Marinobacterium iners: CFI10_02060
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Entry
CFI10_02060 CDS
T07136
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
mgeo
Marinobacterium iners
Brite
KEGG Orthology (KO) [BR:
mgeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mgeo01002
]
CFI10_02060
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mgeo01011
]
CFI10_02060
Peptidases and inhibitors [BR:
mgeo01002
]
Cysteine peptidases
Family C82
CFI10_02060
Peptidoglycan biosynthesis and degradation proteins [BR:
mgeo01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
CFI10_02060
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
QSR33780
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All DBs
Position
412296..413975
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AA seq
559 aa
AA seq
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MLRAVSQRLSALLLLCVIAMPLQAAESVEEHLQQLLQTGAAGELPATDRLDWPALQSLYE
RSGGQLLWSNARGEAKTVMQQELEHWIRASLQHGFDPAHYQYARLQQPFSAGSAMSPEPV
LNDLLLSDSFMRLARDMAGVTPSAEEHDRLWRFQSRTLDAVDLLLQAAAAEEVGATLHAL
LPQSAEYQRLVQHYTQLLQRHERETWVAPDLSMNGLLRTGASHSVVVGVRELLIRKELLS
SAESSFEPQEVYTPLVVDAVRAFQQQQGLEPDGILGPATRAALQRSPEQQLQQVRVNLQR
WRWLPRDLGERYLLVRTGTYSMTLVEQDKAVQQYRIISGRPHRPTLSFESDVDHLIMHPP
WTVPFRLAVEDLLPKQRKDPDYFARQQIEVLQKVDGNWQPVDPEGIDWESLSRRNFPYLL
RQRPGPLNSLGRIRFGMSNPYSIYLHDTPQQTLFESTERAFSSGCIRVDEIEDLAQRLLG
ERSLEQALNISRTHTLRLERPLPVYLVYLTVWVDEQQQGHYHPDVYGLDWQLQQALGPLP
DMPDPKAEPGALAQTVLKE
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgagctgtgagtcaacgtctgtctgcattgctgctgttatgtgtgatcgcaatg
ccgttacaggctgcagaatcggttgaagagcacctgcagcagttgctgcaaacgggtgct
gcaggtgagctgccggcaaccgacaggcttgactggccggcgctgcagtctctgtatgag
cgctccggcgggcagctgctgtggagcaatgcgcgtggcgaagcgaaaacggtgatgcaa
caggagctggaacactggatccgggcatcactgcaacatgggtttgatccggcacattat
cagtatgcgcgactgcagcagccgttttcggccgggtcggccatgagccctgaaccggta
ttgaatgaccttttgttgagtgacagtttcatgcgtctggcgcgggatatggctggcgtg
accccttctgccgaagagcacgaccggctgtggcgtttccaatcccgtacgcttgatgca
gttgacctgttgctgcaggccgccgcggcggaagaggtgggggcaaccctgcatgcactg
ctgccccagtcagccgaatatcagcgtctggttcaacactatacgcagctgttgcagcgg
catgagcgcgagacatgggtggcgccggatttgagcatgaatggcctgctgcgcacgggg
gcgagccactctgtggttgtgggagtgcgtgagttattgattcgcaaggaattgttgagc
tcggcagagagttcgtttgagccgcaggaggtctataccccactggttgtggatgcggta
agggcgttccagcagcagcagggactggaacccgacggtattctggggcctgcgacccgc
gcagcgctacagcgctcgccggagcagcagctgcagcaggtacgggtcaacctgcagcgc
tggcgctggctgccaagggacctgggcgaacgttacctgctggtcagaaccgggacctac
tcaatgacactggttgaacaggacaaagcggtgcagcaataccgaattatcagtggtcgt
ccgcaccgtcctaccctgtcgttcgagtcggacgtggaccaccttatcatgcacccaccc
tggacggtgcccttccgcctggctgttgaggatctgttacccaagcagcgaaaggatccc
gactattttgctcgccaacagatcgaggtactgcagaaggtggatggcaactggcagccg
gttgaccccgaggggattgattgggagagtctgtcgcgccgaaattttccatatctgttg
cggcagcgccccggccccttgaacagcctggggcgtatacgcttcggcatgtcaaacccc
tacagtatttacctgcacgatacaccgcagcagacgctgttcgagtccaccgagcgggcg
ttcagctcaggctgtattcgagtggacgaaattgaagaccttgcccagcggctgctgggt
gagcgctctttggagcaggcattgaacatctcccgcacccacacgctcaggcttgagcgg
ccgctgccggtatatctggtttatctgaccgtctgggtggatgagcaacagcaggggcac
tatcaccccgatgtgtacgggctggactggcagttgcagcaggcattggggccgctgccg
gacatgcctgatccaaaggccgagccaggtgcgctggcacaaactgtgcttaaagagtag
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