Marinobacterium iners: CFI10_05655
Help
Entry
CFI10_05655 CDS
T07136
Name
(GenBank) lytic transglycosylase F
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
mgeo
Marinobacterium iners
Brite
KEGG Orthology (KO) [BR:
mgeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mgeo01011
]
CFI10_05655
Enzymes [BR:
mgeo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CFI10_05655
Peptidoglycan biosynthesis and degradation proteins [BR:
mgeo01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CFI10_05655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Lig_chan-Glu_bd
Motif
Other DBs
NCBI-ProteinID:
QSR34479
LinkDB
All DBs
Position
complement(1159792..1161291)
Genome browser
AA seq
499 aa
AA seq
DB search
MFKERKSPHLRELIYSGALISLTLVLAIIGLKTPTQLDAIRNNGVLRVATTNTPMTYFIR
RSEPAGFEYELTKAFADHLGVELELVLPSSFSGLFQVLQERNAHLAAASLTVTRERQQRF
EFSPPYRQSAPVLIYRVRQGNPAPKTPLDLYGRSIGVLKSSSYEELLDQLRQEFPKLRWF
SNPDDTVTDLLDRVHEGSLDYTILDSTVFDAQKSFYPGLKAAFELQPPQPIAWMLNRHHD
GTLKAALQQWFALEETAQLIKTLEERYFSRTNPLNFFDTVSFRRDLEERFLPLYPWFREA
ADASGINWLLLAAIAYQESHWRADAVSPTGVRGIMMLTQAAAAEVGVDDRTDPKQSILGG
AQYLVNVKQKIPERIPEPDHTWFALAGYNVGFGHLEDARILTQKAGKDPDKWQHVREYLP
LLSNPRYYNQTRYGYARGHEPVQYVSNIRKYMELLRWEVDTAGARNLNPDLGSDSDAADT
NESSSEARPLPLSNLPSSL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaagagcggaaatcaccccacctgcgagaactgatctattcgggcgctctgatc
agtctcacgctcgtgctcgccataatcgggctgaaaacgcctacccagctcgatgcgatt
cgcaacaacggtgttctgagggtagccaccaccaatactcccatgacctattttattcgc
cgctccgagccggcagggtttgagtatgaacttaccaaggcatttgctgaccacctgggg
gtggagcttgaactggtcctgccatccagtttctcggggctgtttcaggtcttgcaggag
cgtaacgcccatttggccgctgccagcctgaccgtcacccgcgagcgccagcagcgcttt
gagttttcgcctccctaccgccaaagcgcacccgtgctgatctaccgagtacgacaggga
aatccggcgcccaaaaccccgctggacctttacggacgcagcatcggtgtcctcaaaagc
tcaagttatgaagaactgctggatcaactgcgacaagaattccccaagctgcggtggttc
agtaacccggatgatacggttaccgacctgctcgaccgagtccatgagggcagcctcgac
tacaccattctggattcaaccgtttttgatgcacaaaaatcattctatcccggcctgaaa
gccgcatttgaactgcaaccaccccagcccatcgcctggatgctaaatcgccatcatgac
ggcactctcaaggcagctttgcaacaatggtttgctctggaagaaacagcacaattgatc
aaaaccctcgaggagcgctacttttcacgcaccaatccgcttaacttcttcgatacggtt
tcatttcggagggacctggaagaacgttttctaccactttacccctggttccgtgaagca
gcagacgcaagcgggatcaattggctactgctggcggccatcgcctatcaggagtcacac
tggagagccgatgccgtctcacccacaggcgttcgaggcattatgatgctgacgcaggca
gcggcagctgaggtgggtgttgatgaccgtaccgacccgaagcaaagcattctcggcggt
gctcaatacctggtcaatgtgaagcagaagatccctgagcggatccctgagcccgaccac
acctggtttgcactggcaggctacaacgtggggtttggtcatcttgaagatgcccgcatc
ctgacccagaaagccggcaaggaccccgacaagtggcaacatgtccgcgaatacctgcct
ctattgagcaacccacgctactacaaccaaacgcgctacggctacgcccgagggcatgag
ccggtgcagtacgtcagcaacatccgcaagtatatggagctgttgcgctgggaagtggat
accgccggggcacgcaacctgaacccggaccttggcagcgacagcgatgccgctgacacg
aatgaaagcagctcggaagcgcgccctctgcccttgagcaacctgcccagctcactctga
DBGET
integrated database retrieval system
