Marinobacterium iners: CFI10_04155
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Entry
CFI10_04155 CDS
T07136
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mgeo
Marinobacterium iners
Pathway
mgeo03420
Nucleotide excision repair
mgeo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mgeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFI10_04155
03430 Mismatch repair
CFI10_04155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgeo03400
]
CFI10_04155
Enzymes [BR:
mgeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFI10_04155
DNA repair and recombination proteins [BR:
mgeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFI10_04155
MMR (mismatch excision repair)
Other MMR factors
CFI10_04155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_22
DEAD
ResIII
RNase_H_2
PhoH
Motif
Other DBs
NCBI-ProteinID:
QSR34186
LinkDB
All DBs
Position
complement(860327..862204)
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AA seq
625 aa
AA seq
DB search
MLQPTDEQQAVIQHDKGHALVCAVPGSGKTATLINRVQYLLNTGVPAEKILVLMFNRQAS
QEFKSRLDFTLSFAESPEVMTFHGLGFKALEQLSKLGHIEKRSLANNHDLMRYVRQGVAH
HTRKLDRKARQLFSKADILVKKTLTQIEQGLSMPSEPLSTLLKSKLQSRLGLDQWMSFNI
ARSVLDALSAKGLITYRMMLTEPVRLAQEQQLVAPILRGYSHILVDEYQDINFDQIQMLR
LLISEHTALMAVGDMDQCIYEWRGAQPDYMLDEHFSQEFPGYTRYALTRTFRYGASLCTA
ANNLIDHNLKRLPLVSTPHDDSLETQVCVVRGKRAMADEISDWYKNGVTDQSAVLYRYWA
DTIPLQLSLAGKGYPFRVSSKERSLFNNRPMKALSAWLHIAAEGKASLDDLISVFSFPTL
MIKKETLRGLILQLLQGQSGESVAAQLDLAQQLPFAQRWSCVQQWVQIDSSEPVEPKLKS
LQSTLGWAAALMDEGDTEEANEQLKEMDAVILDAAGRRRLTILQLHTELSSLANNNHNQD
GLLIATIHATKGLEWDNVILDGLEASRFPRDDDKGDRLIEEERRLFYVGMTRARKRLVCV
LPDSSEPSQFLAEAGLFSITPETGV
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagccaacggatgagcaacaagcagtaatccagcatgataaaggtcatgccttg
gtttgtgcggtccccggttcaggcaaaacagccacgctgatcaacagggtgcaatacttg
ctgaacaccggggtgcctgctgaaaagattctggttttaatgttcaaccggcaggcatct
caagaatttaaatcacggctcgacttcacattatcatttgctgaaagccctgaggttatg
acttttcatggtcttggcttcaaagcgctggagcagctatcgaagctggggcatatcgaa
aagcgaagcctggccaacaaccatgatctgatgcgatatgtccgtcagggggttgcgcac
cacacacgcaagctggatcgaaaggctcgtcaactgttcagcaaagcggatattctggtc
aaaaaaacgctcacgcagatcgagcagggactgtcgatgccgagcgagccgctgagcaca
ttattaaaatccaaactccagtcccgtttggggctggatcagtggatgagcttcaacata
gcacgctcagttctcgatgcgttgagtgcaaaaggactgataacctatcgcatgatgctc
acagaaccagtgagattggctcaagaacaacaactggtagcccccattttacgcggctac
agccacattctggttgatgagtatcaggatataaacttcgaccagattcaaatgctgcgc
ctgctgatttccgaacatacagcactgatggctgttggagatatggaccagtgcatttat
gaatggcgaggcgctcaacctgactatatgctggatgagcatttttcacaggagtttccg
ggctatacccgctatgcactgacccggacgtttcgttacggggcgtcactctgtacggct
gcaaataatctgattgaccacaatctgaaacgtctgcccctggtttccacgcctcatgac
gactcactggaaacacaggtgtgcgtcgttcgcggcaaacgtgccatggccgatgagatt
tccgactggtacaaaaacggtgtaaccgatcagagtgcggttctgtatcgctattgggcc
gacaccattccgttgcagctatcccttgccggcaaaggctatcctttccgcgtaagctca
aaagagcgcagcttattcaacaatcgccccatgaaggctttaagtgcttggctgcatatc
gccgctgagggtaaagccagtcttgatgatctgatttcggtgttcagctttcctaccttg
atgatcaaaaaggaaacgctgcgtggtctgatattacaactgcttcagggccagtctggt
gagtccgttgcagcccaactggatcttgcgcaacaacttccttttgcacaacgctggtct
tgcgtgcagcagtgggtgcaaattgactcgtccgaaccggttgagccgaagctgaagagc
ttgcaaagcactctcggctgggcagctgcattaatggatgaaggggataccgaagaagca
aacgagcaattaaaggagatggacgctgtcattctagacgcggctggccgcaggcgcctg
acgattcttcagcttcacaccgagctaagcagcctggcaaataataatcacaaccaggat
ggcctgctgattgccaccattcacgccaccaaaggccttgagtgggataacgtgattctg
gatgggctggaggcaagccgatttccgagagatgacgacaagggtgaccggctgatagag
gaagaacggagactgttttacgtgggcatgacgcgggcacgcaaacgtctggtgtgtgtg
ctgcctgactctagtgagccaagtcaatttttagcggaagccgggctcttcagcataacg
ccagaaaccggcgtctaa
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