Marinobacterium iners: CFI10_03500
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Entry
CFI10_03500 CDS
T07136
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mgeo
Marinobacterium iners
Brite
KEGG Orthology (KO) [BR:
mgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mgeo03016
]
CFI10_03500
Enzymes [BR:
mgeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
CFI10_03500
Transfer RNA biogenesis [BR:
mgeo03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
CFI10_03500
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Paralog
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Acb1
Corona_NS2A
Motif
Other DBs
NCBI-ProteinID:
QSR34058
LinkDB
All DBs
Position
714549..715118
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AA seq
189 aa
AA seq
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MNLRTFFALPVPERIARPLSDCADTLCAYDRGLDAHWVDSANYHLTLCFTGEVTLDQVTE
LEQLCRERLKQQGSFMVQLDRLAYYKANPRLAVLAALTSESEPLMALHRQMVEIAKEAGI
RYDERDFKPHITLARLPASNRFEVPDCWPQPGLTTPADSVVLFQSRPGERGSIYTPLFEV
HLSACNQAL
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgagaacattttttgcgttgccggtacccgagcgaattgcacggccgctgtcc
gactgtgccgatacgctctgtgcctatgatcgaggcctggatgcccactgggtcgactcg
gccaactatcatctgacactctgttttacaggtgaagtgacactggatcaggttaccgag
ttggagcagctttgccgtgagaggcttaagcagcagggaagctttatggtgcaactggat
cggttggcttattacaaggccaatccgcgtctggccgtgctggcagcgttgacgagcgaa
agcgagccattgatggcgctgcaccggcagatggtcgagatcgccaaggaagctggaatt
cggtatgatgaacgcgatttcaaacctcatattacgctggctcgtttgccggccagtaac
cggttcgaagtgcccgactgctggccacaaccgggactgaccacgccggcggattcagtg
gtgctgtttcagagccgcccgggtgagcgtggctccatttacacacccctgtttgaggtt
cacctgtctgcctgcaaccaggccctataa
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