Marinobacterium iners: CFI10_01360
Help
Entry
CFI10_01360 CDS
T07136
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
mgeo
Marinobacterium iners
Pathway
mgeo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mgeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFI10_01360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgeo03400
]
CFI10_01360
DNA repair and recombination proteins [BR:
mgeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFI10_01360
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CFI10_01360
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
AAA_23
DnaJ_CXXCXGXG
AAA_21
Viral_helicase1
cobW
AAA_25
MMR_HSR1
T2SSE
ScfRs
Zn_ribbon_8
Methyltransf_28
DZR
Motif
Other DBs
NCBI-ProteinID:
QSR33650
LinkDB
All DBs
Position
complement(274742..277570)
Genome browser
AA seq
942 aa
AA seq
DB search
MDKILVRGARTHNLKNIDLDIPRDQLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSTY
ARQFLSMMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARAGEPRC
PEHDLPLAAQTVSQMVDQVLALPEGTRVMLLAPVVQGRKGEHLHIISQLRSQGFVRARID
RLVVDLDDAPTLDKKRKHDIEVVVDRIKVREDLQTRLAESFETALELSDGIARIAPMDEG
MEEMVFSARFACPTCGHSIQELEPRLFSFNNPHGACPACDGLGVRQYFDPAKLVQDASLT
LAQGAIRGWDKRSLYYYQQLQAVGQHYGFDLDTPFEKLSEQHRNIILHGSGDDSVDFHYR
NDRGERVKKAHPFEGVINNLERRYRETESESVREDLARYLNMHACPSCNGSRLRADARHV
FIDQRTLPDLVRLPIGQAKEYFEQLELGGKQGEIADKILKEIRERLSFLVNVGLDYLSLE
RSADTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLEHLRDLGNTV
IVVEHDEDAIRMADYLIDIGPGAGVHGGRVIAAGLPQTIMDNPESITGQYLSGKRSIAIP
EQRKPVDSDRILRLIGASGNNLQKVTLEIPVGLMTCVTGVSGSGKSTLINNTLYPVAATA
LNHATTLDAAPYERIEGLDLFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFSGTQEA
RSRGYKPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDICKGKRYNRETLEVKYK
GKSIDEVLQLTVEDAREFFDAIPALARRLQTLIDVGLSYIRLGQAATTLSGGEAQRVKLA
RELSKRDTGKTLYILDEPTTGLHFYDIQQLLNVLDRLRDHGNTIVVIEHNLDVIKTADWI
IDLGPEGGSGGGEIIATGTPETVANVPQSHTGRFLKPMLKSV
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggacaagattctggtacggggtgcacgcacccacaacctgaaaaatattgacctcgat
atcccccgcgaccagttgatcgtcatcacagggctgtcgggatcaggcaagtcctcactc
gccttcgacactctctacgccgaaggacagcgccgctacgtggaatccttgtccacctat
gcacgccagttcctgtcgatgatggaaaagcccgatgtagaccatatcgaaggactgtca
ccggccatatcgatcgagcagaaatccacatcgcataatccccgctcgacagttggtacc
atcaccgagatttacgattacctgcgtctgctctttgcccgagcaggcgaaccgcgctgc
cctgaacatgacttgccgctggcggcacagaccgtcagccagatggttgatcaggtgctc
gcactgcccgaaggcacacgcgtaatgctgttggctcccgtcgtacagggccgcaagggt
gagcacttacatatcatcagccagctgcgcagccagggcttcgtccgcgcccgtatagat
cggctggtggtcgatcttgatgatgccccaacactggacaagaaacgcaaacacgatatt
gaagtggtggttgatcgcatcaaggttcgagaggaccttcaaacccgcttggcagaatca
tttgaaaccgctctggagctgagcgatggcattgccagaattgcccccatggatgagggt
atggaggagatggtgttttcggcacgtttcgcctgcccgacctgtggccacagcattcag
gaactcgagcctcgtttgttctcattcaacaacccccacggcgcctgccctgcctgtgat
ggtcttggggtacgacagtattttgatccagccaaactggtacaggacgcatcactgacc
cttgcacagggtgccatacgtggctgggataagcgaagtctctactattaccaacagctg
caggcggtaggtcaacactacggctttgatctggataccccgtttgagaaactcagcgaa
caacaccgcaatatcattctgcacggcagtggtgatgacagcgtagactttcactaccgt
aatgaccgaggcgaacgcgttaagaaggcgcacccctttgaaggcgtgatcaataatctg
gagcggcgctaccgggaaaccgagtccgaaagcgtacgcgaagacttggctcgctatctc
aacatgcatgcatgcccctcatgcaatggcagccgactgcgtgctgacgcgcgccatgta
tttattgaccaacgcactctgcctgatcttgtacgcctgccgattggtcaggcaaaagag
tactttgaacagcttgaactcggaggcaaacaaggcgagatcgccgacaagattctgaaa
gagattcgtgaacgcctgagttttctggtcaatgtaggactcgactacctatcgcttgaa
cgcagtgctgatactctttcaggtggtgaagcccagcgcatccgactggcaagtcagatt
ggtgcaggtctggtcggtgtcatgtatgtactggatgagccatccatcggactgcatcaa
cgcgacaatgaacgtctgctcaaaactctggaacacctgcgtgacctgggcaataccgtc
atcgtagttgaacacgatgaagacgccatccgcatggcggattatctgattgatatcggc
cccggagccggcgtacatggcgggcgtgtcatcgccgcgggcctgccccagaccattatg
gacaatcccgaatcgatcacaggccagtatctgtccggcaaacggtcgattgcgataccg
gaacaacgcaagccggtggacagtgacaggatactgcgtctgataggcgccagcggcaac
aacctgcagaaggtgacgctcgaaattcctgttggactgatgacctgtgtgaccggcgtg
tcgggttccggcaaatccacattgatcaacaacacgttgtacccggttgccgccacggca
cttaatcatgcgacaacgctggacgcggcaccttatgagcggattgaaggattggatctg
tttgacaaggtcatcgatatagaccagagtccgattggacgcactccacgctccaacccc
gcgacctataccggtatttttacaccgatccgtgaactcttttccgggacccaggaagca
cgctcacgcggctacaaaccgggacgtttcagcttcaatgtaaagggtggccgctgtgaa
gcctgccagggggacggcgtaatcaaggtggagatgcacttcctgccggacatctatgtg
ccctgcgatatctgcaagggcaagcgctataaccgtgaaaccctggaagtgaagtacaag
ggcaagagcatcgatgaggtattacagctgacggttgaggatgcgcgtgaattcttcgac
gccataccagcgctggcacgacggctgcaaaccctgatcgatgtcggcctcagctatatt
cgtctcggacaggcagcgacgacactttcgggcggcgaagcacaacgtgtcaaactggcg
cgagaattgagtaagcgggacaccggcaagaccctgtatattcttgacgagcccaccacc
gggctgcatttctatgacatacagcaactgctcaatgtccttgatcgcctgcgggatcac
ggcaataccatcgtcgtgattgaacacaacctggacgtaatcaagaccgccgactggatc
atagacctgggcccggaaggtggcagcggtggtggcgaaatcattgccaccggcacacct
gagaccgttgcaaacgtgccacagtcacataccggacgcttcctgaaacccatgttgaaa
tctgtctga
DBGET
integrated database retrieval system
