Marinobacterium iners: CFI10_07760
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Entry
CFI10_07760 CDS
T07136
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
mgeo
Marinobacterium iners
Brite
KEGG Orthology (KO) [BR:
mgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgeo03400
]
CFI10_07760
DNA repair and recombination proteins [BR:
mgeo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CFI10_07760
Archaeal homologous recombinant proteins
CFI10_07760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
DUF4123
Motif
Other DBs
NCBI-ProteinID:
QSR34888
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All DBs
Position
1612691..1613920
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AA seq
409 aa
AA seq
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MRVLHSSDWHLGRLLYGQKRYDEFAAFLDWMLAQIEHLNVGVLLIAGDLFDTTTPSNRAQ
ALYYRFLHQVARSRCRHVVIIGGNHDSPSFLNAPSGLLKALDVHVVGAACDNPVDEVVLL
KAKNGAPEAIICAVPYLRDRDIRQSEAGESLEDKDRKLVQGIREHYAQVCVAAEELRESL
QVDVPLIGMGHLFAAGGKTLDGDGVRDLYVGSLAQVGVDAFPDCLDYVALGHLHVPQAVS
GCEQIRYSGSPLAMGFGEAKQQKSLCLIEFEGRRPQLELIDIPRFQRLERIKGDQAQLSA
ALDKLAQEQTSIWLEVLYEGEQVAADLRDWLEQHTDGTQLTILRVRNNRVVERILARSGE
EETLDDLEPMQVFERALELHQVPETQQDELKRLFGSVLQSMAEQDHRAE
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtgtcctgcacagctccgactggcatctgggccgattactgtacggccagaagcgc
tacgatgaatttgccgcctttcttgactggatgttggcacagatcgagcatctgaatgtc
ggggtactgctgatcgccggcgacctgtttgataccactaccccgagcaaccgggcgcag
gcgctttattaccgctttctgcaccaggtggcgcgctcgcgctgtcgtcatgtggtgatc
attggcggcaatcatgattctcccagctttttgaatgcaccgtccggtttgctcaaggcg
ctggatgtgcatgtggtcggtgctgcctgtgacaatccggtagatgaagtggtattgctg
aaagccaaaaatggcgcacctgaagcaattatctgtgccgttccttacctgcgtgatcgt
gatattcgccagagcgaagcgggcgaaagccttgaggacaaggaccggaaactggtgcag
ggcattcgtgagcattatgcgcaggtctgtgtcgctgccgaagagctgcgagagtcactg
caggtggatgtgccgctgatcggcatgggccatctgtttgccgctggtggcaaaacgctt
gatggcgatggggtgcgtgatctttatgtgggatctctggcgcaggtgggtgtggatgcc
tttcccgattgccttgattatgtggcactggggcacctgcatgtacctcaggccgtgtcg
ggctgcgagcagattcgttacagtggctcaccgctggccatgggatttggggaagcgaaa
caacagaaaagcctgtgcctgatcgagtttgaaggacgtcgcccacagcttgaattgatc
gatatcccgcgttttcaaaggctggagcggatcaagggtgatcaggctcaactgagtgcc
gcactggacaagctggcgcaggagcaaacctcgatctggctggaagtgctgtacgaaggc
gagcaggtggcagccgacctgcgcgactggctggaacagcataccgatggcacccagctg
accatactgagggtccgcaacaaccgggtagtggagcgcattctggcgcgcagcggtgaa
gaggagacgctggatgatctggagccgatgcaagtattcgagcgtgcgcttgaactgcat
caggtacccgagacgcaacaggatgaactgaagcgtctgtttggcagcgtgctgcaatcc
atggccgagcaggaccatcgtgccgaatag
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