Marinobacterium iners: CFI10_10530
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Entry
CFI10_10530 CDS
T07136
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mgeo
Marinobacterium iners
Brite
KEGG Orthology (KO) [BR:
mgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgeo03032
]
CFI10_10530 (topA)
03400 DNA repair and recombination proteins [BR:
mgeo03400
]
CFI10_10530 (topA)
Enzymes [BR:
mgeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CFI10_10530 (topA)
DNA replication proteins [BR:
mgeo03032
]
Prokaryotic type
DNA Topoisomerases
CFI10_10530 (topA)
DNA repair and recombination proteins [BR:
mgeo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CFI10_10530 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
DUF2399
Ribosomal_L10
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QSR35425
LinkDB
All DBs
Position
complement(2197534..2200167)
Genome browser
AA seq
877 aa
AA seq
DB search
MGKTLVIVESPAKAKTINKYLGSQYVVKSSVGHIRDLPTSGSASKSDPKERARQAALTRK
MSPDEKAVYKKRKSQEQLVARMGVDPEHDWEAHYEILPGKEKVVEELRKLAKNADEIYLA
TDLDREGEAIAWHLREAIGGDDSRFRRVVFNEITKKAIQEAFSQPSDLDLNRVNAQQARR
FLDRVVGYMLSPLLWEKIARGLSAGRVQSVAVRLIVEREREIRAFIPDEYWEVHADSETQ
AQQALRLQVSKYAGKTFRPESQAETETHLERLRNGALAVRAREDRPTSSKPSAPFITSTL
QQAASTRLSFGVKKTMMMAQRLYEAGYITYMRTDSTNLSAEAVEACREFIAEQYGKEYLP
EEPVSYSSKEGAQEAHEAIRPSDVNLTVDALKGMEPDAQRLYDLIRRQFLACQMMPALYT
STRITVESGDYELTTKGRILRFDGYTRALPAKGRSDEDVILPDVAQGEVLALKSLDPKQH
FTKPAPRYSEASLVKELEKRGIGRPSTYASIISTIQDRGYVQVQGRRFYACKMGDIVTER
LNENFSDLMDYSFTARMEQRLDDVAQGEVNWKELLNQFYSGFTDKLQEAQSADHGMRPNS
PTPTDIDCPECGRKMMIRTASTGVFLGCSGYNLPPKERCKCTINLIPGDEVVSVDGDDEE
ESRILRNKHRCKLCDAAMDSYLIDEKRKLHVCGNNPDCPGFEVEQGSFRIKGYDGPSIEC
DKCGSEMQLKTGRFGKFFGCTNSECKNTRKLLKNGEPAPPKMDPVPMPELQCEKVEDTYV
LRDGASGLFLAASQFPKKRETRAPLVAELVPHRDEIDPKYAYLMDAPQKDPDGNPAVIRY
SRKTKEQYVMTEVEGKATGWKAFYRDGRWQEEQGRKR
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaaccctagtcattgtcgaatcaccggcaaaggccaaaacgatcaacaagtat
ctgggcagccagtatgttgtcaaatcgagtgtgggtcatattcgcgacctgccaaccagc
ggcagtgccagcaagagcgatcccaaggaacgggcgcgtcaggcagccttgacgcgcaaa
atgtcgccggatgagaaggcggtctataaaaagcggaagtctcaggagcaactggtagcg
cgtatgggggtcgatcccgagcatgactgggaagcccactacgaaattcttcccggcaag
gaaaaggtcgttgaagagctgcgcaagctggccaaaaacgctgatgaaatctacctcgca
acggacttggaccgcgaaggggaggcgattgcctggcatttgcgcgaggcgatcggaggt
gatgacagtcgattccggcgcgtagtttttaacgaaattaccaagaaggcgattcaggag
gcgttttcccagccgagcgatctggaccttaatcgtgtcaacgcccagcaggcacggcgt
tttctggaccgggttgtgggctatatgctgtcacctctgctgtgggagaagatcgcccgt
ggcctctcggccggacgggtacagtccgttgctgtgcgcctgatcgtcgaacgtgaacgc
gaaatccgtgccttcatacctgatgaatactgggaagtgcatgccgactcggaaacacag
gcccagcaggcgctgcggcttcaggtcagcaaatatgccggcaagacattccgtccagag
agtcaggccgaaaccgagacccatctggagcgccttcgcaacggtgcactggctgtgcgt
gcgcgcgaggaccgccccaccagcagcaagccgtcggcgccattcattacctctacactg
caacaggctgccagtacgcggctgagctttggcgtcaagaaaaccatgatgatggctcag
cggttgtatgaagcgggctatatcacctacatgcgtaccgactcgactaacctcagcgcc
gaagcggtggaggcgtgccgtgagtttattgctgaacagtacggcaaggagtacctgccg
gaagagccggtcagctactcaagcaaggaaggggctcaggaggcgcacgaagcgattcgg
ccttctgatgtaaatctgacggttgatgctctcaagggcatggagccggatgcccagcgc
ctgtatgacctgattcggcgtcagttcctggcttgtcagatgatgcctgcactgtacacg
agcacccgtattaccgttgaaagtggtgattacgagcttactaccaaaggtcgtattctg
cgttttgacggttatactcgcgcgttgccggccaaggggcgcagtgacgaagatgtcatt
ctgccggatgtagcgcagggcgaagtgctggcgctcaagtcgctggacccgaagcagcac
tttaccaagccggcaccacgctacagcgaagccagtctggtcaaggagcttgaaaagcgt
ggtattggtcgtccttccacgtatgcctccatcatttcaacaattcaggatcgcggctat
gtacaggtgcaggggcgtcgtttctatgcctgcaaaatgggtgacattgtcaccgagcga
ttgaacgagaatttctccgatctgatggattacagtttcaccgcgcgtatggagcagcgt
cttgatgacgtggcgcagggtgaggtgaactggaaggagctgttgaatcagttctacagc
ggctttaccgacaagctgcaggaggcgcaaagtgctgaccacggcatgaggcccaacagt
ccgacgccgacagatattgattgccccgaatgcggtcgcaagatgatgatcagaacggca
agtacgggcgtgttcctgggctgctctggctataacctgccgcccaaggagcgctgtaag
tgcaccatcaacctgataccaggcgacgaagtggtcagtgtggatggagatgatgaagaa
gagtcccgcatcttgcgcaacaaacatcgttgcaagctgtgtgatgcggcgatggactcc
tacctgatcgatgagaagcgcaagctgcacgtgtgcggcaacaatcccgactgtcctggt
ttcgaggttgaacagggtagcttcaggatcaagggctatgatgggcccagtatcgaatgc
gacaagtgcggctccgaaatgcagcttaagaccggtcgtttcggcaagtttttcggttgc
accaatagcgagtgcaagaatacgcgcaaactgctgaaaaacggtgagccggcgcctccc
aaaatggatccggtaccaatgccggaactgcagtgcgaaaaggttgaagatacctacgta
ctgcgtgatggtgccagcggcctgttcctggcggcgagtcagtttccgaaaaaacgggaa
acgcgtgcgccgctggtggctgagctggtgccgcaccgtgatgagatcgatcccaaatac
gcctatctgatggatgcgccgcagaaagaccctgatggtaatccggcagtaattcgttac
agtcggaaaaccaaagagcagtatgtgatgacggaagttgagggcaaggcaaccggctgg
aaagcgttctaccgtgacgggcgctggcaggaagagcagggacgtaagcgctga
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