Megalopta genalis: 117229689
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Entry
117229689 CDS
T07400
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
mgen
Megalopta genalis
Brite
KEGG Orthology (KO) [BR:
mgen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgen03021
]
117229689
03036 Chromosome and associated proteins [BR:
mgen03036
]
117229689
Transcription machinery [BR:
mgen03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
117229689
Chromosome and associated proteins [BR:
mgen03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
117229689
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
SH2
HHH_3
HHH_9
Tex_YqgF
Spt6_S1
S1_RRP5
HTH_10
Tex_N
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
117229689
NCBI-ProteinID:
XP_033342219
LinkDB
All DBs
Position
Unknown
AA seq
1769 aa
AA seq
DB search
MADFLDSEAEESEEEEELDENEKKKLKKIKAVEESEEEEEEDDEDRLREELKDLIDDNPI
EESEGEDSDGSGTSKKRKKSDDEDFDDRLEDEDYDLIEENLGVKVERKRFKRLRRIQDEE
SEEEQEKEVDEDRDAIANELFEGSGDEREISMEDERRSERSHRPEVETFDEEGSEGEYTD
ADDFIVDDDGRPIAEKRKKKKPIFSDAALQEAQDIFGVDFDYDEFGKYGEEDYEEEEEEE
EEEDEYMDEEDAERPRRPKKQLKKKTTRKSIFEIYEPSELKRGHFTDMDNEIRNTDIPER
MQLRSVPVTPVAEGSDELDLEAEWIYKQAFCRPTISIQDAHLNAEAKERARKGPQTIGKI
KKALDFMRNQHFEIPFISFYRKEYVLPELNINDLWKVYKFDAKWCQLRQRKDNLLKLFEK
MRNHQLDEIMKNPDAPLADNVRVIKDDDIERLKNVQTSEELNDVYHHFMLYYSQEIPAMQ
ESVRQKEKEARREAKLLKRRQQLAEAEENGEDPPPEEEPEVELEEEPDETLKQAVRTGPY
SICRRAGLDGLAKKFGLTPEHFAENLRDNYQRHEVDQEPTEPLSIASEHCNQILGTPEEV
LKAGQLMVAIQLAREPLVRKCVREMYMERAKISVKPTKKGVKEIDENHPIYAMKYLKDKP
VRDLVGDQFLNLIIAEEDKLITISLSDSIEGNTSSNYVDETKQLYYRDEFSKNVQDWNAL
RVGSVEMALTRMVIPSLKKELRTNLIAEAKECVMRACCRKMYNWIKVAPFTCELPEEEDE
EWDTSKGLRVMGLAYVPDYSQAAFTCLIAPDGECTDYLRLPHLMKRKNSYREDEKVMKEA
DLLALRNFLATKKPHVVVIGGESREAMMIAADVKECIATLAEEEQFPAIQVEICDNELAK
IYSNSNKGVSEFRDYPELLRQAISLARRMQDPLVEFSQLCTADEEILCLKYHSLQDQLPK
DELLENLYLEFVNRVNEVGVDVNKAVQQAYCGNLVQFVCGLGPRKGQALIKMLKQTNQRL
ENRTQLVTACHMGPKVFINCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAV
DALEYDDEDANPAGALEEILESPERLKDLDLDAFAEELERQGFGNKCVTLYDIRAELNCR
YKDLRVPYQSPSAERLFDILTKETPETFYVGKLVLATVVGISHRKPQGDQLDQANPVRND
ETGLWQCPFCLKNDFPELSEVWNHFDAGACPGKATGVRLRLDNGISGYIHIKNLSDRHVA
NPEERVSIGQIIHCRIIKIEVERFSVECTSKSSDLADKNHEWRPQRDPFYDTETEQKDVK
VEEDAKKAKQRQTYVKRVIVHPSFHNISFAEAEKLMQTMKQGEAIVRPSSKGADHLTVTW
KVTDEVYQHIDVREEGKENAFSLGQSLWIGNEEFEDLDEIIARHVNPMAAYASELLDFKY
YKLTVEGIKDKAEEILKEQKKENPGGIPYIISAAKNYPGKFLLSYLPRTRCRHEYVTVSP
EGFRFRGQMFGRVNDLFRWFKEHFRDPVPGQSTPSTPRGAMTSRTPYHTTPGAVSGMNQE
AIQRVAQNLPHHMLHSLSQVANQTPHHYPPHTPGTASVAGYGGVHTYPNTPYTPSGQTPF
MTPYQTPHHTPHHGQPTPRYGQQTPNHQQGPFVHPPPPSVATPGHHRSTPSHRPTPPMST
PGDPMDWKKAAEAWARLKTGPRMSSSTPRYEESRKTPRNYEESVGRTTPRNRTSTRTPSY
KSPRGTPHTNSSPRSMSLSGDGTPLYDES
NT seq
5310 nt
NT seq
+upstream
nt +downstream
nt
