Marinobacterium iners: CFI10_09540
Help
Entry
CFI10_09540 CDS
T07136
Name
(GenBank) helicase
Organism
mgeo
Marinobacterium iners
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
MZB
DUF559
Motif
Other DBs
NCBI-ProteinID:
QSR35234
LinkDB
All DBs
Position
1994812..2000064
Genome browser
AA seq
1750 aa
AA seq
DB search
MDVFEFRDKLVGDYRDFTRSFIQPKADDICTFLDGEYDGGRYWPSPLIQINPSYVTEGNV
ELLASQGVLSSVTADIFRFGKSATSTGVPATLYKHQRQAIECCQRREPYVLTTGTGSGKS
LSYFIPMVDTIIKDKEVDPTPRIRAIVIYPMNALANSQREELEKFLSDFPDDKRPVSYAR
YTGQENQEERERIMQNPPDIILTNYMMLELLMTRQNERDKAVIRHSQGLQFLVLDELHTY
RGRQGADVAMLVRRVRERMNLDLICIGTSATMATEGTRQERQAKVAEVATKLFGQQVPAA
NIIGETLQRQIPGEMPAGDVLAKALQTPLPTEETFDQLRQHPVAAWVELTLGISFEEGMW
VRAKPKTLEEAAALLSEATAQDSAHCQRYLAQFLLLAYRTRDINDKPLFAFRLHQFISGA
GDLYATLEAPGKRHLDLHGQQFVPGDRNRRFYTVHFCRSCGQEYYPVWHAKDSETGELGF
TPRDIKETAAEEEDTSYGFLMLGHWNEDDYPESWLDFKKEPPKLKPYYSKLKPQEVHVLP
NGAQNLSGTRGFYLPGGFRFCLGCGHAHSSGRDWTRLGSLSAEGRSSATTTLTLSSLRYL
LGAENELADEARKLLGFSDNRQDAALQSGHFNDFIQILLVRAGILASLDQQNGSLLTDRD
LAQHIFTALGLDSDDPSVRADYLQNPDQRIPRMKRDAEEAMRNVLGYRAYHDLRRGWRFT
VPNLEQLGLLEIAYDGLTELTEDDSVWAQSPDMLAKATPDVRYQVCKLVLDVMRKNLCIR
TRYLDHLQHEQWVNLATTHLTEKWQLGNARDMAKGCHAIIGKRPKGREFDLISLGSRSRL
AQELKKPAIWGNAPFEALNDKNWPALIEALLKALKNYGLIDAEPVDKELEGYQLIGEVLA
WKRGSGTPERDPLAPAVTNNPYFTALYQAVADSLKSQQHDWFQFMAHEHTAQVDPEDREE
RERDFRTGALRVMFCSPTMELGVDISSLNTVYLRNVPPTPANYAQRSGRAGRSGQPALVI
TYCAAQSPHDQYFFREPRRMVHGQVTPPMLDLANEELVSSHLFATWLSETGTRLPAAINE
LIDVTQSSMPINESYAESLANDKALSGAQQRGKRLMRLLGDALAPAGGVWLNSQEPLEVA
ASAWADKRLQQAMGRLDDCFTRWRDLYTSTLKQIEEANRLMTNPASSKRERDIARRRWEE
GSIQFSLLQDNNKRQSDFETYRYLAGQGFLPGYNFPRLPLAAFIPGSRSGRRENHNRVLS
RPRFLAISEFGPLSLIYHEGQQYRVKRVILGAVDQQQITEARLPEQQVRICGHCGYGHFA
EQLNLDLCVACSTPLEGSKMVHNLFRIENVATRPVTRITCDEEERMRQGYDLRTTLQYPE
ENGVLKVVRSDMHQADTLLAEMEYAQQAYIWRINLGWKRRKNKEIDGFMIDPLNGTWLKD
EEQGSNEETEADDPVNQRQRISPFVTDRRNVLVIRPALAMSPTTAATLQYALKRGIELNF
QLEESELMAEPLPDLYERNALLFYEAAEGGAGVLTRLATEPDAWRKVAQTALELMHWERP
DPAVPWHQLPQHQWLDKDSNCEAGCYRCILSYFNQPDHESIDRRDREALEWLAQLTDLKL
TAGSGGHSHADQAAQLKRASGSSLEQAWLDALEQYGLRQPDAAQPYLEAFNMRPDFAYRD
SRAVIFVDGPHHEHPDRRMIDQQQTRDLEDAGFVVLRFPKETARWPALFAQHPDIFGAMP
VTDAVEKSDS
NT seq
5253 nt
NT seq
+upstream
nt +downstream
nt
atggatgttttcgagttcagggacaagctggttggagattatcgtgacttcacccgttct
ttcattcagcccaaggctgacgatatctgcaccttcctggacggtgaatacgatggcggc
cgctactggccatcaccactgattcagatcaacccgtcctatgtcactgaaggcaacgtc
gaactacttgcctctcagggtgttctcagcagcgttaccgcagacatcttccgctttgga
aaatcggcaacgtctaccggtgtgcctgcaacgctttacaagcaccagcgccaggccatc
gagtgctgccaacgacgtgagccctatgttttgaccaccggtacaggctcgggcaagtcg
