Megalopta genalis: 117228346
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Entry
117228346 CDS
T07400
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
mgen
Megalopta genalis
Pathway
mgen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mgen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117228346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mgen03041
]
117228346
Spliceosome [BR:
mgen03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
117228346
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_Gbeta
EIF3I
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
PRP4
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_WDR41
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_IFT122_1st
WD_LRWD1
Beta-prop_SCAP
Beta-prop_IFT140_1st
Ge1_WD40
Beta-prop_HPS5
Beta-prop_Nup120_160
WD40_like
Motif
Other DBs
NCBI-GeneID:
117228346
NCBI-ProteinID:
XP_033339939
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MSDDEDLVYVKKQKTVHYGSLEETERARLAAAAESSEEEKDATNLGDGVNAVITLGNVHI
SNEYMELEDEMSKDRQALLEEFERRKKARQINVSTDDSEVKKNLRQLGEPICLFGEGPAD
RRTRLRELLASLGEDAIKKKHEEEEKPSHAIERDTETTWYHEGPESLQIARSWISSYSLP
RAKARLDKARQDLELPTATRTARRQELLKKLQALTIYCSQIGDTRPISFCQFSPNSKLFA
TASWSGLCKIWSVPDCTLLRTLKGHTCNVGCIVFHPKATITEEVVGDKSGQTCVLASCAS
DGTVKLWSGGSGEEPLAEVEGHEPHRVSRLAFHPSGRFLGTCCYDASWRLWDLEQQAEVL
HQEGHARAVHCISFQCDGSVSATGGHDSFGRVWDLRTGRCIMFMEGHLKSIFGIDFSPNG
FHIATASEDNTCKIWDLRKRSCIYTIPAHTNLLSDVKYQRLEGQYLVTASYDSTAKIWSN
KTWQPLKTLPGHDGKVMSVDISPDHKFIGTSSYDRTFKLWAPENM
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgacgaggacttggtctatgtcaagaaacagaaaactgttcactatggatct
ctggaagaaactgagcgtgcgagactggctgccgcagcggaatcctccgaggaagagaaa
gatgctacgaatttgggagacggtgtcaatgctgttatcactttgggaaatgtccatata
tccaatgaatatatggaacttgaggatgagatgtctaaggatagacaagctctcctagaa
gaattcgagcgtaggaaaaaagctcgtcaaataaatgtatctaccgatgattctgaagtg
aaaaagaatttgagacaattaggagaacctatatgtctgttcggcgaaggcccggcggac
agaagaacaagattaagagaattgttggctagtcttggcgaggatgctatcaaaaagaag
cacgaagaagaagagaaaccttcgcatgccattgaaagggacacagaaaccacttggtac
cacgaaggaccagaatctcttcaaatagcacgttcttggatatcatcatattcattacct
agagcaaaggctagactggacaaagcgagacaggatttagagctgccaacagctacacgc
accgcacgtcgtcaggaacttctaaagaagttgcaggcactgacaatctactgctctcaa
attggtgacaccagaccgatctctttctgtcaatttagcccgaactccaagctgtttgcc
acagcctcgtggtcaggcttgtgtaaaatatggtctgtacctgattgtacactgttgcga
acccttaaagggcatacttgtaatgttggctgcattgtttttcatccaaaagctaccatt
accgaagaggtggtaggagacaaatcagggcagacctgtgtactggcatcctgtgcttca
gatggaacagtaaaattgtggagcggaggatcaggcgaagagccattagctgaagttgag
gggcacgagccacacagagtatcgaggcttgcgtttcacccttctgggcgatttttgggc
acgtgttgttacgatgcgtcttggagactttgggacttggaacaacaggctgaggtgtta
catcaggaaggtcatgcacgagcagtacattgtattagctttcagtgtgatggtagtgtg
agtgccacaggtggtcacgactcctttggtagggtatgggatcttcgtacaggaaggtgt
atcatgtttatggaaggacacttgaagtcgattttcggtatcgacttttccccgaatggg
ttccacatagccacagcaagcgaagacaatacgtgcaaaatatgggacctgcgaaagaga
tcttgtatatatacgataccagctcacactaacttattatcggacgtgaaatatcagaga
ttggaagggcaatatctggtcacagcatcatacgatagcacagctaaaatatggtcgaat
aaaacctggcaacctctaaaaacgctacctggtcacgacggtaaagttatgtctgttgac
atttcgcctgaccacaaatttatcgggacaagttcctacgacagaacattcaagttgtgg
gcacccgaaaatatgtaa
DBGET
integrated database retrieval system
