLMGFLVGNDFVPHLPNLH LSHGALSILYQVYMDVLPSLEGYINETGTLKLDRFEKFIERLSRFDLLQFSTHYADLKYL EGKMERRFPNSDIPMCKKPEDSNNIPTPKRVQDKEFDNLLRAAADTTLGALFDDEEDDES DSEIYNLEFIQHKRDYYMNKLEYENIDEDFLRSQAEAYVRAIQWNLNYYYNGCCSWSWFY PHHYAPYISDIKDFKDLKLEFDLGEPFLPFQQLLAVLPPYSRKLLPSAFQRLLIDETSPI IEYYPVDFKTDLNGKQQEWEAVVLLPFINEKLLLDAMAPHYSELTPDQLARNKHGPMCLY FHTEEDRGVYKAPEYFPDTLHNHAAVKLINSEDIIIPREKLIRGLHPEVKLEIYCPGFPT LQHIEHTVNLEKAKVKVFEHHSYRDSMIIYIKSPSETEFKSVTSELLGKIVYVEWPFLTE AQVIAVSISSSKLSLVDPQTGYSPENVKEEELKAAHHTLWNSQAKQITDVHKSRLGIDVG EIKILVHARLMMGSKYIFNRHGKLHFEKQWSDTLTAYAYQTVVQDLSVHNFNVTLYRTVE DIFMPGTVCFLIGHPHYGAMGTVIEPAVSKKLGKVNVSVNVSSEPSLEAMKQTHQKLRTK YMQGNSIAQRLGISSHLLSRITGTIYVKPTSNNFSQEVIKHNIGLNLKFNRKNEEIVGYT RKENGHWLYSPKVVKLTRNYIKKYPDLFERLSQTLGNVILEKELFEEGSGELNEIMKWLK EELQGLKSCPCGTENVEACLVKEIEETVDKFLKDQPIEKSVVMKVKPHLLFKPGLHLRKM QPDSNTQTYLLDRVCCIKDNFTVPLGFKGTVIGIQRSENPLETMYDVVFDKTFTCGLIIN GCSDLRGYRLSALDFINISHGERIWCSKIKLSVTEVNAESMVSWKFASNKAADSRANSSA FASYKKRHQLSGQQPEAWSNSRTVQKNNETANQEIRLTSTSSSFSSNQFKWKQRDSRNDV VARTAEGNKMIKSTQQNPAPPENAQNKQSTVKPPTLEFQALWNELHKLQLNKTKPSEPVK TVIQEPMDSKMKQMNNSFSESTPQDPSAFLKAVLKISDENTQQTTQSTSPKILSNNTSVP QKENKMLDTLPLVQQLFDHARQSKNVKDEKTPIWYCTQLLHYYQLTGTGMPIYSYFTDGE TNLIRARIVLPDKRAFVSDPCGTHEQAAGSAARKVYTELNLSNAMPNMKIVPPLHWYATR QNNSWSPNVRPPGPPFFPPKAQPPQHLPQWTSKAQHSTNYHQPYTQNNQYMHHAQPKLAQ NEPKSEIKNNTSFVPLQAQKNSRNIVAKQAGAAKETNQSAKDNLQPLVQQKKKELPAKKA ALITAVTEKQKSTQSCSNQQVQNTQTAAKPKKSRIAAKFGIPSQTEESNRRKDSV NT seq 5028 nt NT seq  +upstreamnt  +downstreamnt atgggtgtaccgaagttttttagatatataagcgagagatatccttgtatcagtcaaacg ttaaaggactaccagctaccgatgtttgataatttatatttagatgtgaatggtatcata catggatgttctcatcccaatgactctgatatctcgtttcatatcagcgaagagactata ttgaaaaatatatttcattatattgaaatattattccgtatgatacagcctcaaaagttg tttttcatatcaatcgatggtgtggcaccacgagcaaaaattaatcaacagaggggtagg cgtttcagagttgcgaaacttacagagggacaaatagctacggcaaagaccaagggtatc gaaataaacatggacgagaaattcgattcaaattgtattactccaggaacagaatttatg gcaaagttagacgaacagttgaaatattttatttcaaataaaatttcaaccgacgatctt tggcagaagtgcaaaattatatttagtggatctcaggtcccaggggaaggggaacataaa ataatggactatatacgttatatgaaggctcagccaggttacgatccaaatactaaacat tgtttatatggtctagatgcagatttaataatgttgggtttatgcactcacgaagcatac ttcacattactaagggaggaagtaaagtttggtaaaaaacaaacgaaaatccaaactcca