Marinobacterium iners: CFI10_00590
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Entry
CFI10_00590 CDS
T07136
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mgeo
Marinobacterium iners
Pathway
mgeo03420
Nucleotide excision repair
mgeo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mgeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFI10_00590
03430 Mismatch repair
CFI10_00590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgeo03400
]
CFI10_00590
Enzymes [BR:
mgeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFI10_00590
DNA repair and recombination proteins [BR:
mgeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFI10_00590
MMR (mismatch excision repair)
Other MMR factors
CFI10_00590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
RWP-RK
Motif
Other DBs
NCBI-ProteinID:
QSR33507
LinkDB
All DBs
Position
complement(128377..130587)
Genome browser
AA seq
736 aa
AA seq
DB search
MDVTHIIDSLNDAQRQAVTADLNNLLVLAGAGSGKTRVLVHRIAWLIETEGLSPYSIMAV
TFTNKAAREMRGRIEHLLGINTHGMWVGTFHGLAHRLLRAHWRDAGLRDNFQIMDSDDQL
RLVKRLCKEMNLDDSRWPARQFQWFINGQKDEGLRSAHIERTGDPFQAMMIRVYEAYEEA
CERGGMIDFGELLLRALELLRDRAPQLLKHYRERFRYVLVDEFQDTNAIQYAWLRLLCEG
ENKLMAVGDDDQSIYGWRGARIENIQHLEQHFPGTETIRLEQNYRSTGTILGAANAVIQN
NFGRLGKELWTELGDGEPISLYSAFNEQDEARFIVDQIQKWVEEGNRRDESAILYRSNAQ
SRVLEEMLIRAGMPYRIYGGQRFYDRLEIKNALAYLRLLANRDDDTAMERVINVPTRGIG
TRTIEAIREHARDENVSMWRAANEITELKTLPARANNALQAFVDLINQLDANTRGTELHE
QTEHVVQHSGLIEHHEKEKGEKGQSRIENLEELVNAARQFAGQWQEDNEEGFNSPLAAFL
DQAALDAGEAQADVHTDSVQLMTLHSAKGLEFPLVFLAGMEEGLFPHSMSAEEPGRLEEE
RRLCYVGITRAMQKLYMTYAESRRLHGKETFNRVSRFINEIPAEHIEEVRLNATVRRPYS
SGYDSESSLFGGGSSLSSAEIPSTDLRLGQAVMHAKFGAGMVTNFEGSGPKARVQVNFEE
AGSKWLVVGFANLQPL
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggacgttacacacatcatcgactcgctcaacgacgcccagcggcaggcggttaccgct
gatctgaacaacctgctggttctggcaggtgccggttccggcaaaacgcgggtactggtg
caccgcatcgcctggctgatcgaaaccgaaggcctgtcaccctattcaatcatggcggtg
acctttaccaacaaggcggcacgggagatgcgcgggcgaatcgagcacctgctggggatc
aacacccacggcatgtgggtgggcaccttccacggtctggcacatcgcctgctgcgtgcc
cactggcgcgatgccggactgcgcgacaacttccagatcatggacagcgacgaccagctg
cgcctggtcaagcgcttgtgcaaggaaatgaacctggacgacagccgctggccggcacgt
cagtttcagtggttcatcaatggccagaaagacgaaggcctgcgcagcgcccatatcgag
cggacgggcgatccgttccaggcgatgatgattcgggtctatgaagcctacgaagaggcc
tgtgaacgaggcggcatgatcgattttggcgaattgttgctgcgggcactggaactgctg
cgcgaccgcgcgccccagctgctcaagcactaccgcgaacgtttccgctatgtgctggtg
gacgagtttcaggataccaacgccattcagtatgcctggctgcgcctgctgtgtgagggc
gagaacaaactgatggcggtgggcgatgatgaccagtcgatctacggctggcgcggtgct
cgcatcgagaacatccagcatcttgaacagcacttcccgggtaccgaaaccatccgtctg
gagcagaactaccgctccaccggcaccattctcggcgccgccaacgccgtgatccagaac
aacttcggccgcctgggcaaagagctgtggaccgagcttggcgatggtgagccgatatcg
ctctacagcgcattcaacgagcaggacgaggcacgcttcatcgttgaccagatccagaag
tgggtagaagagggtaatcgccgagatgaatcggccattctataccgctccaacgcccag
tcgcgggtgctggaggagatgctgatccgagcgggcatgccctatcgaatctacggtggc
caacgcttctatgaccggctggagatcaagaacgcactggcttatctgcgtctgctggcc
aaccgcgatgacgataccgccatggagcgagtgatcaatgttcccacccgcggtatcggt
acccgcaccatcgaggcgattcgcgaacacgcccgagacgagaacgtttccatgtggcgg
gccgccaatgaaatcaccgaactgaaaaccctgcccgcccgcgccaacaatgcgctgcag
gcctttgtcgacctgatcaatcagctggacgccaatacccgtggtaccgagttgcacgaa
cagaccgagcatgtggtgcagcattccggcctgattgagcaccacgaaaaagagaagggc
gagaagggccagtctcgtatcgagaaccttgaggagctggtcaacgccgcccgccagttt
gccggccagtggcaggaagacaacgaagagggcttcaattcaccgctggcggcattcttg
gaccaggcggcactggatgccggtgaagcccaggccgatgtgcacaccgacagtgtacag
ctgatgacgctgcactccgccaaggggctggagttcccgctggtgttcctggcgggcatg
gaggagggtctgttcccgcacagcatgtcggcggaagaaccgggcaggctggaggaggaa
cgccgcctctgctacgtgggcatcacccgcgccatgcagaagctgtacatgacctacgcc
gagtcacgccgcctgcacggcaaggagacctttaaccgcgtatcgcgcttcatcaacgag
ataccggcagagcatatcgaagaggtacgccttaacgccacagtacgccgtccctacagc
agcgggtacgattcagagagcagcctgttcgggggtggcagctcgctgtccagcgccgag
atccccagtaccgatctgcgcttggggcaagcagtaatgcacgccaaattcggcgcaggc
atggtgaccaacttcgagggcagtggccccaaggcacgggtacaggtcaacttcgaagaa
gccggcagcaagtggctggtggtgggttttgccaacctgcaacccttgtaa
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