Marinobacterium iners: CFI10_10975
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Entry
CFI10_10975 CDS
T07136
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
mgeo
Marinobacterium iners
Pathway
mgeo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mgeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFI10_10975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgeo03400
]
CFI10_10975
DNA repair and recombination proteins [BR:
mgeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFI10_10975
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CFI10_10975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
DALR_1
AAA_22
UB2H
AAA_5
Kinesin
Motif
Other DBs
NCBI-ProteinID:
QSR35512
LinkDB
All DBs
Position
complement(2295020..2297032)
Genome browser
AA seq
670 aa
AA seq
DB search
MKQRFRVQSAFAPAGDQPKAISELVDGLESGLAAQTLLGVTGSGKTFTIANVIAAVQRPT
IIMAHNKTLAAQLYGEFKEFFPDNAVEYFVSYYDYYQPEAYVPASDTFIEKDASINDHIE
QMRLSATKALLERDDAIIVATVSAIYGLGDPKSYLSMMLHLDRGDVIDQRDLLRRLAELQ
YTRNDIEFHRGTYRVRGDVIDVYPAESDRDAIRIELFGDEVDQIAWFDPLTGEVLRKVPR
ATIYPKTHYVTPRETLLEATEHIKEELRERLKQLRDNNKLVEAQRLEQRTLYDIEMIMEL
GYCSGIENYSRYLSGRDPGQAPPTLFDYLPDSALLVLDESHVTVPQIGAMYRGDRSRKET
LVEYGFRLPSALDNRPMKFEEWEQQAPQMIFVSATPSKYEAANAQQIVEQVVRPTGLVDP
QVEVRPAINQVDDLLTEINLVVARKERVIVTVLTKRMAEDLTEYLAEHNVRVRYLHSDID
TVERVEIIRDLRIGEFDVLVGINLLREGIDMPEVSLVTILDADKEGFLRSETSMIQTIGR
AARNVNGRAILYADRMTGSMQRAIDETERRRNKQIAFNAEHGITPRGISKSVADIMEGAS
QIPGKRGKGGARKAAEPDAEYRVDAQLLSPAELAKTITRLEDKMYEAAKNLEFEQAARYR
DELERLKHSG
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagaggttcagagtacagtcggcatttgcgcccgccggcgatcagccgaaggca
atcagtgagctggttgacgggctggagtcggggcttgcagcccagaccctgttgggcgtg
acaggatcgggtaagaccttcaccattgccaatgtgatcgccgccgtgcagcgccccacc
attatcatggcgcacaacaagacgttggcggcacagctgtatggcgagttcaaggagttc
ttcccggacaatgcggttgaatactttgtctcctattacgattattaccagccggaggcc
tatgtgccggcgtctgatacctttatcgaaaaggacgcctcgatcaatgatcatatcgag
cagatgcgcctgtccgctaccaaggcgctgctggagcgggatgacgccatcatcgtggca
acggtatctgccatttatggtttgggcgaccccaagtcctatctgtcgatgatgctccac
ctggacagaggcgatgtgatcgatcagcgtgatctgttgcgcaggctggcagagctgcag
tacacccgcaacgatatcgaattccatcgtggtacctatcgagtacgcggtgacgtgatt
gatgtgtacccggctgaatcggacagggacgccatccgtattgagctgtttggtgacgag
gtggatcagatcgcctggttcgatcccttgaccggcgaagtcttgcgcaaggtgccacgc
gctaccatctaccccaaaacccactacgtcacaccgcgtgaaaccctgcttgaagccacc
gaacatatcaaggaggagttgcgcgagcggctgaagcagctgcgcgacaacaataagctg
gtggaagcacagcgacttgaacagcgtaccctgtacgatattgaaatgatcatggagctg
ggctattgctccggcatcgaaaattactcgcgctacctgtccgggcgtgatcccgggcag
gcgccgcccaccctgttcgattacctgcctgacagtgcgctgctggtgctcgacgagtct
catgtcaccgtgccgcagatcggcgccatgtataggggcgaccgctcgcgcaaggaaacc
ctggttgaatacggtttcaggctgccttcagcgctggacaaccggccgatgaagtttgag
gaatgggagcaacaggcgccacagatgattttcgtttccgccacgcccagcaagtacgag
gccgcgaatgctcagcagattgtagagcaagtggtacggccgaccggactggtggacccg
caggttgaagtacgtcctgcaatcaatcaggtggatgatctgctgaccgaaatcaacctt
gtggtcgcacgcaaggagcgagtgattgtgactgtgctcaccaagcgaatggctgaggat
ctcactgagtatctggccgagcataatgtgcgggtgcgctatctgcattcggatatcgat
acggttgaacgagtggaaattattcgtgatttgcgcatcggtgaatttgacgtgctggtt
ggtattaacctgttgcgtgaagggatcgacatgccggaggtatcactggtgaccattctg
gatgccgacaaggaaggcttcctgcgttcggaaacctccatgatccagaccatcggtcgc
gcggcgcgtaacgtcaatgggcgtgccatcctttatgctgatcgcatgacaggctcgatg
caacgcgccattgatgaaacggagcggcgtcgcaacaaacagatcgctttcaatgccgag
catggcattacacccagaggcatcagcaagtccgtggctgatatcatggagggtgccagc
cagattcccggcaagcgtggcaagggcggcgcgcgcaaggctgccgaaccggatgccgaa
taccgggttgatgcccagctgctcagccctgcagagctggcaaagaccatcacgcgcctc
gaggacaaaatgtacgaagcggccaaaaatctggagttcgagcaggcagcccgctaccgg
gacgagctggaacgtttgaagcacagcggttga
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