gaggagacaaagttttgtctctttcatttatctctattaagagagtatatcaaccacgag ttctcttcgttgagggaaaaactgccatttccatatgatattgaaaagattatcgatgac tgggttttaatggggtttttagtagggaatgactttgttcctcatttgccaaacttacac ctctcgcatggagcattatccatattgtatcaggtgtatatggacgtgttgccaagttta gaaggatatataaacgaaacaggaacgttaaaactagacagattcgaaaaatttatcgaa agactcagtcgtttcgaccttttacaattttcgacgcattacgctgatctaaagtatctt gaaggtaaaatggaaagacgtttcccaaattccgacatacctatgtgtaaaaagccagaa gacagcaacaatatacctaccccgaaaagagtacaagacaaagaattcgacaatttgctt agagctgccgccgatacgacgctgggagcattgtttgacgatgaagaagacgatgaatct gatagtgaaatttataatctggaatttatccaacataaaagggactattacatgaacaaa ttagaatatgaaaatatagatgaggatttcctacggtctcaagctgaagcctatgtcaga gctatacaatggaatttaaattattattacaatggatgttgtagttggtcgtggttttat ccacatcactatgcgccttacatttcagacataaaggatttcaaggatttaaaattagag tttgatttaggggaaccatttttaccgttccaacagttattagctgtactgccaccgtac agtagaaagttattaccatcagcatttcaaaggttgctaatcgacgaaacatcccctata attgagtattacccggtagacttcaaaacggatttaaatggcaaacagcaagaatgggag gctgttgtgcttctcccgttcataaacgaaaagcttcttctggatgccatggcgccacac tactcggaattaactcctgaccagcttgcgagaaacaaacatggaccaatgtgtttgtat tttcacacagaggaagataggggcgtttacaaggcgccagaatattttcccgacactctg cacaatcatgcagctgtaaaattaattaactccgaggatattattattccacgagaaaaa ttaatcagaggactacatccagaagtaaaattagagatatattgccccggctttccaaca ctgcagcatatagaacataccgtcaatttggagaaggccaaggttaaagtgtttgagcat cattcgtatagggatagcatgattatatatataaaatcgccgtcggaaacggaattcaaa tcagtgacgtctgaactgttgggaaaaattgtttatgtggaatggccttttttgacagaa gcgcaagtgatagctgtttcaataagcagctcaaaattaagtttagttgatcctcaaact ggttattctcctgagaatgtaaaggaagaggaattgaaggctgcgcatcatacgctatgg aactctcaggcgaaacagatcactgacgtacacaaaagtcgtctgggtatagatgtaggc gaaataaaaatattagtccatgcacgtttaatgatgggaagcaaatacatatttaaccgt catgggaaattacatttcgagaaacagtggtcggacacgctaactgcttatgcctatcaa acagtagtacaagatctatctgtacacaacttcaacgtaacattgtatagaaccgtcgag gatatttttatgccaggaactgtgtgcttcttgataggacatcctcactatggtgcaatg ggcacagtaattgaaccggcagtttcgaaaaaattaggtaaagtcaatgtatcggtaaac gtcagttcagaaccgtcattggaggcgatgaaacagactcatcagaaacttcgaactaag tatatgcaaggaaactcaattgcccagagattaggtataagcagtcatttgctgagcaga atcacaggaacgatttacgtaaagccaacgtctaataacttcagtcaagaggtgattaaa cacaatattggcctgaatttgaaattcaataggaaaaacgaggaaatagttggttatact