Marinobacterium iners: CFI10_01350
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Entry
CFI10_01350 CDS
T07136
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mgeo
Marinobacterium iners
Pathway
mgeo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mgeo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CFI10_01350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgeo03021
]
CFI10_01350
03400 DNA repair and recombination proteins [BR:
mgeo03400
]
CFI10_01350
Enzymes [BR:
mgeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CFI10_01350
Transcription machinery [BR:
mgeo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CFI10_01350
DNA repair and recombination proteins [BR:
mgeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CFI10_01350
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
DUF7285
Motif
Other DBs
NCBI-ProteinID:
QSR33648
LinkDB
All DBs
Position
273196..274200
Genome browser
AA seq
334 aa
AA seq
DB search
MQRSVNEFLYPRHIDVQEISKTRAKVTLEPLERGFGHTLGNALRRILLSSMPGCAISEVE
IEGVLHEYSSIEGVQEDVIEILLNLKGVAIALHNGDEALLTLSKSEAGSVTAGDIQLTQD
VEIANPEHVIAHLNPGAALNMQLRVTRGRGYVPADSRNSDEDETRAIGRLQLDASYSPVL
RVSYAVESARVEQRTDLDKLVIDIESNGTIDPEECIRRAATILQQQLVVFVDLEDAGEQT
RAEPNEPEIDPVLLRPVDDLELTVRSANCLKAEQIYYIGDLIQRTEVELLKTPNLGKKSL
TEIKDVLASKGLSLGMRLENWPPASLKGDDKVAS
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttcagtaaacgagtttctttacccgcgtcacattgacgtgcaggagattagc
aaaacccgcgccaaggtgactcttgagccactggagcgagggttcggccataccctgggc
aatgcgctgcgccgtatcctgctctcttccatgccgggttgtgcaatttcggaagttgag
attgagggtgtgttgcacgagtacagcagcatagaaggggtgcaggaggatgtcatcgag
atcctgctgaacctcaaaggtgttgccattgctctgcacaacggtgatgaggcgcttctg
acactctccaagtcagaggcaggttctgtcacggctggcgatattcagctgactcaggac
gttgaaattgccaatcccgaacatgtgattgctcacctgaatccgggtgctgcactgaac
atgcagctgcgcgtgacacgcggccgtggctatgtgccggctgactcacgtaacagcgac
gaggatgaaactcgtgccatcggacgtctgcagctggatgccagctacagccctgttctg
cgcgtgtcctatgcagttgaaagtgcacgtgtagaacagcgcaccgacctggacaagctc
gtgatcgatattgaatccaacggtactatcgatccggaagagtgcatccgtcgtgcggct
accatactgcagcagcagctggtcgtgtttgttgatctggaagacgcgggtgaacagact
cgcgccgagccgaatgagccggagattgatcctgttcttctgcgcccggtcgacgacctg
gagctgactgtacgttccgcgaactgtctgaaagcagagcagatctattatattggtgat
ctgatccagcgcaccgaagtagagctgctgaagactcctaacttgggcaagaagtctctg
accgagatcaaagatgtgctggcatctaaaggtctgtcgcttggcatgcgtctggaaaac
tggcccccggccagtctgaaaggcgatgacaaggttgcctcttga
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