ctgtcttactttatcccaatggtagacaccatcatcaaggataaagaagtcgatccgacc
ccgcgcattcgtgccattgtcatctacccgatgaacgccttggccaacagtcagcgcgaa
gagctggaaaagttcctgtctgacttccctgatgacaaacgccccgtcagctatgcccgc
tataccggacaggagaatcaggaagagcgtgagcggatcatgcagaacccgcccgacatc
atcctgaccaactatatgatgttggaactgctgatgacccgccaaaacgagcgggacaag
gcggttattcgacattctcaggggctgcagttcctggtacttgatgagctgcatacctat
cgcggccgtcagggtgctgatgttgccatgctggtaagacgtgtacgcgagcggatgaat
ctcgacctgatctgtatcggcacctccgctaccatggcaaccgaaggcacacgccaggaa
cgtcaagctaaggttgctgaagtggcaaccaagctatttggtcagcaagtaccggcggcc
aatatcattggtgaaacgctacagcgccagattcccggtgaaatgccggctggcgatgtg
ttggcgaaggcgctacagacgccactgccaaccgaagaaacgtttgatcaactgcgccag
catccggttgctgcctgggtcgaattaaccctgggcatctcatttgaagaaggtatgtgg
gtgcgcgccaagccgaaaaccctggaagaggcagctgcattgctgagcgaagcaacagcg
caggattcggcacattgccagcgttacttggctcagttcctgttacttgcctatcgaact
cgtgacataaacgacaagcccttgtttgctttcaggttgcaccagttcatctcgggagcc
ggtgacctctatgcaacgcttgaagcacccggaaagcgccaccttgacctgcacgggcaa
caattcgtgccaggtgaccgtaaccgccgcttctataccgttcacttctgccgtagctgt
ggccaggagtattatcctgtctggcatgctaaggactctgaaaccggtgaacttggtttc
acgccacgcgatatcaaggagaccgcagccgaagaagaggacacctcctacggcttcctg
atgctggggcattggaatgaagacgattacccggaaagctggctcgacttcaagaaagaa
ccgcccaagctgaagccctactactccaagcttaagccgcaggaagttcatgtattgcca
aacggcgcgcagaacctaagcggcacacgcgggttctacctgcccggtggtttccgattc
tgcctcggttgtggccatgcgcatagctcaggtcgtgactggacacggcttggatcgctg
tctgcagaaggtcgtagttccgcaacaaccacactcacgctttcatcccttcgttacctg
ctgggtgccgagaatgagctggcagacgaagcgcgcaaactgctcgggttcagtgacaac
cgtcaggatgcggcgctgcagtccggccatttcaatgacttcatccaaattctgctggta
cgcgcaggtatacttgcctccttggatcagcaaaacggcagtctgctgacagaccgtgat
ctggcacagcatatatttactgcactggggttggacagtgatgaccccagcgtgcgcgcc
gactacctgcagaatcccgatcagcgcataccacgcatgaaacgtgatgctgaagaggcc
atgcgtaatgtgctggggtatcgcgcctaccacgatctgcggcggggctggcgctttacc
gtcccgaaccttgaacagctgggtttgctcgaaatcgcctatgacggactgacagaactg
acagaagatgacagcgtgtgggcccagtcgccggatatgttggctaaagccacgccggac
gtgcgttatcaggtctgtaaactcgtattggatgtgatgcgtaaaaacctgtgcatccgt
acccgttatctggaccacctccagcacgaacaatgggtgaacctggcaaccacacatctg
actgagaaatggcagctgggtaatgcccgtgatatggccaaaggttgccatgccattatt
ggtaagcggccaaaagggcgggagtttgatttgatctccctcggtagccgttctcgcttg
gcgcaggagttgaagaagcccgcaatctggggcaacgccccctttgaagcgctgaatgat
aaaaactggcctgcactgattgaagcattgcttaaggctctgaaaaactatggtctcatt
gacgctgagcctgtcgataaagaactcgaaggctatcagctcatcggtgaggtactggcc
tggaagcgcggcagcggcacgcccgaacgtgatccgctggcgccagcggtaaccaacaac
ccctacttcactgcgctctatcaggccgtagcggatagcctcaaaagccagcaacacgac
