Megalopta genalis: 117230115
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Entry
117230115 CDS
T07400
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
mgen
Megalopta genalis
Pathway
mgen03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mgen00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117230115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgen03021
]
117230115
Enzymes [BR:
mgen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117230115
Transcription machinery [BR:
mgen03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
117230115
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
TFIID-18kDa
Motif
Other DBs
NCBI-GeneID:
117230115
NCBI-ProteinID:
XP_033343116
LinkDB
All DBs
Position
Unknown
AA seq
1705 aa
AA seq
DB search
MAQIKYRASRLTPKHLDPNCLMFSMFTANDIRNLSVTKIRTPLSFNILGHPLKGGLYDPS
LGPLIESSDPCATCGCNVIKCPGHFGHIELPVPVVNPLFHKGLCMLIKLSCLKCFVLQIP
PYVKLLLQAKMKLLQEGYISELEGLEQEVMFLVADSNNPYDIDVVLIQDIIDTYIERLVN
RSRFSQSIVQHDKMQFNTKNINTQWHVYVENILKQYLTPKTCKYCKEIIPKVTNLKNKIM
TVKMIDDTTAQSNETIHKLNTVMIMPNQSKEYLRSLWQNEKDFLKVIIPCFGMVDIEYPT
DIFFFEIVPVLPPIVRPVNFVDGQMVEHPQTQVYKSIIQDCLVLRNIIQTIQDGDTNQLP
EEGRLVFEQIKGDTAIEKLHNGWQSLQINVDHLMDRDMNRTVDSANCQGLKQIIEKKEGV
IRMHMMGKRVNYAARSVVTPDPNLNIDEIGIPEIFAMKLTYPTPVTPWNVVYLRQLVLNG
PEVYPGAVMIENEDGSIQRISSTNATQREATAKRLLTTSDKANKFFRGIKIIHRHLQNGD
ILLLNRQPTLHKPSIMAHKARILKGEKTLRLHYANCKAYNADFDGDEMNAHFPQNELARS
EGYNIASVPNQYLVPKDGTPLSGLIQDHMVSGVRLTVRGTFFTKQDYMQLVYAALSTIQE
NILLLPPSIIKPVPLWSGKQIVSTVIINIIPSNQARINLVSNAKINAKEWQTTKPRSWKC
GVEFSDPKTMSEAEVIIRNGELLCGILDKTHYGATSFGLIHCVYELYGGICSTNLLSAFG
KLFQAALQRNGFTLGIEDILLVMKADTKRKEIISRCRQIGEDIQRSVLEVPEDTPMDMVT
AKMEESYWSNPKFRTQVDRKYKTALDICTNDINKTCLPAGLLKKFPDNNLQLMVQSGAKG
STVNTMQISCLLGQIELEGKRPPLMISGKSLPSFPAYDPTPRAGGFIDGRFMTGIQPQEF
FFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLVINYDSTVRDSDGSLVQIYYGEDGL
DILGSRFLRKELIDFLVDNRNAIVNEEVVKSLKEDSDISKILKLVKKIKKWESKHGKALQ
KRRISAFAKFSKQDMKIKTSKYEQLDENSGRSKATLSLMRKWVRASYEEKNAFYAQCNRC
PDPVTSLYRQDIDFGVLPEQIENLIDEYITNKSVNTHIRKSDLRDLMSMKVMKIVCPPGE
PVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMMASKNIKTPSMEIPFK
KNLKNVTKQANKLRVNLNKCILSNVLNDITISRKLEHWPNRRLLYTMTINYFPYKSYKGE
FCMQPYEILKKTEEIFFKELFKEIKKVAKVTGALLHIEEEKKSTRDDTLLDEGEPDERTE
SSMTSRRRLGEMHESSDEDEAAEDADATLSRSISRHRENQEYEDPEEDEMDDINEREDDT
TVENDNEKSRPVQEQQNIDDDEDIENEKSGCAASEMYNTQRRKDVVNMYHHVEQYDYDED
EYSWCKLTFWLPLQMVKLDLPTIIRNVANRVVFWEVPCIKRAFTFQNNNGDTVLKTDGIN
IIEMFKYDIALDLNRLYSNDIYGISQTYGIEAANRVIIKEVKDVFKVYGITVDPRHLSLI
ADYMTFDGRFQPLSRKGMEDSASPLQQISFESSLNFLKYATLQGKQDYLVSPSSRLMLGQ
PCNSGTGACSLLLKLQKQPDITLPT
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaattaaatatcgagcatcacggttaactccaaaacatttggatccaaactgc
