Marinobacterium iners: CFI10_13285
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Entry
CFI10_13285 CDS
T07136
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mgeo
Marinobacterium iners
Brite
KEGG Orthology (KO) [BR:
mgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mgeo03016
]
CFI10_13285 (rnd)
Enzymes [BR:
mgeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CFI10_13285 (rnd)
Transfer RNA biogenesis [BR:
mgeo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CFI10_13285 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
QSR35955
LinkDB
All DBs
Position
complement(2780845..2782026)
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AA seq
393 aa
AA seq
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MTELMQRYDWHRLQQAAASPIWINDTATLMHYCQQWLQLPLIALDTEFMRTETFYPIPGL
IQIADDQGCYLIDPLQVEDMSPLAEVLRAPDVLKVLHAGNEDMELFRHSYGVLPQPLYDT
QVGAAFAGWGFSMGLQRLVAYALEVELGKGETTSDWLQRPLTAEQEHYAALDVAYLPVLA
LMQHEQLEARGRLSWVMEECESIGASVMAADEADPQAYFQRFSQVWHLDDVRRALLRDLS
AWREQTCRERDMSRNRLLRNEMLLEIAERMPQNEQHLDAIIKRGRIMREYGQAIMAIIAA
APESARQNPPAEIDRPLHYVWNKRLKQLRSIGRQAAGANDLLPEILLRKRDLDALIRSRD
AEGHYHLPPSLSGWRKPLVGDALLNRIEQFETS
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgactgaattgatgcagcgttatgactggcatcggctgcaacaggctgcggccagcccg
atctggatcaacgataccgcaacactgatgcattactgccagcagtggctgcagttgccg
ttgatcgcgcttgataccgaattcatgcgtaccgaaaccttctatcccataccgggcctg
atccagatagcggatgaccagggctgttatctgattgacccgcttcaggttgaggacatg
tcaccgctggcagaagtgctgcgtgcgccagatgtgctcaaggttctgcatgccggtaat
gaggatatggagctgtttcgccatagctacggcgtactgccgcagccgctctatgatact
caggtgggcgccgcctttgcgggctgggggttcagtatgggcctgcagcgcttggtagcg
tatgcgcttgaggttgaactgggcaagggcgagaccacctccgattggctgcagcgtcca
cttacggctgaacaggaacattatgcggcactggatgtggcctatttgccagttctggct
ctgatgcagcacgagcagcttgaggcgcgagggcgtctgagctgggtaatggaagagtgc
gaaagcattggtgcaagtgtaatggcggctgatgaagcagacccgcaagcatactttcag
cgcttcagtcaggtatggcatctggatgatgtgcgacgtgccttgctgcgtgatctcagt
gcatggcgggaacaaacctgccgtgagcgcgatatgtctcgcaatcgtctgctgcgtaac
gaaatgctgctggaaatcgctgaacggatgcctcagaacgagcagcatctggatgccatt
atcaagcgtggtcgtatcatgcgtgagtacggacaggcgattatggcaataatcgcggcc
gctcctgaatcggcccgccaaaacccgccggccgagatcgatcgcccgttgcactatgtc
tggaacaaacggctcaagcaattacggtcaattggccgtcaggcggcaggcgcgaatgat
ctcttgcctgaaatactgttgcgcaagcgagaccttgatgcgctcatacgctcacgtgat
gcagaggggcattatcacctgccacccagtctttccggctggcgcaagccactggtgggc
gatgccctgttgaatcgaatcgaacagtttgaaacgagttga
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