Marinobacterium iners: CFI10_14850
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Entry
CFI10_14850 CDS
T07136
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mgeo
Marinobacterium iners
Pathway
mgeo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFI10_14850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgeo03019
]
CFI10_14850
Enzymes [BR:
mgeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CFI10_14850
Messenger RNA biogenesis [BR:
mgeo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CFI10_14850
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
P-loop_SecA
Cas3-like_C_2
adh_short
Motif
Other DBs
NCBI-ProteinID:
QSR36243
LinkDB
All DBs
Position
complement(3093110..3094429)
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AA seq
439 aa
AA seq
DB search
MSAFAELGLCPELVATLTALDHHTPTPIQAQAIPLVLAGHDLIAEAQTGTGKTAGFALPM
IERLGRTPASGDYHPIRGLILTPTRELAQQVGEHTLAYGQLLGMRVISIFGGVRFDNQIR
KMKRGADILVATPGRLLDMLKQKKLSLEQLEMLVFDEADRMLDLGFIGEIRELLTHMPAQ
RQTLLFSATLNDSVEVLADKLLQNPKRVAIAVRNSASKQVKQSAYAVDNADKGDVLSFLI
RGGNWQQTLVFTRTKKRADQLCAQLLEDGISAVAIHGDRTQRERMAALATFTAGEVKVLV
ATDVAARGLDIEALPQVVNYDLPNQPEAYVHRIGRTGRAGLKGWAVSLVSPEERRFLKDI
SALIGKPLQLQPVPVLENGKLIEGGALAEKKANRTGRTRVASSGKKGAQGKKAARQMPQA
QPEPVASNRPGKRPSLFGR
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctttgccgaactgggcctctgccctgaactggttgccaccttgacggcactg
gatcaccacacgccgacgcccattcaggcacaggcgatcccgctggtgctggcgggacat
gacctgattgccgaggcgcagaccggtaccggcaagaccgccggttttgcgctgccgatg
atcgagcgcctcggccgcacgcccgcaagcggtgattaccacccgattcgggggctgatc
ctgacgccgacccgtgagctggcccagcaggtgggtgagcatacgttggcatatggccag
ctgctggggatgcgggtcatctccatcttcggcggtgtgcgcttcgacaaccagatccgc
aagatgaaacgcggagccgatatcctggtggcaacgccggggcggctgctggatatgttg
aagcagaaaaagctgtcgctggaacagttggaaatgctggtgttcgatgaagcggaccgc
atgctggacttgggcttcattggcgagatccgagagttgctgacccatatgccggcgcag
cggcagacactgctgttttccgccacactcaatgactctgtggaggtgttggccgacaaa
ctgctgcagaacccgaaacgggttgcgattgcagtacgcaactcggccagcaaacaggtc
aagcaaagtgcctacgcggtggataatgccgataagggggatgtactcagcttcctgatt
cgtggcggcaactggcagcagacgctggtgtttacgcgtaccaaaaagcgtgcggatcag
ctctgtgcacaactgctggaggatggcatcagcgcggtggcgattcacggtgatcgcacc
cagcgtgagcgcatggccgcgctggccacgtttaccgctggtgaggtaaaagtgctggtg
gccactgatgtggccgcccgagggctggatattgaggcgctgccgcaggtggtcaattac
gatctgccgaatcagcctgaggcctatgtacaccgcatcggccgtaccggccgggcaggt
ttgaagggctgggccgtgtcactggtatcgccggaggaacgacgttttctcaaggatata
tcagccctgatcggcaagccgctgcagctgcagcctgttccggtactggaaaacggcaag
ctgattgaaggtggcgcactggccgagaaaaaggccaaccggaccggtcggacgcgcgta
gcatcatcgggcaaaaaaggtgcacaggggaaaaaagcggcccggcagatgccacaggct
cagccggaaccggtcgcatccaaccgaccgggcaagcgcccctcgctgtttgggcgttaa
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