atggctgattttctagattccgaagcggaagaaagcgaggaggaggaggagttggatgaa
aatgaaaagaaaaagttgaagaagataaaggccgtcgaagagagcgaagaggaggaggag
gaagatgatgaagatcgcttacgcgaggaacttaaggatctgatagacgacaatcccatc
gaagaaagcgaaggagaggacagcgatggatctggtacttcgaaaaaacgtaaaaaaagc
gacgacgaggactttgatgatcgcctggaggacgaggattatgatttgatagaagaaaat
ttaggtgttaaagttgaaaggaaacgtttcaaacgcctccgcaggatacaagatgaggaa
tctgaagaagaacaagaaaaggaggtggacgaggatagggatgctatcgcgaatgagcta
ttcgagggttctggagacgaaagagaaattagtatggaagacgaacggagaagcgaacgg
agccacaggccggaagtggagacgttcgacgaggaaggaagcgaaggggagtacaccgac
gcggatgattttattgtcgacgatgacggcagaccgatcgccgagaaacgtaaaaagaaa
aagcctatattttcggacgcggcattgcaagaggctcaagatatttttggtgttgatttc
gattacgatgagttcggtaagtatggcgaggaggactatgaggaagaagaagaggaggag
gaggaggaggacgaatacatggacgaagaagatgccgaaagaccgagaagaccaaagaaa
caattgaagaagaaaaccacaagaaagagtatcttcgaaatttacgaacccagcgaactg
aaacgtggccatttcaccgacatggacaacgaaatacgcaacacggatatacctgaaaga
atgcagctccgttcggttcctgttacacctgtcgcagagggttctgatgagttggatctg
gaagccgagtggatctataagcaagcgttctgtcgcccgacaatctctattcaagacgct
cacttgaacgccgaggccaaagagagagctcgaaagggaccgcagacgattggcaaaatt
aaaaaagctctagactttatgcggaatcaacatttcgaaattccgttcatatcgttttac
agaaaagaatacgttctgccggagctgaatatcaatgacctttggaaggtgtacaaattc
gacgcgaaatggtgtcagctgcgccagaggaaggataatctattgaaattgttcgaaaag
atgcgaaaccaccagctcgacgagatcatgaaaaatcccgacgctccgttggccgacaac
gtacgagtgatcaaggatgacgacatagaacggctgaagaacgtgcaaaccagcgaggaa
ttgaacgacgtgtaccatcatttcatgctctactacagccaggagattccggcgatgcag
gagtctgttcgacaaaaagagaaagaggcgcgacgagaagcaaagcttctaaagcgtagg
caacagctcgcggaagccgaagaaaacggcgaggatccgcctccggaggaagaaccggaa
gtcgagctggaggaggagccagacgagactttgaaacaagcagtacggactggcccgtac
tcgatctgcaggcgagccggactcgatggtttggcgaagaaattcggcctgacgccggaa
cactttgccgagaatctgcgagacaattatcaacgacacgaggtggaccaggagcccacg
gaaccgttgagcatcgcgagcgagcactgcaaccagattctcggaacgccggaagaggtg
ctgaaggccgggcagctgatggtggcgatacagttggcccgcgagccactggtcagaaaa
tgtgtacgggaaatgtacatggaaagagcgaagatatcggtgaaaccaacgaaaaagggg
gtcaaggagatcgacgagaaccatcctatctacgctatgaagtatctgaaggacaagccc
gtgcgtgatctcgtcggtgatcagttcttaaatctgataatagccgaagaagacaaactg
atcacgatctcgttaagcgacagcatcgagggcaacactagtagcaactatgtcgatgag
acgaagcagctctattatcgggacgagttcagcaaaaatgtccaagactggaacgctttg
agagtcggcagcgtggagatggcgttgacgcgtatggttatacccagcctgaagaaagaa
cttagaacgaatctaatcgcggaagctaaggaatgcgtgatgagagcgtgctgccgtaaa
atgtacaattggatcaaagtggctccgttcacctgcgagctgccggaagaggaggacgag
gaatgggacaccagcaaaggacttcgcgtgatgggtttggcgtacgttcctgattactct
caggccgcgttcacctgcctcatagccccggacggcgagtgtaccgattacctgagacta
ccgcatctgatgaaacggaagaacagctaccgggaagacgagaaagtcatgaaggaagcc
gacctgttggccctgagaaatttcctagccacgaagaagccacacgtggtggtgatcgga
ggcgagtctagggaggcgatgatgatcgcggccgacgttaaggaatgcattgcgaccctg
gcggaggaggaacagttcccggctattcaagtcgagatttgcgacaacgaactggccaaa