ttaatgttttctatgttcactgcaaatgacatacgaaatttaagtgttactaaaataagg
acacctttatcattcaatatattgggacatccattgaaaggtggactatatgatccatca
ttaggtccacttatagaaagttctgatccatgtgcaacgtgtggatgtaatgtaataaaa
tgtccaggtcattttggtcacatagaattgccagtacctgttgtgaatcctttattccat
aaaggattatgtatgctgatcaagctatcctgtttaaaatgctttgttctacagattcca
ccatatgtaaagttactattgcaagcaaaaatgaagttacttcaagaaggatacatcagt
gaattggaagggttggagcaggaagtaatgtttcttgttgcagattctaacaacccttat
gacattgatgtggtactaatacaagatattattgatacatacatagagagacttgttaat
cgatccagatttagtcagtccattgtgcagcacgataaaatgcaatttaacacaaagaat
atcaatacacaatggcatgtatatgttgaaaatatactgaagcaatatttgacaccaaaa
acgtgcaaatattgtaaagaaattataccaaaagttacaaatttgaagaataaaattatg
actgttaaaatgatagatgatactactgcacagtcaaatgaaacaattcataaactgaat
acggtaatgataatgccaaatcaatctaaagaatatcttagaagtctctggcaaaatgaa
aaagattttcttaaagtaattattccctgttttggaatggtagacatcgaatatccaacc
gatatatttttctttgaaatagtaccagttttaccacctattgttcgaccagtcaatttt
gttgatggtcaaatggtagaacatccgcaaactcaagtctacaaaagtattatccaagac
tgcttggttcttagaaatattattcaaacaattcaagatggagatacaaatcagttgcca
gaagagggcaggcttgttttcgaacaaataaaaggtgacacagcaatagaaaaattgcac
aatggttggcaaagtttgcaaataaatgtggatcatttaatggatcgcgatatgaacaga
acagtggattctgctaactgtcaaggactcaaacaaattatagaaaagaaggaaggagtt
attagaatgcacatgatgggtaaacgagtcaactatgctgctcgttcagttgttacaccc
gaccctaacttaaatatagatgaaatcggaattcccgaaatttttgcaatgaaattaacg
tatccaactcctgttacaccttggaatgttgtatatctacggcaattagttttaaatgga
cctgaagtttatccaggagcagtaatgattgaaaatgaagatggaagtatacaacgaatc
tcttctaccaatgctactcagagagaagcaactgcaaaacgattgttaacgactagtgac
aaagcgaacaagttcttcaggggtattaaaattatacataggcatttacagaatggagat
attttattgctcaatcgtcaaccaactttgcacaaacctagtataatggctcataaagcg
cgcattctaaaaggagagaaaacgttgcgtcttcattacgctaattgtaaggcatataat
gccgactttgatggtgacgaaatgaatgcacattttcctcaaaatgaacttgctagaagc
gaagggtacaacatagcaagtgtgcctaatcaatatcttgtaccaaaggatggtactcca
ttaagtggtcttattcaagatcacatggtttctggtgtacgcttaacagtaagaggaaca
ttcttcactaagcaagattacatgcaattagtttatgctgccttatcaacaattcaagaa
aacatccttcttcttccgcctagtattataaaacctgtaccgttgtggtctggaaaacaa
attgtatccactgttattatcaatatcattccatcgaatcaagcacggattaacctagta
tcaaatgccaaaattaatgcaaaagagtggcaaactacaaaaccccgatcttggaaatgt
ggtgttgaattttctgatccaaaaacgatgtcagaagcggaagtaattatacgaaatgga
gaattattatgcggtatactggataaaacacattatggtgctacttcatttggtctcata
cattgcgtgtacgagctgtatggtggaatatgctctacaaacttgttgagtgcctttggt
aaattgttccaggctgctttacaaagaaacggattcacacttggcatcgaagatatttta
ctggtaatgaaagcagacacaaagcgtaaagaaatcatttccaggtgtagacagatcgga
gaagatattcaaagatctgtgctagaagtaccagaggatactccaatggatatggttaca
gcaaaaatggaggagtcttattggagtaatccaaaatttcgcacgcaggttgacagaaaa
