Megalopta genalis: 117228316
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Entry
117228316 CDS
T07400
Name
(RefSeq) DNA repair protein RAD50-like
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
mgen
Megalopta genalis
Pathway
mgen03440
Homologous recombination
mgen03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mgen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117228316
03450 Non-homologous end-joining
117228316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgen03032
]
117228316
03400 DNA repair and recombination proteins [BR:
mgen03400
]
117228316
DNA replication proteins [BR:
mgen03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
117228316
DNA repair and recombination proteins [BR:
mgen03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
117228316
BRCA1-C complex
117228316
NHEJ (non-homologous end-joining)
MRX complex
117228316
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
AAA_29
AAA_21
AAA_27
DUF3450
AAA_13
AAA_16
AAA_28
AAA_19
ABC_tran
Gln-synt_N
AAA_5
AAA_22
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
117228316
NCBI-ProteinID:
XP_033339907
LinkDB
All DBs
Position
Unknown
AA seq
690 aa
AA seq
DB search
MSRIRRLSLRGIRNFGDENEEAIIRFSRPLTLILGPNGTGKTTIIEALKYVTCGEFPPNS
ERGKFFIHDPALTMTSSVRAVIKAEIVDRKGNIITICRTLECSRITGTQKLKTLDNTLSR
LNKGTDKVVSITNRCVNVDTELSLIMGVSKPILDYVIFCHQEDLSWPFNEGKKLKEKFDE
IFDSTNYNKAIESIIKLMKEYTTKLKLLQEEQNSCRIIVSQVEDKEKTLRDQRRRLKTAI
EKVEEIKNELEPLVRRIKNSEKVATNYKELQIREKSKKTEYNLCKQHIDRLEENIEEEFD
GSMTELFAEIETFDEKLKGKVDTIKEFQTRVKEITEEETKISNLLARENVTSGSLKQQVK
DQERKVTNRNKILNEALMAWQLDTIDSSVSEIEVLALTKRLREKFQELEHIGEDNRARRA
GEEKELQKQVDILRNEYSKSESEKNMKESEVVATRDEIHKIKLEKIRLGDAANNLNTIES
KMQTVKTKIEHLNETLNVNTAKEEVTGKIKLRDETEAKLNAVDEEITSLLKQSSLQAELE
LHNNSLVSKEKELQKLKDKYEEIIKNLVDVKELTQIKLKNKVDTTQRELTSQIESINHQI
QMEEIRSNTLQTTISHVESELHKKRKEIESDKAQVSLFCKYQDFDESVLLQSRKLKDLQD
KRGLYAHQGVAYKDYIKQLKETSPSCPLCH
NT seq
2071 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtataagaagactttcattacggggtattcgtaatttcggcgatgaaaacgaa
gaagcaataattcgattttctcgaccactgacacttattcttggtccaaatggcactgga
aaaacaacaattatcgaagcactgaaatatgtcacttgcggcgaatttcctcccaattca
gagcgtggaaaattctttatacacgacccggctttgacaatgacatcctcggtccgagct
gttataaaggccgaaatagtggatagaaaaggaaatataattacaatatgcagaacacta
gaatgctctagaataactgggacacaaaaattaaagacccttgataatacattgagtaga
ctgaacaagggtacagacaaggtcgtatcgatcaccaacagatgcgttaatgtcgataca
gaactttcattaataatgggtgtgtccaaaccaattttggattacgttatattttgccac
caggaagatctgagttggccatttaacgagggcaaaaaattaaaagaaaaatttgatgaa
atctttgacagcacaaattacaataaagcaattgaaagtatcataaaactgatgaaagaa
tatactacaaagttgaaattattacaagaagaacaaaattcatgtcgtataatcgtttct
caagtagaagacaaagaaaaaacattgagagatcagagaagacgattgaagactgcaata
gaaaaagtagaggaaattaaaaatgaattggaacctttagttcggagaattaaaaattct
gaaaaagtggctactaactataaagagttacaaattcgagaaaaaagcaagaaaacagag
tataatttatgtaaacagcacatagacagattagaagaaaatatagaagaagagtttgat
ggttcgatgacagaattatttgctgagatagaaacgtttgatgaaaaattaaaaggaaaa
gttgataccataaaagagtttcaaacaagagtaaaagaaattactgaagaggagaccaag
atatcaaatttattagccagagaaaatgtcaccagtggttctttaaaacaacaagttaaa
gatcaggaaagaaaagttactaatcgcaataaaatattaaatgaagcattaatggcatgg
caactggatactatagattctagtgtttcggaaatagaagttctagctttaaccaaaaga
ttacgagagaaattccaagagttagaacacattggagaggacaatagggcaagaagagca
ggagaggaaaaagaattacaaaaacaagtggacatactgcgcaatgaatattcgaaaagt
gaatccgaaaaaaatatgaaagaaagtgaagtagttgctacgagagatgaaattcataaa
ataaaattggagaaaatacggcttggagatgctgctaataacttaaacaccatagaatcc
aaaatgcaaacggtaaaaactaaaattgaacatttgaatgaaacattgaatgtaaataca
gcgaaggaggaagttactggtaaaataaaattaagagatgaaaccgaagcgaagttgaac
gctgtcgacgaggaaataacttcattattaaaacaaagttcgttacaagccgaactggaa
ttgcataataattcattagtatcgaaggaaaaggaattacagaagttaaaagataaatat
gaagaaattataaaaaacttagtggatgtcaaagaactgacacaaattaaattaaaaaat
aaagtagatacaactcaaagagaattgacaagccaaatagaatctattaatcaccaaatt
caaatggaagaaattcgatctaatacattacaaacaacaatatcgcatgttgagagtgag
cttcataaaaaaaggaaggaaatagaatctgacaaagcacaagtttctttgttttgtaaa
tatcaagattttgatgagtctgtgttattgcaatccagaaaattaaaagatttacaagat
aaaagaggtttatatgctcatcaaggagttgcttataaggattatataaaacaattgaag
gaaacaagtccttcttgccctttatgtcaca
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