Marinobacterium iners: CFI10_08580
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Entry
CFI10_08580 CDS
T07136
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
mgeo
Marinobacterium iners
Brite
KEGG Orthology (KO) [BR:
mgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgeo03032
]
CFI10_08580
03036 Chromosome and associated proteins [BR:
mgeo03036
]
CFI10_08580
03400 DNA repair and recombination proteins [BR:
mgeo03400
]
CFI10_08580
DNA replication proteins [BR:
mgeo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CFI10_08580
Chromosome and associated proteins [BR:
mgeo03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CFI10_08580
DNA repair and recombination proteins [BR:
mgeo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CFI10_08580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-DNA_bdg
FIMAH
DUF2267
Nup214_FG
Barstar
Motif
Other DBs
NCBI-ProteinID:
QSR35050
LinkDB
All DBs
Position
1800324..1800599
Genome browser
AA seq
91 aa
AA seq
DB search
MNKSELIDAIAASADIPKAAAGRALDATLDAVTEALQRGESVALVGFGTFSTKERAARTG
RNPQTGNPIEIAAATLPTFKPGKALKDAVNK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtctgaactgattgacgctattgctgcatctgctgatattccgaaagcagct
gcaggccgtgcactggatgccaccctggatgcggtcactgaagctctgcagcgcggtgaa
tccgttgctctggtaggttttggtactttctccaccaaagagcgtgccgcacgtaccggc
cgcaacccgcagactggcaacccgattgaaattgctgctgcaaccctgccgactttcaag
ccgggcaaagcgctgaaagacgcggtcaacaagtaa
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