tggttccagtttatggcccatgaacataccgctcaggtcgatccggaagaccgggaagag
cgtgagcgtgacttccgcacgggtgcgctgagagtcatgttctgctcacccaccatggag
ctgggcgtcgatatcagttcacttaatacggtgtatctgcgtaacgtaccgccgacgcca
gccaactacgcacagcgtagtggacgtgccgggcgctcaggacagcctgcactggtgatt
acctactgcgctgcccaaagtccgcatgaccagtactttttccgtgaaccccgacgtatg
gtgcacggtcaggtaacacccccaatgcttgatttggccaatgaagagctggtctccagt
catctgttcgccacctggctatccgaaaccggcacgcgcctgcctgccgcaattaatgaa
ttgattgacgttactcagtccagcatgccgatcaacgagagctatgctgaatcactggcc
aatgacaaagcactcagcggcgcccaacagcgtggcaaacgcctgatgcgtctgctcggt
gatgcgctggcgcctgcagggggggtttggctcaacagtcaggaaccgctggaagtggcg
gcaagtgcctgggctgacaagcgcctgcagcaagcgatgggacggctggatgactgcttt
acccgttggcgagatctctatacctcaacacttaaacagatcgaagaagccaaccgtttg
atgaccaacccggccagcagcaagcgcgaacgtgatattgcgcgcaggcgctgggaagaa
ggctctatccagttcagcctgctgcaggacaacaacaagcgccagtctgactttgagacc
taccgttacctggccggtcagggttttttgcctggctacaacttcccgcgtttgccgctc
gcagcattcatcccaggcagtcgcagtgggcggcgtgaaaaccataaccgggtactgtct
cgccctcgctttctggctatttccgagtttggtccactgagcttgatttaccacgaaggc
cagcagtaccgcgtcaagcgcgttattctcggagctgtcgatcagcaacagattacagag
gcccgcctgcccgagcagcaagtacgcatctgtggtcattgtggttatgggcatttcgcc
gagcaattgaacctggatctctgtgtggcctgcagtacaccactggaaggcagcaaaatg
gtgcacaacctcttccgcattgaaaacgtggcgacccgtccggtaacacgtattacctgc
gacgaagaagagcgtatgcgccagggttatgacctgcgtactaccctgcagtacccggaa
gagaacggtgtgctgaaagtcgtgcgcagtgatatgcaccaggccgataccctgctggct
gaaatggagtatgcccagcaagcctacatttggcgcatcaacctgggttggaagcgacgc
aaaaacaaggaaattgacgggttcatgatcgacccgctcaacggcacttggctgaaggac
gaagaacagggcagcaatgaagaaacagaagccgatgatccggtcaaccagcgtcagcgc
atctcaccgttcgtgaccgatcgacgtaatgtgttggttattcgccctgcccttgccatg
tcaccgacaaccgctgcaactctgcaatatgcgctcaagcgcggcattgagctgaacttc
cagctggaagaaagcgaactgatggcagagcccctaccggacctgtatgaacgtaacgcc
ctgctattttatgaagccgccgaaggcggtgcgggtgtactgactcgacttgcgactgaa
ccggacgcctggcgcaaagtggcgcagacagctctcgagctcatgcattgggaacgacca
gacccagccgtaccctggcatcaactgccacaacaccaatggctggataaagacagtaac
tgtgaagcaggctgttatcgctgcattctcagctatttcaaccagcctgatcacgaaagc
atcgaccggcgcgaccgcgaggcgcttgaatggctcgcgcaactgaccgaccttaaactt
acggccggttccggtgggcacagccatgctgaccaggctgcgcaacttaaacgtgctagt
ggcagcagccttgaacaagcctggctcgatgcccttgagcagtatggactgcgccagccg
gatgcggcccaaccctatctggaagcgttcaacatgcgtcccgactttgcctatcgtgac
agccgtgccgtcatatttgtggatggtccacatcacgaacatcctgaccgccgcatgatc
gatcagcaacaaacccgtgatctggaagacgccggtttcgttgtgttgcgcttccccaaa
gaaactgcacgctggcccgccctctttgcccagcaccccgatattttcggtgcaatgccc
gttactgatgccgtggagaaatctgattcatga
DBGET
integrated database retrieval system