atctattcgaacagtaacaagggcgtgtccgaattccgggactatccggagctgttgcgg
caggcgatctcattggccagacgaatgcaagatcctctggtcgagttctctcaactgtgc
accgccgacgaggagatcctctgtttgaagtaccacagcttgcaggatcaattgccgaag
gacgagctcctcgaaaacctgtatctagagttcgttaacagggtgaacgaggtcggtgtc
gacgtgaacaaggcggtacagcaagcctattgtgggaacctggtgcaattcgtatgcggt
ctcggcccgaggaaaggccaagcgttgatcaaaatgctgaagcaaaccaaccaaaggtta
gagaacagaacgcagctggtgaccgcttgtcacatggggcccaaggtttttattaattgc
gcgggttttatcaagatagatacgaatagcttgggagacagcaccgaagcgtacgtggag
gtgctcgatgggtcccgtgtgcatccagagacctatgaatgggcgaggaaaatggctgtc
gacgcgctcgagtacgatgacgaggacgcgaaccccgccggtgctctcgaagagatcctc
gagtcgcccgagaggctgaaggacttggatctcgacgcgtttgcggaggagctcgaaaga
cagggattcggtaacaagtgcgtcacactctacgacattagggcagagctgaattgtcgt
tacaaagatctgcgagtgccgtatcagtcgccgagcgcggagagattgttcgatattctg
accaaggagacgccagaaacattctatgtgggcaaactggtcctggcaaccgtcgtgggt
atcagccataggaaacctcagggcgatcaactcgaccaggcgaatcccgtaagaaacgac
gagactggtctttggcagtgcccgttctgcttgaagaacgacttccccgagctctccgag
gtctggaatcattttgacgccggtgcttgccccggtaaagcaaccggcgtcaggttgagg
ctggacaacgggatatccggctacattcacattaagaacttgtccgacagacacgtcgcc
aatcccgaggaaagagtcagcatagggcagatcattcattgccgcatcatcaaaatcgag
gtcgaacgattcagcgttgagtgcaccagcaagagtagcgatctagcagacaagaaccat
gaatggagaccgcaacgcgatcctttttacgacaccgagacggagcagaaggacgtcaag
gtcgaggaggatgcgaagaaggcgaaacaacgacaaacttacgtgaagcgagtgatcgtc
catccgtctttccacaatatcagtttcgcggaagcagagaaattgatgcagaccatgaag
caaggtgaagcaatcgtcagaccgagcagcaagggtgctgaccatttgacggtcacgtgg
aaggtcaccgacgaagtctaccaacacatcgacgttagggaagaaggaaaagaaaatgcg
ttctcgttgggacaaagcttatggatcgggaacgaagagttcgaagatctggatgagata
atagcgaggcacgtgaacccgatggccgcgtatgcctcagagttgttggacttcaagtac
tacaaacttaccgtggagggtattaaagacaaggccgaggaaatactgaaggagcaaaag
aaagagaatcctggaggaataccgtacataatatccgctgccaagaattatcctggtaaa
ttcctattatcctacttgccgcgaactcggtgtcgccacgagtacgtcacagtgtcgccg
gaaggatttcgattccgaggacaaatgttcggtagagtgaacgacctgtttcgctggttc
aaggagcatttcagagatccggtgccaggacaatcgactcctagcactccacgtggtgca
atgacttccagaacaccttaccacactactccgggagcagtaagcggaatgaatcaagaa
gcgatacaaagagtagcccaaaatcttcctcatcacatgctacactctctgtcacaagtg
gcaaaccaaactccacatcactatccaccacatactccgggaaccgcaagcgtggctggt
tacggtggtgttcacacctacccgaacacaccatacacgccatccgggcaaacgccattc
atgacaccgtaccagacgccgcatcacactccacaccatggtcaaccgactcccagatat
ggacagcagacgcctaatcatcaacagggtcccttcgttcatccacctcctccctcggtc
gccactccaggtcaccataggtccaccccatcgcacagacctacgcctcctatgtcgaca
cctggcgacccgatggattggaaaaaggcagccgaggcctgggcgagattgaaaactggc
ccccgaatgtccagctcgacgccaagatatgaggaatcgaggaaaaccccgcgaaactat
gaagaatccgtcggtagaacaaccccacgaaacagaacatcgacgcgcacaccatcttac
aaatctccacggggaacgccgcatactaattctagtcctcggagtatgtctctcagcgga
gacggtactcccctgtacgatgaaagctaa
DBGET
integrated database retrieval system