tacaaaactgcattagacatttgtactaatgatataaataaaacatgtttaccagctggt
cttttgaagaagtttccagataataatttacaattaatggtgcaatctggtgctaaaggt
tcaaccgtaaatactatgcagatatcgtgtttgttggggcaaattgaattggaaggaaaa
agaccacctttaatgataagtggaaaaagtcttccaagttttcctgcttacgatccaaca
ccaagagcaggaggtttcattgatggtcgttttatgacaggcatacaaccgcaagaattt
ttctttcactgtatggcaggtcgcgaaggtctcattgatacagccgtgaaaactagtaga
tcaggatatctgcaacgatgtcttattaaacatcttgaaggattggttattaactatgat
tcaacagtacgcgattcagatggcagtttagtacaaatttattatggagaggatggactt
gatatattaggctcaagatttttaagaaaagagctaattgactttttagttgataataga
aatgctattgttaacgaggaagtggttaaaagtttgaaagaagattctgatattagcaaa
attttaaaattggtaaagaaaattaaaaaatgggaaagtaaacatggaaaagcattgcaa
aagagaagaattagtgcttttgcaaaattttcaaaacaagatatgaaaattaagacatca
aagtatgagcaactcgatgaaaacagcggaagaagtaaagctacactttcactgatgaga
aaatgggtaagagcctcgtatgaggaaaaaaatgctttttatgcgcaatgtaacagatgt
cctgatcctgtaacgtcactctatagacaagacatagactttggtgtgcttcctgaacaa
atagaaaatttaatagacgaatacattactaataaatctgtaaatacccatataagaaaa
agtgatttaagagatctcatgtcaatgaaagtaatgaagattgtttgtccacctggtgaa
ccagtaggtttattagcagcacagtcaattggagaaccatcaactcagatgacattaaac
acattccactttgctggtcgtggtgaaatgaacgtcactttgggtataccaagattacgt
gaaatacttatgatggcatctaaaaatattaaaacacctagcatggaaataccttttaaa
aagaatttgaaaaatgtaacaaagcaagctaataaactacgagtaaacttgaacaagtgt
attttgtcaaatgtattaaatgatattacaataagtaggaaactggaacactggccaaat
agaagattgctatacactatgaccataaattattttccatacaagtcctacaaaggagaa
ttttgcatgcaaccatatgagatactgaaaaagacagaagaaatattttttaaggaactg
tttaaagaaattaagaaagttgccaaagtaacgggggctttgttacatattgaagaggaa
aagaagtctacgcgcgatgatactttgttagatgaaggtgaaccagatgaaagaacagag
tcttcgatgacatcacgaagacgtttaggggaaatgcatgaatcttcggatgaggatgaa
gcagcggaagacgcagacgcgaccttgtctcgatcaatttctcgacatagagaaaatcaa
gaatatgaagacccggaagaagatgaaatggatgatataaacgaaagggaagatgatact
actgttgaaaatgacaatgagaaatcgagacctgtacaagaacagcaaaatatagatgac
gatgaagacatcgagaatgaaaagtcaggatgtgctgcaagtgaaatgtacaatacacaa
agaaggaaagatgttgtaaacatgtatcatcatgtagaacaatatgactatgatgaagat
gaatattcatggtgtaaattaacattttggctacctctccaaatggtgaaattggactta
ccaacaatcattagaaatgttgcaaacagagtcgttttttgggaagtaccatgtataaaa
cgtgcttttacatttcagaataacaatggtgatactgttctcaaaacggatggtataaat
ataatcgaaatgtttaaatatgacattgcattagatttaaatagattatattctaatgac
atttatggtatttctcaaacttacggtattgaagcagctaatagagttattattaaagaa
gtgaaagatgtattcaaagtgtatggtatcacagttgatccacgtcatttgtcactaatt
gcagactacatgacatttgatggtagatttcaacctcttagccgaaaaggaatggaagat
tctgcatctcctttgcaacaaattagctttgaaagttctctcaatttcttaaaatatgcc
acattacaaggaaaacaagattatttggtgtctccttctagtcgtttaatgttaggccaa
ccttgtaattctggaactggggcctgttcactgttattaaagttacaaaaacaaccagat
attactttgccgacataa
DBGET
integrated database retrieval system