agaaaagagaatggtcattggctgtacagtcctaaagtcgtcaaattgacccgtaattac ataaagaagtatcctgatctgttcgaacgactttcacagactcttggaaatgtaatccta gagaaagaattattcgaggagggatctggagaattgaatgaaatcatgaagtggctgaaa gaagagctgcaaggcttaaaaagctgtccttgcggaacagagaacgtcgaagcttgcttg gtaaaagaaattgaggagactgtcgacaaatttctgaaagatcaacctatcgagaagtcc gtggtgatgaaagtgaagcctcatttgctgttcaagcccggtttgcatttacgcaagatg caacccgattcaaatacacaaacctatctgttggatagggtgtgttgtatcaaagacaat ttcactgttcccttaggtttcaagggtactgtaataggtattcagagatcggagaacccg ttggagactatgtacgatgttgttttcgataaaacctttacatgcggactgattataaac ggctgctcggatcttcgcgggtaccgattatctgcgcttgatttcataaacatcagtcat ggagagagaatatggtgtagcaagataaagttatctgtgacagaggtaaacgcagaatcc atggtctcctggaaatttgcgtccaataaggcggctgattcgcgcgcaaactcgagcgct ttcgcgtcttacaagaagcgtcatcaattgtcaggccaacagccagaggcttggtcgaac tcgcggacagtacagaagaacaatgagacagccaaccaagagattcgtttaacatcgacg tcgtcgtcgttctcatcgaatcagttcaaatggaaacaacgtgattctcggaacgacgtc gttgcgaggaccgcagaaggtaataagatgatcaagagtactcagcaaaaccctgcgccc cctgagaacgcacaaaacaagcaatcgacagtgaaacctccgacgttggagttccaagca ttgtggaacgagttgcacaagttgcaactgaataaaacgaaaccatcagagccagtaaag actgtgatacaagaaccgatggattcaaagatgaagcaaatgaataatagcttttctgaa agtactcctcaagatcccagcgccttcctgaaggctgttttgaaaatttctgatgaaaat acacaacagactacacaatccacatcaccgaagattctttccaataacacctcagttcct caaaaggaaaataagatgttggatacattgcctttggtgcagcagttgtttgatcatgcg cgacaaagcaaaaatgtaaaggacgagaaaacaccgatttggtactgcacacaattattg cattattatcaactcactgggactggaatgcctatttacagctactttaccgatggtgaa actaatctaattcgagcacgcattgttctcccagataagagagcttttgtcagtgatcca tgtggaacccatgagcaagctgcaggaagcgcagcaaggaaagtgtacacggaactaaat ttgtctaacgcaatgccaaatatgaagattgtgccgccactgcattggtacgctactcga caaaacaactcttggtccccgaacgtaagaccaccaggaccgccatttttcccgccgaaa gctcaacctcctcaacaccttcctcagtggacctcgaaggcgcagcatagtactaattat caccaaccgtacacacaaaataatcagtacatgcatcacgctcaaccaaaattagctcaa aacgaaccgaagtctgagataaagaacaatacatcttttgttccactgcaagcgcaaaag aacagcagaaacatcgtggccaaacaggccggtgccgctaaggagacgaatcaaagtgcc aaagacaatctgcaaccactagttcagcaaaagaagaaagaattacctgccaagaaagca gcacttatcacggcagttacagaaaaacagaaatcaacgcaaagctgctccaatcaacaa gtacaaaacacgcaaactgcagcgaagcctaagaaatcgcggatcgctgcgaaatttggt ataccttcgcaaacggaggaatcgaatcgcagaaaagattcggtttaa

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