Megalopta genalis: 117227819
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Entry
117227819 CDS
T07400
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
mgen
Megalopta genalis
Brite
KEGG Orthology (KO) [BR:
mgen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mgen03041
]
117227819
Enzymes [BR:
mgen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117227819
Spliceosome [BR:
mgen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117227819
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
ResIII
MOEP19
CMS1
KH-I_KHDC4-BBP
KH_KhpA-B
KH_5
Motif
Other DBs
NCBI-GeneID:
117227819
NCBI-ProteinID:
XP_033339234
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MNTNRRSFGNSSHYSKSYNQGSRYRNREDQQRTNYPWREQNQDSNHSNLGNNSENLTIQI
EALKVGKLIGKSGTKIRELQDKTNTKIRVDSSNGDFNADVIITGTKAAQNEAKKLIEELL
DDSPYPIPKTVEQNKVQYNEPKIDFNNFDWTQASKQCDNYLKEKWSKFPPIVKNFYKEHP
HVASMTKEYVAHIRKINNNIEASYMFSEKEKHSEEPVPNPIETFEQAFEPYPDILEEIRK
QGFTKPSPIQCQAWPILLSGKDLIGIAQTGTGKTLAFLLPALIHIEGQETPRSERNGPNV
LVMAPTRELALQIEKEVNKYTYHGIKAVCVYGGGSRKEQITLVLKGLEIVIATPGRLNDL
VEANVLNVSSVTYLVLDEADRMLDMGFEPQIRKTLLDIRPDRQTVMTSATWPQGVRRLAQ
SYMKNPIQIFVGSLDLATVHTVVQKIHIIDEDEKPNMMNQFFHEMGPKDKVIVFFGKKCR
VDDVASDLALQGVNCQSIHGGREQADREQALEDLKTGEVQILLATDVASRGIDIEDVTHV
LNYDFPRDIEEYVHRVGRTGRAGRTGESITFMTRRDWALARELINLLEEANQEVIDELYM
MANRYDAWKERRANEKQFERSDSRGDHSYKRSNRRW
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaatactaatcgccgaagttttggaaactcttctcactactctaagagctacaatcaa
ggttcaagatatagaaatagagaagaccaacaaagaacgaattacccttggagagaacaa
aatcaagattctaaccatagtaatttaggtaacaattctgaaaatctcaccattcagatc
gaggcattaaaagtaggaaaattaattgggaagagtggaactaagattagagaactacaa
gataaaacaaatactaaaattcgtgttgacagctcgaatggagattttaatgctgatgta
attataactggaacaaaagcagcacaaaatgaagctaaaaaattaatagaagagttacta
gatgattctccgtaccccataccaaagacagtagaacagaataaagtgcaatataacgaa
cctaagatagattttaataattttgactggacccaagctagtaaacaatgtgataattat
ctaaaagaaaagtggtcaaaattcccacctattgtcaaaaacttttataaagagcatcct
catgttgctagcatgacaaaagaatatgtagcacatataaggaaaataaataataatata
gaagccagttacatgtttagtgaaaaagaaaaacattctgaagaacctgttccaaatcca
attgaaacattcgaacaggcctttgaaccttatccagatatactcgaggaaataaggaaa
caaggatttaccaaacctagtcctatccaatgtcaagcttggcctatcctccttagtggt
aaagatctcattggtattgctcaaacaggcacaggaaaaacgttagcatttttactgcca
gctttaatacatatagagggacaagaaacgccgcgatcggaacggaatggccctaatgtt
cttgttatggctccaacaagagaattagcattacaaatagagaaagaagtgaataaatat
acttatcatggtataaaagcggtatgtgtgtatgggggtggcagtcgtaaggaacaaatc
accctggtactaaaagggttagaaatagtcattgcaacgcctggaagactgaatgatctc
gttgaagcgaatgttttgaatgtttcatctgtcacatatcttgtgttggatgaagctgat
cgtatgcttgacatggggtttgaacctcaaattaggaaaacattgttagatataagacca
gatcgacaaacagttatgacaagtgccacgtggcctcaaggtgttcgacgtttagcacaa
tcctatatgaaaaatccaattcaaatttttgtcggatctcttgatttagctactgtacac
actgtggtacaaaaaattcacatcattgatgaagatgagaaaccaaatatgatgaatcag
tttttccacgaaatgggtcccaaggataaagttatagtattctttggaaaaaaatgcaga
gttgacgacgtggccagtgacttagctctgcaaggtgtgaactgtcagagtatacacggc
ggaagagaacaagctgatagggaacaagcattggaagatttgaaaaccggagaagttcaa
atacttcttgcaacagacgttgccagtcgaggaattgatatagaagatgtgacgcatgtg
ttaaattatgactttcctcgagacatagaagaatatgttcatcgagttggacgtactgga
cgcgctggacgcacaggcgaaagtataacgtttatgacaaggcgggattgggctcttgcc
agagaactaattaatctcttagaagaagctaatcaagaagttattgatgagttgtatatg
atggctaatagatatgatgcatggaaggaaagacgggcaaacgaaaaacagtttgaacga
tcagacagcagaggtgatcactcatataaaagaagtaacagaagatggtag
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